RNA–Protein interactions for RNA: ENST00000043402.7

RTN4R-201, Transcript of reticulon 4 receptor, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RTN4R, Length 2,157 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4R-201ENST00000043402 NUP133Q8WUM0 1156 aa30.22■■■□□ 2.43
RTN4R-201ENST00000043402 ERCC4Q92889 916 aaPredicted RBP30.22■■■□□ 2.43
RTN4R-201ENST00000043402 A0A087WWV3 80 aa30.21■■■□□ 2.43
RTN4R-201ENST00000043402 USP17L12C9JPN9 530 aa30.21■■■□□ 2.43
RTN4R-201ENST00000043402 USP17L21D6R901 530 aa30.21■■■□□ 2.43
RTN4R-201ENST00000043402 OFD1O75665 1012 aa30.21■■■□□ 2.43
RTN4R-201ENST00000043402 RCAN1P53805 252 aa30.21■■■□□ 2.43
RTN4R-201ENST00000043402 CRACR2BQ8N4Y2 399 aaPredicted RBP30.21■■■□□ 2.43
RTN4R-201ENST00000043402 BCL11BQ9C0K0 894 aaPredicted RBP30.21■■■□□ 2.43
RTN4R-201ENST00000043402 PRDM1O75626 825 aa30.21■■■□□ 2.43
RTN4R-201ENST00000043402 MARCKSP29966 332 aaPredicted RBP30.21■■■□□ 2.43
RTN4R-201ENST00000043402 GRAPQ13588 217 aa30.21■■■□□ 2.43
RTN4R-201ENST00000043402 ENAHQ8N8S7 591 aaPredicted RBP30.21■■■□□ 2.43
RTN4R-201ENST00000043402 CNBD1Q8NA66 436 aa30.21■■■□□ 2.43
RTN4R-201ENST00000043402 GRAPLQ8TC17 118 aaPredicted RBP30.21■■■□□ 2.43
RTN4R-201ENST00000043402 MAP3K14Q99558 947 aa30.21■■■□□ 2.43
RTN4R-201ENST00000043402 TTC12Q9H892 705 aaPredicted RBP30.21■■■□□ 2.43
RTN4R-201ENST00000043402 GNL2Q13823 731 aaKnown RBP30.2■■■□□ 2.43
RTN4R-201ENST00000043402 PTPAQ15257 358 aa30.2■■■□□ 2.43
RTN4R-201ENST00000043402 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP30.2■■■□□ 2.42
RTN4R-201ENST00000043402 CAVIN2O95810 425 aa30.2■■■□□ 2.42
RTN4R-201ENST00000043402 IQCB1Q15051 598 aa30.2■■■□□ 2.42
RTN4R-201ENST00000043402 ZSCAN10Q96SZ4 725 aaPredicted RBP30.2■■■□□ 2.42
RTN4R-201ENST00000043402 DCP1AQ9NPI6 582 aaPredicted RBP30.2■■■□□ 2.42
RTN4R-201ENST00000043402 STX1AQ16623 288 aa30.19■■■□□ 2.42
RTN4R-201ENST00000043402 WASF1Q92558 559 aa30.19■■■□□ 2.42
RTN4R-201ENST00000043402 ANKIB1Q9P2G1 1089 aa30.19■■■□□ 2.42
RTN4R-201ENST00000043402 CCDC196A0A1B0GTZ2 297 aa30.18■■■□□ 2.42
RTN4R-201ENST00000043402 HSPA1LP34931 641 aa30.18■■■□□ 2.42
RTN4R-201ENST00000043402 TRIM22Q8IYM9 498 aa30.18■■■□□ 2.42
RTN4R-201ENST00000043402 CCDC88AQ3V6T2 1871 aa30.18■■■□□ 2.42
RTN4R-201ENST00000043402 MROH7-TTC4A0A0A0MT08 1334 aa30.18■■■□□ 2.42
RTN4R-201ENST00000043402 CMA1P23946 247 aa30.18■■■□□ 2.42
RTN4R-201ENST00000043402 PRR5LQ6MZQ0 368 aa30.18■■■□□ 2.42
RTN4R-201ENST00000043402 TRPC5Q9UL62 973 aaPredicted RBP30.18■■■□□ 2.42
RTN4R-201ENST00000043402 KCNJ14Q9UNX9 436 aa30.18■■■□□ 2.42
RTN4R-201ENST00000043402 ZBTB22O15209 634 aa30.17■■■□□ 2.42
RTN4R-201ENST00000043402 MMP1P03956 469 aa30.17■■■□□ 2.42
RTN4R-201ENST00000043402 SDF4Q9BRK5 362 aa30.17■■■□□ 2.42
RTN4R-201ENST00000043402 BTBD18B2RXH4 712 aa30.17■■■□□ 2.42
RTN4R-201ENST00000043402 SPC24Q8NBT2 197 aa30.17■■■□□ 2.42
RTN4R-201ENST00000043402 UBR3Q6ZT12 1888 aa30.16■■■□□ 2.42
RTN4R-201ENST00000043402 MAST2Q6P0Q8 1798 aa30.16■■■□□ 2.42
RTN4R-201ENST00000043402 CRNKL1Q9BZJ0 848 aaKnown RBP30.16■■■□□ 2.42
RTN4R-201ENST00000043402 DDX52Q9Y2R4 599 aaKnown RBP eCLIP30.16■■■□□ 2.42
RTN4R-201ENST00000043402 PPP6R2O75170 966 aa30.15■■■□□ 2.42
RTN4R-201ENST00000043402 ZNF202O95125 648 aa30.15■■■□□ 2.42
RTN4R-201ENST00000043402 DEXIO95424 95 aa30.15■■■□□ 2.42
RTN4R-201ENST00000043402 PFKFB1P16118 471 aa30.15■■■□□ 2.42
RTN4R-201ENST00000043402 ADRA2BP18089 450 aa30.15■■■□□ 2.42
RTN4R-201ENST00000043402 PCP11498 1178 aaKnown RBP30.15■■■□□ 2.42
RTN4R-201ENST00000043402 NOSTRINQ8IVI9 506 aa30.15■■■□□ 2.42
RTN4R-201ENST00000043402 LEMD3Q9Y2U8 911 aa30.15■■■□□ 2.42
RTN4R-201ENST00000043402 GYS1P13807 737 aa30.14■■■□□ 2.42
RTN4R-201ENST00000043402 DIS3L2Q8IYB7 885 aaKnown RBP30.14■■■□□ 2.42
RTN4R-201ENST00000043402 ATP8A2Q9NTI2 1148 aa30.14■■■□□ 2.42
RTN4R-201ENST00000043402 IFIT1BQ5T764 474 aaKnown RBP30.14■■■□□ 2.41
RTN4R-201ENST00000043402 PLA2G4DQ86XP0 818 aa30.14■■■□□ 2.41
RTN4R-201ENST00000043402 CYP2D6P10635 497 aa30.13■■■□□ 2.41
RTN4R-201ENST00000043402 GPR101Q96P66 508 aaPredicted RBP30.13■■■□□ 2.41
RTN4R-201ENST00000043402 ANO10Q9NW15 660 aa30.13■■■□□ 2.41
RTN4R-201ENST00000043402 MYH6P13533 1939 aa30.13■■■□□ 2.41
RTN4R-201ENST00000043402 KIAA2012Q0VF49 1180 aa30.13■■■□□ 2.41
RTN4R-201ENST00000043402 SHC4Q6S5L8 630 aa30.13■■■□□ 2.41
RTN4R-201ENST00000043402 PDZRN4Q6ZMN7 1036 aaPredicted RBP30.13■■■□□ 2.41
RTN4R-201ENST00000043402 IQCA1Q86XH1 822 aa30.13■■■□□ 2.41
RTN4R-201ENST00000043402 KIAA1468Q9P260 1216 aa30.13■■■□□ 2.41
RTN4R-201ENST00000043402 DLEC1Q9Y238 1755 aa30.12■■■□□ 2.41
RTN4R-201ENST00000043402 XDHP47989 1333 aa30.12■■■□□ 2.41
RTN4R-201ENST00000043402 LAMB1P07942 1786 aa30.12■■■□□ 2.41
RTN4R-201ENST00000043402 TOB1P50616 345 aaPredicted RBP30.12■■■□□ 2.41
RTN4R-201ENST00000043402 FUT2Q10981 343 aa30.12■■■□□ 2.41
RTN4R-201ENST00000043402 DZIP1Q86YF9 867 aaKnown RBP30.12■■■□□ 2.41
RTN4R-201ENST00000043402 SHISA4Q96DD7 197 aa30.12■■■□□ 2.41
RTN4R-201ENST00000043402 KCNF1Q9H3M0 494 aa30.12■■■□□ 2.41
RTN4R-201ENST00000043402 EIF4ENIF1Q9NRA8 985 aaKnown RBP30.12■■■□□ 2.41
RTN4R-201ENST00000043402 ZNF75DP51815 510 aa30.11■■■□□ 2.41
RTN4R-201ENST00000043402 TROAPQ12815 778 aa30.11■■■□□ 2.41
RTN4R-201ENST00000043402 PPP2R5BQ15173 497 aa30.11■■■□□ 2.41
RTN4R-201ENST00000043402 TRIM5Q9C035 493 aa30.11■■■□□ 2.41
RTN4R-201ENST00000043402 KIAA1551Q9HCM1 1747 aa30.11■■■□□ 2.41
RTN4R-201ENST00000043402 ORC4O43929 436 aa30.11■■■□□ 2.41
RTN4R-201ENST00000043402 SPTY2D1Q68D10 685 aaPredicted RBP30.11■■■□□ 2.41
RTN4R-201ENST00000043402 DHX40Q8IX18 779 aaKnown RBP30.11■■■□□ 2.41
RTN4R-201ENST00000043402 CLIC6Q96NY7 704 aa30.11■■■□□ 2.41
RTN4R-201ENST00000043402 RNF26Q9BY78 433 aaPredicted RBP30.11■■■□□ 2.41
RTN4R-201ENST00000043402 HPSEQ9Y251 543 aa30.11■■■□□ 2.41
RTN4R-201ENST00000043402 SAFBQ15424 915 aaKnown RBP eCLIP30.1■■■□□ 2.41
RTN4R-201ENST00000043402 GRIK5Q16478 980 aa30.1■■■□□ 2.41
RTN4R-201ENST00000043402 SBK1Q52WX2 424 aa30.1■■■□□ 2.41
RTN4R-201ENST00000043402 TMED8Q6PL24 325 aaPredicted RBP30.1■■■□□ 2.41
RTN4R-201ENST00000043402 JMYQ8N9B5 988 aa30.1■■■□□ 2.41
RTN4R-201ENST00000043402 FOXP1Q9H334 677 aaPredicted RBP30.1■■■□□ 2.41
RTN4R-201ENST00000043402 NMT2O60551 498 aa30.1■■■□□ 2.41
RTN4R-201ENST00000043402 NR5A1Q13285 461 aa30.1■■■□□ 2.41
RTN4R-201ENST00000043402 CRY2Q49AN0 593 aa30.1■■■□□ 2.41
RTN4R-201ENST00000043402 CATIPQ7Z7H3 387 aa30.1■■■□□ 2.41
RTN4R-201ENST00000043402 CERKQ8TCT0 537 aa30.1■■■□□ 2.41
RTN4R-201ENST00000043402 PKN1Q16512 942 aa30.09■■■□□ 2.41
RTN4R-201ENST00000043402 WDR66Q8TBY9 1149 aa30.09■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms