RNA–Protein interactions for RNA: ENST00000016946.7

RGPD5-201, Transcript of RANBP2-like and GRIP domain containing 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGPD5, Length 7,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD5-201ENST00000016946 TRAF5O00463 557 aa12.49□□□□□ -0.41
RGPD5-201ENST00000016946 CIAO1O76071 339 aa12.49□□□□□ -0.41
RGPD5-201ENST00000016946 PRPHP41219 470 aa12.49□□□□□ -0.41
RGPD5-201ENST00000016946 PHKA1P46020 1223 aa12.49□□□□□ -0.41
RGPD5-201ENST00000016946 KIAA0753Q2KHM9 967 aa12.49□□□□□ -0.41
RGPD5-201ENST00000016946 RGS22Q8NE09 1264 aa12.49□□□□□ -0.41
RGPD5-201ENST00000016946 PUS3Q9BZE2 481 aaKnown RBP12.49□□□□□ -0.41
RGPD5-201ENST00000016946 SPC25Q9HBM1 224 aa12.49□□□□□ -0.41
RGPD5-201ENST00000016946 PNMA2Q9UL42 364 aa12.49□□□□□ -0.41
RGPD5-201ENST00000016946 CEP83Q9Y592 693 aa12.49□□□□□ -0.41
RGPD5-201ENST00000016946 UQCRHLA0A096LP55 91 aa12.48□□□□□ -0.41
RGPD5-201ENST00000016946 UQCRHP07919 91 aa12.48□□□□□ -0.41
RGPD5-201ENST00000016946 BLMP54132 1417 aaPredicted RBP12.48□□□□□ -0.41
RGPD5-201ENST00000016946 NLRX1Q86UT6 975 aa12.48□□□□□ -0.41
RGPD5-201ENST00000016946 NEK11Q8NG66 645 aa12.48□□□□□ -0.41
RGPD5-201ENST00000016946 DYDC1Q8WWB3 177 aa12.48□□□□□ -0.41
RGPD5-201ENST00000016946 EXOC7Q9UPT5 735 aa12.48□□□□□ -0.41
RGPD5-201ENST00000016946 FRMD4BQ9Y2L6 1034 aa12.48□□□□□ -0.41
RGPD5-201ENST00000016946 HEG1Q9ULI3 1381 aa12.48□□□□□ -0.41
RGPD5-201ENST00000016946 FAM160A1Q05DH4 1040 aa12.48□□□□□ -0.41
RGPD5-201ENST00000016946 SNX29Q8TEQ0 813 aa12.48□□□□□ -0.41
RGPD5-201ENST00000016946 DDX39AO00148 427 aaKnown RBP12.48□□□□□ -0.41
RGPD5-201ENST00000016946 KIAA0754O94854 1291 aa12.48□□□□□ -0.41
RGPD5-201ENST00000016946 ARID5AQ03989 594 aa12.48□□□□□ -0.41
RGPD5-201ENST00000016946 UBE3CQ15386 1083 aa12.48□□□□□ -0.41
RGPD5-201ENST00000016946 LRRC45Q96CN5 670 aa12.48□□□□□ -0.41
RGPD5-201ENST00000016946 ABCC3O15438 1527 aa12.48□□□□□ -0.41
RGPD5-201ENST00000016946 SNW1Q13573 536 aaKnown RBP12.48□□□□□ -0.41
RGPD5-201ENST00000016946 GNPTABQ3T906 1256 aa12.48□□□□□ -0.41
RGPD5-201ENST00000016946 SPECC1Q5M775 1068 aa12.48□□□□□ -0.41
RGPD5-201ENST00000016946 CCDC91Q7Z6B0 441 aa12.48□□□□□ -0.41
RGPD5-201ENST00000016946 PRAMEF22A3QJZ6 481 aa12.47□□□□□ -0.41
RGPD5-201ENST00000016946 MMP10P09238 476 aa12.47□□□□□ -0.41
RGPD5-201ENST00000016946 DNM2P50570 870 aa12.47□□□□□ -0.41
RGPD5-201ENST00000016946 STRN3Q13033 797 aa12.47□□□□□ -0.41
RGPD5-201ENST00000016946 SDR42E1Q8WUS8 393 aa12.47□□□□□ -0.41
RGPD5-201ENST00000016946 CCDC42Q96M95 316 aa12.47□□□□□ -0.41
RGPD5-201ENST00000016946 TTC12Q9H892 705 aaPredicted RBP12.47□□□□□ -0.41
RGPD5-201ENST00000016946 SEC31BQ9NQW1 1179 aa12.47□□□□□ -0.41
RGPD5-201ENST00000016946 RPS6KA4O75676 772 aa12.47□□□□□ -0.41
RGPD5-201ENST00000016946 PDE4DQ08499 809 aa12.47□□□□□ -0.41
RGPD5-201ENST00000016946 ZNF654Q8IZM8 581 aa12.47□□□□□ -0.41
RGPD5-201ENST00000016946 PHKBQ93100 1093 aa12.47□□□□□ -0.41
RGPD5-201ENST00000016946 HAUS7Q99871 368 aa12.47□□□□□ -0.41
RGPD5-201ENST00000016946 ATP8A2Q9NTI2 1148 aa12.47□□□□□ -0.41
RGPD5-201ENST00000016946 SRP68Q9UHB9 627 aaKnown RBP12.47□□□□□ -0.41
RGPD5-201ENST00000016946 RBM6P78332 1123 aaKnown RBP12.47□□□□□ -0.41
RGPD5-201ENST00000016946 A0A1B0GVL5 298 aa12.47□□□□□ -0.41
RGPD5-201ENST00000016946 NLRP10Q86W26 655 aa12.47□□□□□ -0.41
RGPD5-201ENST00000016946 ALAS1P13196 640 aa12.47□□□□□ -0.41
RGPD5-201ENST00000016946 HSPA4P34932 840 aa12.47□□□□□ -0.41
RGPD5-201ENST00000016946 TYRO3Q06418 890 aa12.47□□□□□ -0.41
RGPD5-201ENST00000016946 DALRD3Q5D0E6 543 aaKnown RBP12.47□□□□□ -0.41
RGPD5-201ENST00000016946 ZSCAN10Q96SZ4 725 aaPredicted RBP12.47□□□□□ -0.41
RGPD5-201ENST00000016946 RBM10P98175 930 aaKnown RBP12.47□□□□□ -0.41
RGPD5-201ENST00000016946 FMNL3Q8IVF7 1028 aa12.47□□□□□ -0.41
RGPD5-201ENST00000016946 KCNH3Q9ULD8 1083 aa12.47□□□□□ -0.41
RGPD5-201ENST00000016946 LMAN1P49257 510 aa12.46□□□□□ -0.41
RGPD5-201ENST00000016946 DCAF17Q5H9S7 520 aaPredicted RBP12.46□□□□□ -0.41
RGPD5-201ENST00000016946 TM6SF1Q9BZW5 370 aa12.46□□□□□ -0.41
RGPD5-201ENST00000016946 DBNDD1Q9H9R9 158 aa12.46□□□□□ -0.41
RGPD5-201ENST00000016946 PABPN1LA6NDY0 278 aaKnown RBP12.46□□□□□ -0.41
RGPD5-201ENST00000016946 GCOM1H8Y6P7 765 aaPredicted RBP12.46□□□□□ -0.41
RGPD5-201ENST00000016946 MYZAPP0CAP1 466 aa12.46□□□□□ -0.41
RGPD5-201ENST00000016946 UBXN1Q04323 297 aa12.46□□□□□ -0.41
RGPD5-201ENST00000016946 WDR44Q5JSH3 913 aa12.46□□□□□ -0.41
RGPD5-201ENST00000016946 LMBR1Q8WVP7 490 aa12.46□□□□□ -0.41
RGPD5-201ENST00000016946 GLG1Q92896 1179 aa12.46□□□□□ -0.41
RGPD5-201ENST00000016946 M0QZ92 97 aa12.46□□□□□ -0.41
RGPD5-201ENST00000016946 CYP27B1O15528 508 aa12.46□□□□□ -0.41
RGPD5-201ENST00000016946 EPB41P11171 864 aaKnown RBP12.46□□□□□ -0.41
RGPD5-201ENST00000016946 CLEC4GQ6UXB4 293 aa12.46□□□□□ -0.41
RGPD5-201ENST00000016946 CNNM4Q6P4Q7 775 aa12.46□□□□□ -0.42
RGPD5-201ENST00000016946 PNMA1Q8ND90 353 aa12.46□□□□□ -0.42
RGPD5-201ENST00000016946 CCDC17Q96LX7 622 aa12.46□□□□□ -0.42
RGPD5-201ENST00000016946 DNM3Q9UQ16 869 aa12.46□□□□□ -0.42
RGPD5-201ENST00000016946 MAP3K4Q9Y6R4 1608 aa12.46□□□□□ -0.42
RGPD5-201ENST00000016946 A2ML1A8K2U0 1454 aa12.46□□□□□ -0.42
RGPD5-201ENST00000016946 EEF2P13639 858 aaKnown RBP12.46□□□□□ -0.42
RGPD5-201ENST00000016946 PTGS1P23219 599 aa12.46□□□□□ -0.42
RGPD5-201ENST00000016946 TNKSO95271 1327 aa12.45□□□□□ -0.42
RGPD5-201ENST00000016946 RNF123Q5XPI4 1314 aa12.45□□□□□ -0.42
RGPD5-201ENST00000016946 SMCO2A6NFE2 343 aa12.45□□□□□ -0.42
RGPD5-201ENST00000016946 POTEB2H3BUK9 544 aa12.45□□□□□ -0.42
RGPD5-201ENST00000016946 CEP135Q66GS9 1140 aa12.45□□□□□ -0.42
RGPD5-201ENST00000016946 GADL1Q6ZQY3 521 aa12.45□□□□□ -0.42
RGPD5-201ENST00000016946 TRIM6Q9C030 488 aaPredicted RBP12.45□□□□□ -0.42
RGPD5-201ENST00000016946 ZCCHC11Q5TAX3 1644 aaKnown RBP12.45□□□□□ -0.42
RGPD5-201ENST00000016946 hCG_1642624A0A1W2PR95 340 aa12.45□□□□□ -0.42
RGPD5-201ENST00000016946 CLRN2A0PK11 232 aa12.45□□□□□ -0.42
RGPD5-201ENST00000016946 NPR1P16066 1061 aa12.45□□□□□ -0.42
RGPD5-201ENST00000016946 KRT83P78385 493 aa12.45□□□□□ -0.42
RGPD5-201ENST00000016946 TTLL6Q8N841 843 aa12.45□□□□□ -0.42
RGPD5-201ENST00000016946 ARAP3Q8WWN8 1544 aa12.45□□□□□ -0.42
RGPD5-201ENST00000016946 A0A0D9SFI3 127 aa12.45□□□□□ -0.42
RGPD5-201ENST00000016946 TACC1O75410 805 aa12.45□□□□□ -0.42
RGPD5-201ENST00000016946 MCTP2Q6DN12 878 aa12.45□□□□□ -0.42
RGPD5-201ENST00000016946 KCNJ14Q9UNX9 436 aa12.45□□□□□ -0.42
RGPD5-201ENST00000016946 MRPL11Q9Y3B7 192 aaKnown RBP12.45□□□□□ -0.42
RGPD5-201ENST00000016946 SEC24BO95487 1268 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms