RNA–Protein interactions for RNA: ENST00000006053.6

CX3CL1-201, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CX3CL1, Length 3,321 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-201ENST00000006053 GUCY1A2P33402 732 aa12.02□□□□□ -0.49
CX3CL1-201ENST00000006053 SMC1AQ14683 1233 aaKnown RBP12.02□□□□□ -0.49
CX3CL1-201ENST00000006053 SAFBQ15424 915 aaKnown RBP eCLIP12.02□□□□□ -0.49
CX3CL1-201ENST00000006053 KLHL10Q6JEL2 608 aa12.02□□□□□ -0.49
CX3CL1-201ENST00000006053 CMTR1Q8N1G2 835 aaKnown RBP12.02□□□□□ -0.49
CX3CL1-201ENST00000006053 GPR161Q8N6U8 529 aaKnown RBP12.02□□□□□ -0.49
CX3CL1-201ENST00000006053 CNNM1Q9NRU3 951 aa12.02□□□□□ -0.49
CX3CL1-201ENST00000006053 MRFAP1Q9Y605 127 aa12.02□□□□□ -0.49
CX3CL1-201ENST00000006053 WDR19Q8NEZ3 1342 aa12.01□□□□□ -0.49
CX3CL1-201ENST00000006053 GYS2P54840 703 aa12.01□□□□□ -0.49
CX3CL1-201ENST00000006053 CTDSPL2Q05D32 466 aa12.01□□□□□ -0.49
CX3CL1-201ENST00000006053 NTRK3Q16288 839 aa12.01□□□□□ -0.49
CX3CL1-201ENST00000006053 DIS3L2Q8IYB7 885 aaKnown RBP12.01□□□□□ -0.49
CX3CL1-201ENST00000006053 ZKSCAN3Q9BRR0 538 aa12.01□□□□□ -0.49
CX3CL1-201ENST00000006053 PIH1D3Q9NQM4 214 aaKnown RBP12.01□□□□□ -0.49
CX3CL1-201ENST00000006053 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.01□□□□□ -0.49
CX3CL1-201ENST00000006053 GPTP24298 496 aa12.01□□□□□ -0.49
CX3CL1-201ENST00000006053 TBX2Q13207 712 aaPredicted RBP12.01□□□□□ -0.49
CX3CL1-201ENST00000006053 NOSTRINQ8IVI9 506 aa12.01□□□□□ -0.49
CX3CL1-201ENST00000006053 AIDAQ96BJ3 306 aa12.01□□□□□ -0.49
CX3CL1-201ENST00000006053 TSPYL1Q9H0U9 437 aa12.01□□□□□ -0.49
CX3CL1-201ENST00000006053 FAM217BQ9NTX9 383 aaPredicted RBP12.01□□□□□ -0.49
CX3CL1-201ENST00000006053 CAMTA1Q9Y6Y1 1673 aa12.01□□□□□ -0.49
CX3CL1-201ENST00000006053 FAM237AA0A1B0GTK4 181 aa12.01□□□□□ -0.49
CX3CL1-201ENST00000006053 NUTM2BA6NNL0 878 aaPredicted RBP12.01□□□□□ -0.49
CX3CL1-201ENST00000006053 NUTM2EB1AL46 878 aaPredicted RBP12.01□□□□□ -0.49
CX3CL1-201ENST00000006053 PSEN1P49768 467 aa12.01□□□□□ -0.49
CX3CL1-201ENST00000006053 STX17P56962 302 aa12.01□□□□□ -0.49
CX3CL1-201ENST00000006053 TCIRG1Q13488 830 aa12.01□□□□□ -0.49
CX3CL1-201ENST00000006053 NUTM2AQ8IVF1 878 aaPredicted RBP12.01□□□□□ -0.49
CX3CL1-201ENST00000006053 IGDCC4Q8TDY8 1250 aa12.01□□□□□ -0.49
CX3CL1-201ENST00000006053 TMEM87BQ96K49 555 aa12.01□□□□□ -0.49
CX3CL1-201ENST00000006053 LY9Q9HBG7 655 aa12.01□□□□□ -0.49
CX3CL1-201ENST00000006053 RAI14Q9P0K7 980 aa12.01□□□□□ -0.49
CX3CL1-201ENST00000006053 PUF60Q9UHX1 559 aaKnown RBP12.01□□□□□ -0.49
CX3CL1-201ENST00000006053 WWC3Q9ULE0 1092 aa12.01□□□□□ -0.49
CX3CL1-201ENST00000006053 LMTK3Q96Q04 1460 aa12□□□□□ -0.49
CX3CL1-201ENST00000006053 SOWAHDA6NJG2 315 aa12□□□□□ -0.49
CX3CL1-201ENST00000006053 MYO1BO43795 1136 aa12□□□□□ -0.49
CX3CL1-201ENST00000006053 GOLGA1Q92805 767 aa12□□□□□ -0.49
CX3CL1-201ENST00000006053 MRPL44Q9H9J2 332 aaKnown RBP12□□□□□ -0.49
CX3CL1-201ENST00000006053 DACH1Q9UI36 760 aa12□□□□□ -0.49
CX3CL1-201ENST00000006053 MDM2Q00987 491 aaPredicted RBP12□□□□□ -0.49
CX3CL1-201ENST00000006053 NR5A1Q13285 461 aa12□□□□□ -0.49
CX3CL1-201ENST00000006053 ISCA1Q9BUE6 129 aa12□□□□□ -0.49
CX3CL1-201ENST00000006053 RSPH14Q9UHP6 348 aa12□□□□□ -0.49
CX3CL1-201ENST00000006053 FEZ2Q9UHY8 353 aaPredicted RBP12□□□□□ -0.49
CX3CL1-201ENST00000006053 TBC1D2BQ9UPU7 963 aa12□□□□□ -0.49
CX3CL1-201ENST00000006053 TULP2O00295 520 aa11.99□□□□□ -0.49
CX3CL1-201ENST00000006053 TEX33O43247 280 aa11.99□□□□□ -0.49
CX3CL1-201ENST00000006053 TOB1P50616 345 aaPredicted RBP11.99□□□□□ -0.49
CX3CL1-201ENST00000006053 GTF2A1P52655 376 aaPredicted RBP11.99□□□□□ -0.49
CX3CL1-201ENST00000006053 USP49Q70CQ1 688 aa11.99□□□□□ -0.49
CX3CL1-201ENST00000006053 MLKLQ8NB16 471 aa11.99□□□□□ -0.49
CX3CL1-201ENST00000006053 ENOX1Q8TC92 643 aaKnown RBP11.99□□□□□ -0.49
CX3CL1-201ENST00000006053 KIFC2Q96AC6 838 aa11.99□□□□□ -0.49
CX3CL1-201ENST00000006053 NAPBQ9H115 298 aa11.99□□□□□ -0.49
CX3CL1-201ENST00000006053 ZSWIM5Q9P217 1185 aa11.99□□□□□ -0.49
CX3CL1-201ENST00000006053 PCDHB6Q9Y5E3 794 aa11.99□□□□□ -0.49
CX3CL1-201ENST00000006053 A0A0U1RQJ8 604 aa11.99□□□□□ -0.49
CX3CL1-201ENST00000006053 PDE6AP16499 860 aa11.99□□□□□ -0.49
CX3CL1-201ENST00000006053 ITGA6P23229 1130 aa11.99□□□□□ -0.49
CX3CL1-201ENST00000006053 AFMP43652 599 aa11.99□□□□□ -0.49
CX3CL1-201ENST00000006053 MMP14P50281 582 aa11.99□□□□□ -0.49
CX3CL1-201ENST00000006053 NUP133Q8WUM0 1156 aa11.99□□□□□ -0.49
CX3CL1-201ENST00000006053 ATRIPQ8WXE1 791 aa11.99□□□□□ -0.49
CX3CL1-201ENST00000006053 PRDM11Q9NQV5 511 aa11.99□□□□□ -0.49
CX3CL1-201ENST00000006053 AKR1B15C9JRZ8 316 aaPredicted RBP11.99□□□□□ -0.49
CX3CL1-201ENST00000006053 ATP8B1O43520 1251 aa11.99□□□□□ -0.49
CX3CL1-201ENST00000006053 CCDC175P0C221 793 aa11.99□□□□□ -0.49
CX3CL1-201ENST00000006053 ZNF18P17022 549 aa11.99□□□□□ -0.49
CX3CL1-201ENST00000006053 PHKA1P46020 1223 aa11.99□□□□□ -0.49
CX3CL1-201ENST00000006053 EVA1CP58658 441 aa11.99□□□□□ -0.49
CX3CL1-201ENST00000006053 GPS2Q13227 327 aa11.99□□□□□ -0.49
CX3CL1-201ENST00000006053 RSRC2Q7L4I2 434 aaKnown RBP11.99□□□□□ -0.49
CX3CL1-201ENST00000006053 TRIM22Q8IYM9 498 aa11.99□□□□□ -0.49
CX3CL1-201ENST00000006053 HELBQ8NG08 1087 aaPredicted RBP11.99□□□□□ -0.49
CX3CL1-201ENST00000006053 ZCRB1Q8TBF4 217 aaKnown RBP11.99□□□□□ -0.49
CX3CL1-201ENST00000006053 RABGGTAQ92696 567 aa11.99□□□□□ -0.49
CX3CL1-201ENST00000006053 GREM2Q9H772 168 aa11.99□□□□□ -0.49
CX3CL1-201ENST00000006053 PTPREP23469 700 aa11.98□□□□□ -0.49
CX3CL1-201ENST00000006053 CASP1P29466 404 aa11.98□□□□□ -0.49
CX3CL1-201ENST00000006053 TOM1L2Q6ZVM7 507 aa11.98□□□□□ -0.49
CX3CL1-201ENST00000006053 PPFIBP1Q86W92 1011 aa11.98□□□□□ -0.49
CX3CL1-201ENST00000006053 MED15Q96RN5 788 aa11.98□□□□□ -0.49
CX3CL1-201ENST00000006053 SEC31BQ9NQW1 1179 aa11.98□□□□□ -0.49
CX3CL1-201ENST00000006053 FBXO2Q9UK22 296 aaPredicted RBP11.98□□□□□ -0.49
CX3CL1-201ENST00000006053 MMP1P03956 469 aa11.98□□□□□ -0.49
CX3CL1-201ENST00000006053 MORC3Q14149 939 aa11.98□□□□□ -0.49
CX3CL1-201ENST00000006053 TTF1Q15361 905 aaPredicted RBP11.98□□□□□ -0.49
CX3CL1-201ENST00000006053 LONRF2Q1L5Z9 754 aa11.98□□□□□ -0.49
CX3CL1-201ENST00000006053 TXLNBQ8N3L3 684 aa11.98□□□□□ -0.49
CX3CL1-201ENST00000006053 TEX13AQ9BXU3 409 aaPredicted RBP11.98□□□□□ -0.49
CX3CL1-201ENST00000006053 GEMIN8Q9NWZ8 242 aaKnown RBP11.98□□□□□ -0.49
CX3CL1-201ENST00000006053 C1orf167Q5SNV9 1468 aa11.98□□□□□ -0.49
CX3CL1-201ENST00000006053 FMNL1O95466 1100 aaPredicted RBP11.98□□□□□ -0.49
CX3CL1-201ENST00000006053 TXLNAP40222 546 aa11.98□□□□□ -0.49
CX3CL1-201ENST00000006053 CHMP4BP1P59074 171 aa11.98□□□□□ -0.49
CX3CL1-201ENST00000006053 MCM6Q14566 821 aa11.98□□□□□ -0.49
CX3CL1-201ENST00000006053 KIF6Q6ZMV9 814 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms