RNA–Protein interactions for RNA: ENSMUST00000210774.1

Ebf3-208, Transcript of Transcription factor COE3, mousemouse

TSL 1 (best) BASIC

Gene Ebf3, Length 2,994 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3-208ENSMUST00000210774 Tcp11Q01755 566 aa16.67■□□□□ 0.26
Ebf3-208ENSMUST00000210774 Gsdma2Q32M21 443 aa16.67■□□□□ 0.26
Ebf3-208ENSMUST00000210774 Spag7Q7TNE3 227 aaKnown RBP16.67■□□□□ 0.26
Ebf3-208ENSMUST00000210774 Srek1Q8BZX4 494 aaKnown RBP16.67■□□□□ 0.26
Ebf3-208ENSMUST00000210774 Lrrc42Q8R2U7 421 aa16.67■□□□□ 0.26
Ebf3-208ENSMUST00000210774 Baiap2l1Q9DBJ3 514 aa16.67■□□□□ 0.26
Ebf3-208ENSMUST00000210774 Actn2Q9JI91 894 aa16.67■□□□□ 0.26
Ebf3-208ENSMUST00000210774 ErmapQ9JLN5 566 aa16.67■□□□□ 0.26
Ebf3-208ENSMUST00000210774 Rbbp8nlA2ABX0 614 aa16.67■□□□□ 0.26
Ebf3-208ENSMUST00000210774 Zscan20B2KFW1 1030 aa16.67■□□□□ 0.26
Ebf3-208ENSMUST00000210774 Gm21671G3UY31 267 aa16.67■□□□□ 0.26
Ebf3-208ENSMUST00000210774 Dapk3O54784 448 aa16.67■□□□□ 0.26
Ebf3-208ENSMUST00000210774 NpeppsQ11011 920 aa16.67■□□□□ 0.26
Ebf3-208ENSMUST00000210774 Emc10Q3TAS6 258 aa16.67■□□□□ 0.26
Ebf3-208ENSMUST00000210774 Tab3Q571K4 716 aa16.67■□□□□ 0.26
Ebf3-208ENSMUST00000210774 Naa25Q8BWZ3 972 aa16.67■□□□□ 0.26
Ebf3-208ENSMUST00000210774 Sugp2Q8CH09 1067 aa16.67■□□□□ 0.26
Ebf3-208ENSMUST00000210774 Surf6P70279 355 aaKnown RBP16.66■□□□□ 0.26
Ebf3-208ENSMUST00000210774 RubcnlQ3TD16 648 aa16.66■□□□□ 0.26
Ebf3-208ENSMUST00000210774 Kdm7aQ3UWM4 940 aa16.66■□□□□ 0.26
Ebf3-208ENSMUST00000210774 Prl2c1Q5SVL9 228 aa16.66■□□□□ 0.26
Ebf3-208ENSMUST00000210774 Mybpc2Q5XKE0 1136 aa16.66■□□□□ 0.26
Ebf3-208ENSMUST00000210774 Pcdhb14Q6PB90 796 aa16.66■□□□□ 0.26
Ebf3-208ENSMUST00000210774 Ankib1Q6ZPS6 1085 aa16.66■□□□□ 0.26
Ebf3-208ENSMUST00000210774 Sox30Q8CGW4 782 aa16.66■□□□□ 0.26
Ebf3-208ENSMUST00000210774 Sf3a3Q9D554 501 aaKnown RBP16.66■□□□□ 0.26
Ebf3-208ENSMUST00000210774 Entpd5Q9WUZ9 427 aa16.66■□□□□ 0.26
Ebf3-208ENSMUST00000210774 DccP70211 1447 aa16.66■□□□□ 0.26
Ebf3-208ENSMUST00000210774 Arfgef2A2A5R2 1792 aa16.66■□□□□ 0.26
Ebf3-208ENSMUST00000210774 Pnpla7A2AJ88 1352 aa16.66■□□□□ 0.26
Ebf3-208ENSMUST00000210774 Rexo5D3YW29 759 aa16.66■□□□□ 0.26
Ebf3-208ENSMUST00000210774 Mybl1P51960 751 aa16.66■□□□□ 0.26
Ebf3-208ENSMUST00000210774 Slc12a2P55012 1205 aa16.66■□□□□ 0.26
Ebf3-208ENSMUST00000210774 Ezh2Q61188 746 aaKnown RBP16.66■□□□□ 0.26
Ebf3-208ENSMUST00000210774 Ptcd1Q8C2E4 695 aaKnown RBP16.66■□□□□ 0.26
Ebf3-208ENSMUST00000210774 Bicc1Q99MQ1 977 aaKnown RBP16.66■□□□□ 0.26
Ebf3-208ENSMUST00000210774 Fam84aQ9D650 292 aa16.66■□□□□ 0.26
Ebf3-208ENSMUST00000210774 Klhl40Q9D783 621 aa16.66■□□□□ 0.26
Ebf3-208ENSMUST00000210774 Pik3c2aQ61194 1686 aa16.66■□□□□ 0.26
Ebf3-208ENSMUST00000210774 Ubr1O70481 1757 aa16.65■□□□□ 0.26
Ebf3-208ENSMUST00000210774 Rad17Q6NXW6 688 aa16.65■□□□□ 0.26
Ebf3-208ENSMUST00000210774 Clic6Q8BHB9 596 aa16.65■□□□□ 0.26
Ebf3-208ENSMUST00000210774 Riok3Q9DBU3 519 aaKnown RBP16.65■□□□□ 0.26
Ebf3-208ENSMUST00000210774 Wdr17E9Q271 1322 aa16.65■□□□□ 0.26
Ebf3-208ENSMUST00000210774 Tmed8Q3UHI4 326 aa16.65■□□□□ 0.26
Ebf3-208ENSMUST00000210774 Map3k2Q61083 619 aa16.65■□□□□ 0.26
Ebf3-208ENSMUST00000210774 Gkap1Q9JMB0 366 aa16.65■□□□□ 0.26
Ebf3-208ENSMUST00000210774 Sipa1l2Q80TE4 1722 aa16.65■□□□□ 0.26
Ebf3-208ENSMUST00000210774 Atp8b5A3FIN4 1183 aa16.65■□□□□ 0.26
Ebf3-208ENSMUST00000210774 Atf5O70191 283 aa16.65■□□□□ 0.26
Ebf3-208ENSMUST00000210774 Cplx1P63040 134 aa16.65■□□□□ 0.26
Ebf3-208ENSMUST00000210774 Cct6aP80317 531 aaKnown RBP16.65■□□□□ 0.26
Ebf3-208ENSMUST00000210774 Iws1Q8C1D8 766 aa16.65■□□□□ 0.26
Ebf3-208ENSMUST00000210774 Fermt3Q8K1B8 665 aa16.65■□□□□ 0.26
Ebf3-208ENSMUST00000210774 E2f4Q8R0K9 410 aa16.65■□□□□ 0.26
Ebf3-208ENSMUST00000210774 BrapQ99MP8 591 aa16.65■□□□□ 0.26
Ebf3-208ENSMUST00000210774 Yeats4Q9CR11 227 aaKnown RBP16.65■□□□□ 0.26
Ebf3-208ENSMUST00000210774 Hspa2P17156 633 aa16.64■□□□□ 0.25
Ebf3-208ENSMUST00000210774 Grin1P35438 938 aa16.64■□□□□ 0.25
Ebf3-208ENSMUST00000210774 Nab2Q61127 525 aa16.64■□□□□ 0.25
Ebf3-208ENSMUST00000210774 Sh3gl3Q62421 347 aa16.64■□□□□ 0.25
Ebf3-208ENSMUST00000210774 Spty2d1Q68FG3 682 aa16.64■□□□□ 0.25
Ebf3-208ENSMUST00000210774 Luc7l2Q7TNC4 392 aaKnown RBP16.64■□□□□ 0.25
Ebf3-208ENSMUST00000210774 Nek11Q8C0Q4 628 aa16.64■□□□□ 0.25
Ebf3-208ENSMUST00000210774 ApobrQ8VBT6 942 aa16.64■□□□□ 0.25
Ebf3-208ENSMUST00000210774 Fam50bQ9WTJ8 334 aa16.64■□□□□ 0.25
Ebf3-208ENSMUST00000210774 IncenpQ9WU62 880 aa16.64■□□□□ 0.25
Ebf3-208ENSMUST00000210774 Vmn2r23E9PXI5 849 aa16.64■□□□□ 0.25
Ebf3-208ENSMUST00000210774 Exoc4O35382 975 aa16.64■□□□□ 0.25
Ebf3-208ENSMUST00000210774 Map2k1P31938 393 aa16.64■□□□□ 0.25
Ebf3-208ENSMUST00000210774 Epn1Q80VP1 575 aa16.64■□□□□ 0.25
Ebf3-208ENSMUST00000210774 Chchd3Q9CRB9 227 aaKnown RBP16.64■□□□□ 0.25
Ebf3-208ENSMUST00000210774 Ebag9Q9D0V7 213 aa16.64■□□□□ 0.25
Ebf3-208ENSMUST00000210774 Carmil3Q3UFQ8 1375 aa16.64■□□□□ 0.25
Ebf3-208ENSMUST00000210774 Nck2O55033 380 aa16.63■□□□□ 0.25
Ebf3-208ENSMUST00000210774 Gm28047Q3US59 414 aa16.63■□□□□ 0.25
Ebf3-208ENSMUST00000210774 CoilQ5SU73 570 aa16.63■□□□□ 0.25
Ebf3-208ENSMUST00000210774 Traf3ip3Q8C0G2 513 aa16.63■□□□□ 0.25
Ebf3-208ENSMUST00000210774 PhaxQ9JJT9 385 aaKnown RBP16.63■□□□□ 0.25
Ebf3-208ENSMUST00000210774 Kcnh3Q9WVJ0 1095 aa16.63■□□□□ 0.25
Ebf3-208ENSMUST00000210774 PnnO35691 725 aaKnown RBP16.63■□□□□ 0.25
Ebf3-208ENSMUST00000210774 Hoxa7P02830 229 aa16.63■□□□□ 0.25
Ebf3-208ENSMUST00000210774 Sox5P35710 763 aa16.63■□□□□ 0.25
Ebf3-208ENSMUST00000210774 Gspt2Q149F3 632 aa16.63■□□□□ 0.25
Ebf3-208ENSMUST00000210774 Vil1Q62468 827 aa16.63■□□□□ 0.25
Ebf3-208ENSMUST00000210774 Nlrp4fQ66X05 959 aa16.63■□□□□ 0.25
Ebf3-208ENSMUST00000210774 Ltv1Q6NSQ7 470 aaKnown RBP16.63■□□□□ 0.25
Ebf3-208ENSMUST00000210774 LnpkQ7TQ95 425 aa16.63■□□□□ 0.25
Ebf3-208ENSMUST00000210774 IqcgQ80W32 419 aa16.63■□□□□ 0.25
Ebf3-208ENSMUST00000210774 Usp44Q8C2S0 711 aa16.63■□□□□ 0.25
Ebf3-208ENSMUST00000210774 Kcnq3Q8K3F6 873 aa16.63■□□□□ 0.25
Ebf3-208ENSMUST00000210774 Ascc1Q9D8Z1 356 aaKnown RBP16.63■□□□□ 0.25
Ebf3-208ENSMUST00000210774 CltaO08585 235 aa16.62■□□□□ 0.25
Ebf3-208ENSMUST00000210774 Mnat1P51949 309 aa16.62■□□□□ 0.25
Ebf3-208ENSMUST00000210774 Nek1P51954 1203 aa16.62■□□□□ 0.25
Ebf3-208ENSMUST00000210774 Irak1Q62406 710 aa16.62■□□□□ 0.25
Ebf3-208ENSMUST00000210774 Vipas39Q8BGQ1 491 aa16.62■□□□□ 0.25
Ebf3-208ENSMUST00000210774 Haus7Q8BKT8 364 aa16.62■□□□□ 0.25
Ebf3-208ENSMUST00000210774 Slain2Q8CI08 581 aa16.62■□□□□ 0.25
Ebf3-208ENSMUST00000210774 Phldb2Q8K1N2 1249 aa16.62■□□□□ 0.25
Retrieved 100 of 22,080 RNA–protein pairs in 12.3 ms