RNA–Protein interactions for RNA: ENSMUST00000201549.3

Scn8a-213, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS P5 TSL 5 BASIC

Gene Scn8a, Length 7,120 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-213ENSMUST00000201549 Pcdhb15Q91Y04 786 aa10.3□□□□□ -0.76
Scn8a-213ENSMUST00000201549 Kifc2O08672 792 aa10.3□□□□□ -0.76
Scn8a-213ENSMUST00000201549 Nlrp9aQ66X03 949 aa10.3□□□□□ -0.76
Scn8a-213ENSMUST00000201549 Ccdc105Q9D4K7 499 aa10.3□□□□□ -0.76
Scn8a-213ENSMUST00000201549 Tcerg1lQ3B807 590 aa10.29□□□□□ -0.76
Scn8a-213ENSMUST00000201549 Cd274Q9EP73 290 aa10.29□□□□□ -0.76
Scn8a-213ENSMUST00000201549 Gm5934D3Z4U6 212 aa10.29□□□□□ -0.76
Scn8a-213ENSMUST00000201549 Zdhhc9P59268 364 aa10.29□□□□□ -0.76
Scn8a-213ENSMUST00000201549 Hexim1Q8R409 356 aaKnown RBP10.29□□□□□ -0.76
Scn8a-213ENSMUST00000201549 Otud7bB2RUR8 840 aa10.29□□□□□ -0.76
Scn8a-213ENSMUST00000201549 Mtus1Q5HZI1 1210 aa10.29□□□□□ -0.76
Scn8a-213ENSMUST00000201549 Slc35g1Q8BY79 368 aa10.29□□□□□ -0.76
Scn8a-213ENSMUST00000201549 Frmd4bQ920B0 1035 aa10.29□□□□□ -0.76
Scn8a-213ENSMUST00000201549 EmbP21995 330 aa10.29□□□□□ -0.76
Scn8a-213ENSMUST00000201549 Fermt1P59113 677 aa10.29□□□□□ -0.76
Scn8a-213ENSMUST00000201549 Ovgp1Q62010 721 aa10.29□□□□□ -0.76
Scn8a-213ENSMUST00000201549 Rad17Q6NXW6 688 aa10.29□□□□□ -0.76
Scn8a-213ENSMUST00000201549 Arid5bQ8BM75 1188 aaKnown RBP10.29□□□□□ -0.76
Scn8a-213ENSMUST00000201549 Nod2Q8K3Z0 1020 aa10.29□□□□□ -0.76
Scn8a-213ENSMUST00000201549 Pus3Q9JI38 481 aa10.29□□□□□ -0.76
Scn8a-213ENSMUST00000201549 Gm28510A0A087WP28 240 aa10.29□□□□□ -0.76
Scn8a-213ENSMUST00000201549 Ces1aE9PYP1 563 aa10.29□□□□□ -0.76
Scn8a-213ENSMUST00000201549 Kiaa1328Q6NZK5 612 aa10.29□□□□□ -0.76
Scn8a-213ENSMUST00000201549 Ccdc25Q78PG9 208 aa10.29□□□□□ -0.76
Scn8a-213ENSMUST00000201549 PdclQ9DBX2 301 aa10.29□□□□□ -0.76
Scn8a-213ENSMUST00000201549 Syde2E9PUP1 1314 aa10.29□□□□□ -0.76
Scn8a-213ENSMUST00000201549 Parp14Q2EMV9 1817 aa10.29□□□□□ -0.76
Scn8a-213ENSMUST00000201549 Abca6Q8K441 1624 aa10.29□□□□□ -0.76
Scn8a-213ENSMUST00000201549 Gucy1b3O54865 620 aa10.29□□□□□ -0.76
Scn8a-213ENSMUST00000201549 Snrpa1P57784 255 aaKnown RBP10.29□□□□□ -0.76
Scn8a-213ENSMUST00000201549 Terf1P70371 421 aa10.29□□□□□ -0.76
Scn8a-213ENSMUST00000201549 Kif2bQ8C0N1 668 aa10.29□□□□□ -0.76
Scn8a-213ENSMUST00000201549 Rassf4Q8CB96 322 aa10.29□□□□□ -0.76
Scn8a-213ENSMUST00000201549 Txnrd1Q9JMH6 613 aa10.29□□□□□ -0.76
Scn8a-213ENSMUST00000201549 Calm1P0DP26 149 aaKnown RBP10.28□□□□□ -0.76
Scn8a-213ENSMUST00000201549 Calm2P0DP27 149 aaKnown RBP10.28□□□□□ -0.76
Scn8a-213ENSMUST00000201549 Calm3P0DP28 149 aaKnown RBP10.28□□□□□ -0.76
Scn8a-213ENSMUST00000201549 Ms4a1P19437 291 aa10.28□□□□□ -0.76
Scn8a-213ENSMUST00000201549 DbnlQ62418 436 aa10.28□□□□□ -0.76
Scn8a-213ENSMUST00000201549 Ift74Q8BKE9 600 aa10.28□□□□□ -0.76
Scn8a-213ENSMUST00000201549 Mei4Q8BRM6 389 aa10.28□□□□□ -0.76
Scn8a-213ENSMUST00000201549 Clip2Q9Z0H8 1047 aa10.28□□□□□ -0.76
Scn8a-213ENSMUST00000201549 Atf5O70191 283 aa10.28□□□□□ -0.76
Scn8a-213ENSMUST00000201549 MycP01108 439 aa10.28□□□□□ -0.76
Scn8a-213ENSMUST00000201549 Serpinc1P32261 465 aa10.28□□□□□ -0.76
Scn8a-213ENSMUST00000201549 Eif3j1Q3UGC7 261 aaKnown RBP10.28□□□□□ -0.76
Scn8a-213ENSMUST00000201549 HellsQ60848 821 aa10.28□□□□□ -0.76
Scn8a-213ENSMUST00000201549 MmeQ61391 750 aa10.28□□□□□ -0.76
Scn8a-213ENSMUST00000201549 Sp4Q62445 782 aa10.28□□□□□ -0.76
Scn8a-213ENSMUST00000201549 Eif3j2Q66JS6 263 aa10.28□□□□□ -0.76
Scn8a-213ENSMUST00000201549 Adcy3Q8VHH7 1145 aa10.28□□□□□ -0.76
Scn8a-213ENSMUST00000201549 Tacc2Q9JJG0 1149 aa10.28□□□□□ -0.76
Scn8a-213ENSMUST00000201549 Gm1993A6X8I0 212 aa10.28□□□□□ -0.76
Scn8a-213ENSMUST00000201549 SlxD3Z347 212 aa10.28□□□□□ -0.76
Scn8a-213ENSMUST00000201549 Pak1O88643 545 aa10.28□□□□□ -0.76
Scn8a-213ENSMUST00000201549 Usp28Q5I043 1051 aa10.28□□□□□ -0.76
Scn8a-213ENSMUST00000201549 Add3Q9QYB5 706 aaKnown RBP10.28□□□□□ -0.76
Scn8a-213ENSMUST00000201549 Gm12185Q5NCB2 835 aa10.28□□□□□ -0.76
Scn8a-213ENSMUST00000201549 Asic4Q7TNS7 539 aa10.28□□□□□ -0.76
Scn8a-213ENSMUST00000201549 Acbd3Q8BMP6 525 aa10.28□□□□□ -0.76
Scn8a-213ENSMUST00000201549 Lrrd1Q8C0R9 853 aa10.28□□□□□ -0.76
Scn8a-213ENSMUST00000201549 Dhx30Q99PU8 1217 aaKnown RBP10.28□□□□□ -0.76
Scn8a-213ENSMUST00000201549 Arhgap23Q69ZH9 1483 aa10.28□□□□□ -0.76
Scn8a-213ENSMUST00000201549 Mapkapk5O54992 473 aa10.28□□□□□ -0.76
Scn8a-213ENSMUST00000201549 Krt15Q61414 452 aa10.28□□□□□ -0.76
Scn8a-213ENSMUST00000201549 Znf280dQ68FE8 974 aa10.28□□□□□ -0.76
Scn8a-213ENSMUST00000201549 Sdad1Q80UZ2 687 aaKnown RBP10.28□□□□□ -0.76
Scn8a-213ENSMUST00000201549 Clic6Q8BHB9 596 aa10.28□□□□□ -0.76
Scn8a-213ENSMUST00000201549 NelfbQ8C4Y3 580 aa10.28□□□□□ -0.76
Scn8a-213ENSMUST00000201549 Naa16Q9DBB4 864 aa10.28□□□□□ -0.76
Scn8a-213ENSMUST00000201549 Ppp2r2cQ8BG02 447 aa10.28□□□□□ -0.76
Scn8a-213ENSMUST00000201549 Stx17Q9D0I4 301 aa10.28□□□□□ -0.76
Scn8a-213ENSMUST00000201549 Abcb6Q9DC29 842 aa10.28□□□□□ -0.76
Scn8a-213ENSMUST00000201549 1700018F24RikB2RW27 314 aa10.27□□□□□ -0.76
Scn8a-213ENSMUST00000201549 Prkg1P0C605 671 aa10.27□□□□□ -0.76
Scn8a-213ENSMUST00000201549 Arpp21Q9DCB4 807 aa10.27□□□□□ -0.76
Scn8a-213ENSMUST00000201549 PigbQ9JJQ0 542 aa10.27□□□□□ -0.76
Scn8a-213ENSMUST00000201549 Gm30191A0A0U1RNT7 187 aa10.27□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Krit1Q6S5J6 736 aa10.27□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Ppp2r5dQ91V89 594 aa10.27□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Ttll7A4Q9F0 912 aa10.27□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Zfp213E9QAW0 468 aa10.27□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Evi5P97366 809 aa10.27□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Chmp2aQ9DB34 222 aa10.27□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Erbb4Q61527 1308 aa10.27□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Akap17bA2A3V1 959 aa10.27□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Ccdc85cE9Q6B2 420 aa10.27□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Cplx4Q80WM3 160 aa10.27□□□□□ -0.77
Scn8a-213ENSMUST00000201549 HgsQ99LI8 775 aa10.27□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Six6os1Q9CTN5 574 aa10.27□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Ifi35Q9D8C4 286 aa10.27□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Golga5Q9QYE6 729 aa10.27□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Kdm6aO70546 1401 aa10.27□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Med14A2ABV5 1459 aaKnown RBP10.26□□□□□ -0.77
Scn8a-213ENSMUST00000201549 P2rx5Q3UYI1 455 aa10.26□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Swap70Q6A028 585 aaKnown RBP10.26□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Msl1Q6PDM1 616 aa10.26□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Cep128Q8BI22 1102 aa10.26□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Map7d1A2AJI0 846 aa10.26□□□□□ -0.77
Scn8a-213ENSMUST00000201549 G430095P16RikE9Q913 147 aa10.26□□□□□ -0.77
Retrieved 100 of 22,080 RNA–protein pairs in 26.7 ms