RNA–Protein interactions for RNA: ENSMUST00000106441.7

Trim47-202, Transcript of Tripartite motif-containing protein 47, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim47, Length 2,192 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47-202ENSMUST00000106441 Tpcn2Q8BWC0 731 aa21.06■□□□□ 0.96
Trim47-202ENSMUST00000106441 Myoz2Q9JJW5 264 aa21.06■□□□□ 0.96
Trim47-202ENSMUST00000106441 Myh4Q5SX39 1939 aa21.05■□□□□ 0.96
Trim47-202ENSMUST00000106441 Prl3d1P18121 224 aa21.05■□□□□ 0.96
Trim47-202ENSMUST00000106441 Kif2aP28740 705 aa21.05■□□□□ 0.96
Trim47-202ENSMUST00000106441 Ppfia3P60469 1194 aa21.05■□□□□ 0.96
Trim47-202ENSMUST00000106441 Panx2Q6IMP4 677 aa21.05■□□□□ 0.96
Trim47-202ENSMUST00000106441 Kiaa1524Q8BWY9 907 aa21.05■□□□□ 0.96
Trim47-202ENSMUST00000106441 Jakmip2D3YXK0 820 aa21.04■□□□□ 0.96
Trim47-202ENSMUST00000106441 Csf1rP09581 977 aa21.04■□□□□ 0.96
Trim47-202ENSMUST00000106441 Xpo4Q9ESJ0 1151 aa21.04■□□□□ 0.96
Trim47-202ENSMUST00000106441 Ptf1aQ9QX98 324 aa21.04■□□□□ 0.96
Trim47-202ENSMUST00000106441 Stxbp4Q9WV89 557 aa21.04■□□□□ 0.96
Trim47-202ENSMUST00000106441 Myh7Q91Z83 1935 aa21.04■□□□□ 0.96
Trim47-202ENSMUST00000106441 Ccdc121E9Q6D3 323 aa21.04■□□□□ 0.96
Trim47-202ENSMUST00000106441 Mtx1P47802 317 aa21.04■□□□□ 0.96
Trim47-202ENSMUST00000106441 Vgll3P85442 326 aa21.04■□□□□ 0.96
Trim47-202ENSMUST00000106441 Hand2Q61039 217 aa21.04■□□□□ 0.96
Trim47-202ENSMUST00000106441 Pcdhb22Q91XZ8 794 aa21.04■□□□□ 0.96
Trim47-202ENSMUST00000106441 Odf2lQ9D478 642 aa21.04■□□□□ 0.96
Trim47-202ENSMUST00000106441 Pramel3A2AHA7 463 aa21.03■□□□□ 0.96
Trim47-202ENSMUST00000106441 Gm7903A2AWL1 463 aa21.03■□□□□ 0.96
Trim47-202ENSMUST00000106441 AV320801A2AWL3 467 aa21.03■□□□□ 0.96
Trim47-202ENSMUST00000106441 Izumo3A6PWV3 263 aa21.03■□□□□ 0.96
Trim47-202ENSMUST00000106441 Cyp2c69E9PXC3 491 aa21.03■□□□□ 0.96
Trim47-202ENSMUST00000106441 Gm15023L7MUB4 467 aa21.03■□□□□ 0.96
Trim47-202ENSMUST00000106441 Nedd4P46935 887 aaKnown RBP21.03■□□□□ 0.96
Trim47-202ENSMUST00000106441 Cyp2c40P56657 491 aa21.03■□□□□ 0.96
Trim47-202ENSMUST00000106441 B4galnt4Q766D5 1034 aa21.03■□□□□ 0.96
Trim47-202ENSMUST00000106441 Fsd2Q8BZ52 692 aa21.03■□□□□ 0.96
Trim47-202ENSMUST00000106441 Zfp202Q8C879 641 aa21.03■□□□□ 0.96
Trim47-202ENSMUST00000106441 Shisa4Q8CA71 197 aa21.03■□□□□ 0.96
Trim47-202ENSMUST00000106441 Tubb4aQ9D6F9 444 aa21.03■□□□□ 0.96
Trim47-202ENSMUST00000106441 Arfgef1G3X9K3 1846 aaKnown RBP21.03■□□□□ 0.96
Trim47-202ENSMUST00000106441 Ankrd63A2ARS0 390 aa21.03■□□□□ 0.96
Trim47-202ENSMUST00000106441 Gm20425E9Q035 978 aaKnown RBP21.03■□□□□ 0.96
Trim47-202ENSMUST00000106441 SrprbP47758 269 aa21.03■□□□□ 0.96
Trim47-202ENSMUST00000106441 Sh3bp1P55194 680 aa21.03■□□□□ 0.96
Trim47-202ENSMUST00000106441 Ccdc51Q3URS9 406 aa21.03■□□□□ 0.96
Trim47-202ENSMUST00000106441 Fchsd1Q6PFY1 688 aa21.03■□□□□ 0.96
Trim47-202ENSMUST00000106441 Sept9Q80UG5 583 aa21.03■□□□□ 0.96
Trim47-202ENSMUST00000106441 Znf568E9PYI1 671 aa21.02■□□□□ 0.96
Trim47-202ENSMUST00000106441 HdlbpQ8VDJ3 1268 aaKnown RBP21.02■□□□□ 0.96
Trim47-202ENSMUST00000106441 Hps3Q91VB4 1002 aa21.02■□□□□ 0.96
Trim47-202ENSMUST00000106441 Rbm33Q9CXK9 1231 aaKnown RBP21.02■□□□□ 0.96
Trim47-202ENSMUST00000106441 Pram1Q6BCL1 675 aa21.02■□□□□ 0.95
Trim47-202ENSMUST00000106441 Kri1Q8VDQ9 704 aaKnown RBP21.02■□□□□ 0.95
Trim47-202ENSMUST00000106441 Ube3bQ9ES34 1070 aa21.02■□□□□ 0.95
Trim47-202ENSMUST00000106441 A0A1W2P7S8 802 aa21.01■□□□□ 0.95
Trim47-202ENSMUST00000106441 Gm5592Q3V0A6 857 aa21.01■□□□□ 0.95
Trim47-202ENSMUST00000106441 Cdc5lQ6A068 802 aaKnown RBP21.01■□□□□ 0.95
Trim47-202ENSMUST00000106441 Gpr101Q80T62 511 aa21.01■□□□□ 0.95
Trim47-202ENSMUST00000106441 IqcgQ80W32 419 aa21.01■□□□□ 0.95
Trim47-202ENSMUST00000106441 Map10Q8BJS7 891 aa21.01■□□□□ 0.95
Trim47-202ENSMUST00000106441 WdpcpQ8C456 722 aa21.01■□□□□ 0.95
Trim47-202ENSMUST00000106441 Slc51aQ8R000 340 aa21.01■□□□□ 0.95
Trim47-202ENSMUST00000106441 Ercc3P49135 783 aa21■□□□□ 0.95
Trim47-202ENSMUST00000106441 Pfkfb1P70266 471 aa21■□□□□ 0.95
Trim47-202ENSMUST00000106441 Cdkl5Q3UTQ8 938 aa21■□□□□ 0.95
Trim47-202ENSMUST00000106441 Abcf1Q6P542 837 aaKnown RBP21■□□□□ 0.95
Trim47-202ENSMUST00000106441 Alx1Q8C8B0 326 aa21■□□□□ 0.95
Trim47-202ENSMUST00000106441 Flt1P35969 1333 aa21■□□□□ 0.95
Trim47-202ENSMUST00000106441 Zfp597E9Q6S0 419 aa21■□□□□ 0.95
Trim47-202ENSMUST00000106441 Paxbp1P58501 919 aa21■□□□□ 0.95
Trim47-202ENSMUST00000106441 Il17raQ60943 864 aa21■□□□□ 0.95
Trim47-202ENSMUST00000106441 Filip1Q9CS72 1211 aa21■□□□□ 0.95
Trim47-202ENSMUST00000106441 Letm1Q9Z2I0 738 aa21■□□□□ 0.95
Trim47-202ENSMUST00000106441 Slc7a3P70423 618 aa20.99■□□□□ 0.95
Trim47-202ENSMUST00000106441 Rec8Q8C5S7 591 aa20.99■□□□□ 0.95
Trim47-202ENSMUST00000106441 Myh3P13541 1940 aa20.99■□□□□ 0.95
Trim47-202ENSMUST00000106441 Rbbp6P97868 1790 aaKnown RBP20.99■□□□□ 0.95
Trim47-202ENSMUST00000106441 Prl7d1P04769 244 aa20.99■□□□□ 0.95
Trim47-202ENSMUST00000106441 ArsiQ32KI9 573 aa20.99■□□□□ 0.95
Trim47-202ENSMUST00000106441 Cdc37Q61081 379 aa20.99■□□□□ 0.95
Trim47-202ENSMUST00000106441 Spire2Q8K1S6 718 aa20.99■□□□□ 0.95
Trim47-202ENSMUST00000106441 Cnot6lQ8VEG6 555 aa20.99■□□□□ 0.95
Trim47-202ENSMUST00000106441 Map7d2A2AG50 781 aa20.98■□□□□ 0.95
Trim47-202ENSMUST00000106441 Cplx2P84086 134 aa20.98■□□□□ 0.95
Trim47-202ENSMUST00000106441 Spg7Q3ULF4 781 aa20.98■□□□□ 0.95
Trim47-202ENSMUST00000106441 Rnaseh2aQ9CWY8 301 aa20.98■□□□□ 0.95
Trim47-202ENSMUST00000106441 Ccdc47Q9D024 483 aaKnown RBP20.98■□□□□ 0.95
Trim47-202ENSMUST00000106441 Dctpp1Q9QY93 170 aa20.98■□□□□ 0.95
Trim47-202ENSMUST00000106441 CpdO89001 1377 aa20.98■□□□□ 0.95
Trim47-202ENSMUST00000106441 Nme8Q715T0 586 aa20.97■□□□□ 0.95
Trim47-202ENSMUST00000106441 Skor1Q8BX46 964 aa20.97■□□□□ 0.95
Trim47-202ENSMUST00000106441 Acot9Q9R0X4 439 aaKnown RBP20.97■□□□□ 0.95
Trim47-202ENSMUST00000106441 Mroh6V9GX81 722 aa20.97■□□□□ 0.95
Trim47-202ENSMUST00000106441 Sycp2lA0A0M3U1B0 842 aa20.97■□□□□ 0.95
Trim47-202ENSMUST00000106441 Myo1bP46735 1107 aa20.97■□□□□ 0.95
Trim47-202ENSMUST00000106441 Ppp1r21Q3TDD9 780 aa20.97■□□□□ 0.95
Trim47-202ENSMUST00000106441 Frmd3Q8BHD4 595 aa20.97■□□□□ 0.95
Trim47-202ENSMUST00000106441 Mast3Q3U214 1321 aa20.97■□□□□ 0.95
Trim47-202ENSMUST00000106441 Bin1O08539 588 aaKnown RBP20.96■□□□□ 0.95
Trim47-202ENSMUST00000106441 Mapkapk5O54992 473 aa20.96■□□□□ 0.95
Trim47-202ENSMUST00000106441 Cplx1P63040 134 aa20.96■□□□□ 0.95
Trim47-202ENSMUST00000106441 Rbm15bQ6PHZ5 887 aaKnown RBP20.96■□□□□ 0.95
Trim47-202ENSMUST00000106441 Fam53cQ8BXQ8 393 aa20.96■□□□□ 0.95
Trim47-202ENSMUST00000106441 Plekhg6Q8R0J1 787 aa20.96■□□□□ 0.95
Trim47-202ENSMUST00000106441 Gpr108Q91WD0 569 aa20.96■□□□□ 0.95
Trim47-202ENSMUST00000106441 Myh13B1AR69 1938 aa20.96■□□□□ 0.95
Retrieved 100 of 22,080 RNA–protein pairs in 14.8 ms