RNA–Protein interactions for RNA: ENSMUST00000068992.7

Pcdh9-201, Transcript of Protocadherin 9, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Pcdh9, Length 3,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9-201ENSMUST00000068992 Ppfibp1Q8C8U0 969 aaKnown RBP9.41□□□□□ -0.9
Pcdh9-201ENSMUST00000068992 Rhot2Q8JZN7 620 aa9.41□□□□□ -0.9
Pcdh9-201ENSMUST00000068992 Dnaaf4Q8R368 420 aa9.41□□□□□ -0.9
Pcdh9-201ENSMUST00000068992 Lrrc2Q8VDB8 371 aa9.41□□□□□ -0.9
Pcdh9-201ENSMUST00000068992 DccP70211 1447 aa9.41□□□□□ -0.9
Pcdh9-201ENSMUST00000068992 Gm4307E9PZY4 289 aa9.4□□□□□ -0.9
Pcdh9-201ENSMUST00000068992 Prl3d2F6R3P9 224 aa9.4□□□□□ -0.9
Pcdh9-201ENSMUST00000068992 Gm4312K9J7E2 289 aa9.4□□□□□ -0.9
Pcdh9-201ENSMUST00000068992 Tmem232Q5K6N0 675 aa9.4□□□□□ -0.9
Pcdh9-201ENSMUST00000068992 U2af1l4Q8BGJ9 220 aa9.4□□□□□ -0.9
Pcdh9-201ENSMUST00000068992 Enox1Q8BHR2 643 aaKnown RBP9.4□□□□□ -0.9
Pcdh9-201ENSMUST00000068992 MlphQ91V27 590 aa9.4□□□□□ -0.9
Pcdh9-201ENSMUST00000068992 Trap1Q9CQN1 706 aaKnown RBP9.4□□□□□ -0.9
Pcdh9-201ENSMUST00000068992 Smc1aQ9CU62 1233 aaKnown RBP9.4□□□□□ -0.9
Pcdh9-201ENSMUST00000068992 RarsQ9D0I9 660 aaKnown RBP9.4□□□□□ -0.9
Pcdh9-201ENSMUST00000068992 E9QMW4 1145 aa9.4□□□□□ -0.9
Pcdh9-201ENSMUST00000068992 Tpm1P58771 284 aa9.4□□□□□ -0.9
Pcdh9-201ENSMUST00000068992 Cyp4x1Q6A152 507 aa9.4□□□□□ -0.9
Pcdh9-201ENSMUST00000068992 TxlnaQ6PAM1 554 aaKnown RBP9.4□□□□□ -0.9
Pcdh9-201ENSMUST00000068992 Acot9Q9R0X4 439 aaKnown RBP9.4□□□□□ -0.9
Pcdh9-201ENSMUST00000068992 Myo1cQ9WTI7 1063 aa9.4□□□□□ -0.9
Pcdh9-201ENSMUST00000068992 Krt24A1L317 512 aa9.4□□□□□ -0.91
Pcdh9-201ENSMUST00000068992 Cspp1B2RX88 1205 aa9.4□□□□□ -0.91
Pcdh9-201ENSMUST00000068992 Pcdhb9E9Q5G2 828 aa9.4□□□□□ -0.91
Pcdh9-201ENSMUST00000068992 Gjb4Q02738 266 aa9.4□□□□□ -0.91
Pcdh9-201ENSMUST00000068992 Tnfaip8l3Q3TBL6 204 aa9.4□□□□□ -0.91
Pcdh9-201ENSMUST00000068992 Ttll12Q3UDE2 639 aa9.4□□□□□ -0.91
Pcdh9-201ENSMUST00000068992 Rhbdf1Q6PIX5 856 aa9.4□□□□□ -0.91
Pcdh9-201ENSMUST00000068992 Acnat2Q8BGG9 420 aa9.4□□□□□ -0.91
Pcdh9-201ENSMUST00000068992 March8Q9DBD2 286 aa9.4□□□□□ -0.91
Pcdh9-201ENSMUST00000068992 SktA2AQ25 1946 aaKnown RBP9.39□□□□□ -0.91
Pcdh9-201ENSMUST00000068992 TnksQ6PFX9 1320 aa9.39□□□□□ -0.91
Pcdh9-201ENSMUST00000068992 Prdm1Q60636 856 aa9.39□□□□□ -0.91
Pcdh9-201ENSMUST00000068992 CtcfQ61164 736 aaKnown RBP9.39□□□□□ -0.91
Pcdh9-201ENSMUST00000068992 BcrQ6PAJ1 1270 aa9.39□□□□□ -0.91
Pcdh9-201ENSMUST00000068992 Bola3Q8CEI1 110 aa9.39□□□□□ -0.91
Pcdh9-201ENSMUST00000068992 Gm5624F6ZZG8 207 aa9.39□□□□□ -0.91
Pcdh9-201ENSMUST00000068992 Spata5Q3UMC0 893 aaKnown RBP9.39□□□□□ -0.91
Pcdh9-201ENSMUST00000068992 Cep85Q8BMK0 761 aa9.39□□□□□ -0.91
Pcdh9-201ENSMUST00000068992 Usp27Q8CEG8 438 aa9.39□□□□□ -0.91
Pcdh9-201ENSMUST00000068992 Mrps25Q9D125 171 aaKnown RBP9.39□□□□□ -0.91
Pcdh9-201ENSMUST00000068992 Fam173bQ9D1Z3 247 aa9.39□□□□□ -0.91
Pcdh9-201ENSMUST00000068992 Rcan1Q9JHG6 198 aa9.39□□□□□ -0.91
Pcdh9-201ENSMUST00000068992 Ercc4Q9QZD4 917 aa9.39□□□□□ -0.91
Pcdh9-201ENSMUST00000068992 Atp12aQ9Z1W8 1035 aa9.39□□□□□ -0.91
Pcdh9-201ENSMUST00000068992 Mtcl1Q3UHU5 1945 aa9.39□□□□□ -0.91
Pcdh9-201ENSMUST00000068992 Eya2O08575 532 aa9.39□□□□□ -0.91
Pcdh9-201ENSMUST00000068992 Ptpn12P35831 775 aa9.39□□□□□ -0.91
Pcdh9-201ENSMUST00000068992 Gpr182P43142 395 aa9.39□□□□□ -0.91
Pcdh9-201ENSMUST00000068992 Cep63Q3UPP8 700 aa9.39□□□□□ -0.91
Pcdh9-201ENSMUST00000068992 Gja3Q64448 417 aa9.39□□□□□ -0.91
Pcdh9-201ENSMUST00000068992 Lrrn2Q6PHP6 730 aa9.39□□□□□ -0.91
Pcdh9-201ENSMUST00000068992 Bicdl2Q8CHW5 507 aa9.39□□□□□ -0.91
Pcdh9-201ENSMUST00000068992 Tcp11l2Q8K1H7 517 aa9.39□□□□□ -0.91
Pcdh9-201ENSMUST00000068992 Med23Q80YQ2 1367 aa9.39□□□□□ -0.91
Pcdh9-201ENSMUST00000068992 Sox5P35710 763 aa9.38□□□□□ -0.91
Pcdh9-201ENSMUST00000068992 Meis3P97368 378 aa9.38□□□□□ -0.91
Pcdh9-201ENSMUST00000068992 Fam76aQ922G2 307 aa9.38□□□□□ -0.91
Pcdh9-201ENSMUST00000068992 Scrn1Q9CZC8 414 aa9.38□□□□□ -0.91
Pcdh9-201ENSMUST00000068992 Mfap3lQ9D3X9 409 aa9.38□□□□□ -0.91
Pcdh9-201ENSMUST00000068992 Tspoap1Q7TNF8 1846 aa9.38□□□□□ -0.91
Pcdh9-201ENSMUST00000068992 Akap2O54931 893 aa9.38□□□□□ -0.91
Pcdh9-201ENSMUST00000068992 GpiP06745 558 aaKnown RBP9.38□□□□□ -0.91
Pcdh9-201ENSMUST00000068992 Msh3P13705 1091 aa9.38□□□□□ -0.91
Pcdh9-201ENSMUST00000068992 Mcm6P97311 821 aa9.38□□□□□ -0.91
Pcdh9-201ENSMUST00000068992 Kiaa0754Q69ZZ9 979 aa9.38□□□□□ -0.91
Pcdh9-201ENSMUST00000068992 Baiap3Q80TT2 1134 aa9.38□□□□□ -0.91
Pcdh9-201ENSMUST00000068992 Gm36210A0A1B0GS00 229 aa9.38□□□□□ -0.91
Pcdh9-201ENSMUST00000068992 A0A1W2P6Q8 802 aa9.38□□□□□ -0.91
Pcdh9-201ENSMUST00000068992 Gm9048A0A1W2P7H4 802 aa9.38□□□□□ -0.91
Pcdh9-201ENSMUST00000068992 A0A1W2P7S8 802 aa9.38□□□□□ -0.91
Pcdh9-201ENSMUST00000068992 A0A1W2P7Z8 802 aa9.38□□□□□ -0.91
Pcdh9-201ENSMUST00000068992 Gm9046A0A1W2P855 802 aa9.38□□□□□ -0.91
Pcdh9-201ENSMUST00000068992 Il27raO70394 623 aa9.38□□□□□ -0.91
Pcdh9-201ENSMUST00000068992 Chp1P61022 195 aa9.38□□□□□ -0.91
Pcdh9-201ENSMUST00000068992 Gucy2cQ3UWA6 1072 aa9.38□□□□□ -0.91
Pcdh9-201ENSMUST00000068992 PnocQ64387 187 aa9.38□□□□□ -0.91
Pcdh9-201ENSMUST00000068992 Cdc5lQ6A068 802 aaKnown RBP9.38□□□□□ -0.91
Pcdh9-201ENSMUST00000068992 Dnajc7Q9QYI3 494 aa9.38□□□□□ -0.91
Pcdh9-201ENSMUST00000068992 Suclg2Q9Z2I8 433 aa9.38□□□□□ -0.91
Pcdh9-201ENSMUST00000068992 Phldb3E9QAF4 648 aa9.37□□□□□ -0.91
Pcdh9-201ENSMUST00000068992 Pde11aP0C1Q2 933 aa9.37□□□□□ -0.91
Pcdh9-201ENSMUST00000068992 Q3TYL0 343 aa9.37□□□□□ -0.91
Pcdh9-201ENSMUST00000068992 Hand2Q61039 217 aa9.37□□□□□ -0.91
Pcdh9-201ENSMUST00000068992 Evc2Q8K1G2 1220 aa9.37□□□□□ -0.91
Pcdh9-201ENSMUST00000068992 Tubb6Q922F4 447 aa9.37□□□□□ -0.91
Pcdh9-201ENSMUST00000068992 EvplQ9D952 2035 aa9.37□□□□□ -0.91
Pcdh9-201ENSMUST00000068992 Zfp853A0A1D5RM95 733 aa9.37□□□□□ -0.91
Pcdh9-201ENSMUST00000068992 ErmnQ5EBJ4 281 aa9.37□□□□□ -0.91
Pcdh9-201ENSMUST00000068992 Mctp2Q5RJH2 878 aa9.37□□□□□ -0.91
Pcdh9-201ENSMUST00000068992 Sik1Q60670 779 aa9.37□□□□□ -0.91
Pcdh9-201ENSMUST00000068992 Papd7Q6PB75 542 aa9.37□□□□□ -0.91
Pcdh9-201ENSMUST00000068992 Anks1bQ8BIZ1 1259 aa9.37□□□□□ -0.91
Pcdh9-201ENSMUST00000068992 Ndufb9Q9CQJ8 179 aa9.37□□□□□ -0.91
Pcdh9-201ENSMUST00000068992 Mis18aQ9CZJ6 204 aa9.37□□□□□ -0.91
Pcdh9-201ENSMUST00000068992 Mss51Q9D5Z5 446 aa9.37□□□□□ -0.91
Pcdh9-201ENSMUST00000068992 PdclQ9DBX2 301 aa9.37□□□□□ -0.91
Pcdh9-201ENSMUST00000068992 Gm973E9Q295 1059 aa9.36□□□□□ -0.91
Pcdh9-201ENSMUST00000068992 Sept1P42209 366 aa9.36□□□□□ -0.91
Pcdh9-201ENSMUST00000068992 LyarQ08288 388 aaKnown RBP9.36□□□□□ -0.91
Retrieved 100 of 22,080 RNA–protein pairs in 28.8 ms