RNA–Protein interactions for RNA: ENSMUST00000055758.15

Ubr3-201, Transcript of E3 ubiquitin-protein ligase UBR3, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ubr3, Length 8,072 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3-201ENSMUST00000055758 FanccP50652 591 aa17.36■□□□□ 0.37
Ubr3-201ENSMUST00000055758 Nlrp4cQ3TKR3 982 aa17.36■□□□□ 0.37
Ubr3-201ENSMUST00000055758 Lmbrd2Q8C561 694 aa17.36■□□□□ 0.37
Ubr3-201ENSMUST00000055758 Tmem143Q8VD26 458 aa17.36■□□□□ 0.37
Ubr3-201ENSMUST00000055758 Sar1bQ9CQC9 198 aa17.36■□□□□ 0.37
Ubr3-201ENSMUST00000055758 TrdnE9Q9K5 693 aa17.35■□□□□ 0.37
Ubr3-201ENSMUST00000055758 Enc1O35709 589 aa17.35■□□□□ 0.37
Ubr3-201ENSMUST00000055758 Rps6ka1P18653 724 aa17.35■□□□□ 0.37
Ubr3-201ENSMUST00000055758 Syf2Q9D198 242 aaKnown RBP17.35■□□□□ 0.37
Ubr3-201ENSMUST00000055758 Tdo2P48776 406 aa17.35■□□□□ 0.37
Ubr3-201ENSMUST00000055758 Tmtc4Q8BG19 741 aa17.35■□□□□ 0.37
Ubr3-201ENSMUST00000055758 Golga4Q91VW5 2238 aa17.35■□□□□ 0.37
Ubr3-201ENSMUST00000055758 S100a5P63084 93 aa17.35■□□□□ 0.37
Ubr3-201ENSMUST00000055758 Slc10a4Q3UEZ8 437 aa17.35■□□□□ 0.37
Ubr3-201ENSMUST00000055758 Tmod2Q9JKK7 351 aa17.35■□□□□ 0.37
Ubr3-201ENSMUST00000055758 PaskQ8CEE6 1383 aa17.35■□□□□ 0.37
Ubr3-201ENSMUST00000055758 Mroh9G5E8L9 891 aa17.35■□□□□ 0.37
Ubr3-201ENSMUST00000055758 Gm28047Q3US59 414 aa17.35■□□□□ 0.37
Ubr3-201ENSMUST00000055758 Kif11Q6P9P6 1052 aa17.35■□□□□ 0.37
Ubr3-201ENSMUST00000055758 Wbp11Q923D5 641 aaKnown RBP17.35■□□□□ 0.37
Ubr3-201ENSMUST00000055758 Gm7298A0A0N4SVU1 1476 aa17.35■□□□□ 0.37
Ubr3-201ENSMUST00000055758 Clec11aO88200 328 aa17.35■□□□□ 0.37
Ubr3-201ENSMUST00000055758 NxnP97346 435 aa17.35■□□□□ 0.37
Ubr3-201ENSMUST00000055758 Dab2P98078 766 aa17.35■□□□□ 0.37
Ubr3-201ENSMUST00000055758 Pde4dQ01063 747 aa17.35■□□□□ 0.37
Ubr3-201ENSMUST00000055758 Pla2g4fQ50L41 855 aa17.35■□□□□ 0.37
Ubr3-201ENSMUST00000055758 Atp2a3Q64518 1038 aa17.35■□□□□ 0.37
Ubr3-201ENSMUST00000055758 Znf428Q8C1M2 176 aa17.35■□□□□ 0.37
Ubr3-201ENSMUST00000055758 AdpgkQ8VDL4 496 aa17.35■□□□□ 0.37
Ubr3-201ENSMUST00000055758 Mlh1Q9JK91 760 aa17.35■□□□□ 0.37
Ubr3-201ENSMUST00000055758 Ms4a1P19437 291 aa17.34■□□□□ 0.37
Ubr3-201ENSMUST00000055758 Pde5aQ8CG03 865 aa17.34■□□□□ 0.37
Ubr3-201ENSMUST00000055758 Cct6aP80317 531 aaKnown RBP17.34■□□□□ 0.37
Ubr3-201ENSMUST00000055758 Nop2Q922K7 793 aaKnown RBP17.34■□□□□ 0.37
Ubr3-201ENSMUST00000055758 Art2bO35975 289 aa17.34■□□□□ 0.37
Ubr3-201ENSMUST00000055758 Prim1P20664 417 aa17.34■□□□□ 0.37
Ubr3-201ENSMUST00000055758 Trim80Q3V061 624 aa17.34■□□□□ 0.37
Ubr3-201ENSMUST00000055758 Luc7l3Q5SUF2 432 aaKnown RBP17.34■□□□□ 0.37
Ubr3-201ENSMUST00000055758 Tor4aQ8BH02 426 aa17.34■□□□□ 0.37
Ubr3-201ENSMUST00000055758 Q8BZJ8 459 aa17.34■□□□□ 0.37
Ubr3-201ENSMUST00000055758 Desi2Q9D291 194 aa17.34■□□□□ 0.37
Ubr3-201ENSMUST00000055758 Nfil3O08750 462 aa17.34■□□□□ 0.37
Ubr3-201ENSMUST00000055758 Spc25Q3UA16 226 aa17.34■□□□□ 0.37
Ubr3-201ENSMUST00000055758 Rexo1Q7TT28 1213 aa17.34■□□□□ 0.37
Ubr3-201ENSMUST00000055758 Rps6kb1Q8BSK8 525 aa17.34■□□□□ 0.37
Ubr3-201ENSMUST00000055758 Fam207aP58468 219 aaKnown RBP17.34■□□□□ 0.37
Ubr3-201ENSMUST00000055758 Bbs5Q9CZQ9 341 aa17.34■□□□□ 0.37
Ubr3-201ENSMUST00000055758 Sycp2Q9CUU3 1500 aa17.34■□□□□ 0.37
Ubr3-201ENSMUST00000055758 Gucy2fQ5SDA5 1108 aa17.34■□□□□ 0.37
Ubr3-201ENSMUST00000055758 Fmnl1Q9JL26 1094 aa17.34■□□□□ 0.37
Ubr3-201ENSMUST00000055758 Osbpl5Q9ER64 874 aa17.33■□□□□ 0.37
Ubr3-201ENSMUST00000055758 Wdr93Q402B2 695 aa17.33■□□□□ 0.37
Ubr3-201ENSMUST00000055758 Fgd5Q80UZ0 1219 aa17.33■□□□□ 0.37
Ubr3-201ENSMUST00000055758 Hexim1Q8R409 356 aaKnown RBP17.33■□□□□ 0.37
Ubr3-201ENSMUST00000055758 Trim16Q99PP9 556 aa17.33■□□□□ 0.37
Ubr3-201ENSMUST00000055758 GnpatP98192 678 aa17.33■□□□□ 0.36
Ubr3-201ENSMUST00000055758 Pram1Q6BCL1 675 aa17.33■□□□□ 0.36
Ubr3-201ENSMUST00000055758 Gm30191A0A0U1RNT7 187 aa17.33■□□□□ 0.36
Ubr3-201ENSMUST00000055758 Pde11aP0C1Q2 933 aa17.33■□□□□ 0.36
Ubr3-201ENSMUST00000055758 MaeaQ4VC33 396 aa17.33■□□□□ 0.36
Ubr3-201ENSMUST00000055758 Nucks1Q80XU3 234 aaKnown RBP17.33■□□□□ 0.36
Ubr3-201ENSMUST00000055758 Rrp1P56183 494 aaKnown RBP17.33■□□□□ 0.36
Ubr3-201ENSMUST00000055758 Zc3h12cQ5DTV4 884 aa17.33■□□□□ 0.36
Ubr3-201ENSMUST00000055758 Ppme1Q8BVQ5 386 aa17.33■□□□□ 0.36
Ubr3-201ENSMUST00000055758 Vps37bQ8R0J7 285 aa17.33■□□□□ 0.36
Ubr3-201ENSMUST00000055758 Yipf3Q3UDR8 347 aa17.33■□□□□ 0.36
Ubr3-201ENSMUST00000055758 Kif6E9PX57 802 aa17.32■□□□□ 0.36
Ubr3-201ENSMUST00000055758 Mx1P09922 631 aa17.32■□□□□ 0.36
Ubr3-201ENSMUST00000055758 Nek11Q8C0Q4 628 aa17.32■□□□□ 0.36
Ubr3-201ENSMUST00000055758 Bach2P97303 839 aa17.32■□□□□ 0.36
Ubr3-201ENSMUST00000055758 Rassf6Q80UQ2 353 aa17.32■□□□□ 0.36
Ubr3-201ENSMUST00000055758 Kif2cQ922S8 721 aa17.32■□□□□ 0.36
Ubr3-201ENSMUST00000055758 Dph5Q9CWQ0 281 aa17.32■□□□□ 0.36
Ubr3-201ENSMUST00000055758 4930449I24RikQ9D5E3 319 aa17.32■□□□□ 0.36
Ubr3-201ENSMUST00000055758 Il16O54824 1322 aa17.32■□□□□ 0.36
Ubr3-201ENSMUST00000055758 Gdap1O88741 358 aa17.32■□□□□ 0.36
Ubr3-201ENSMUST00000055758 Uspl1Q3ULM6 1089 aa17.32■□□□□ 0.36
Ubr3-201ENSMUST00000055758 Ppp4r3aQ6P2K6 820 aa17.32■□□□□ 0.36
Ubr3-201ENSMUST00000055758 Trim35Q8C006 501 aa17.32■□□□□ 0.36
Ubr3-201ENSMUST00000055758 Gja8P28236 440 aa17.32■□□□□ 0.36
Ubr3-201ENSMUST00000055758 Prdm1Q60636 856 aa17.32■□□□□ 0.36
Ubr3-201ENSMUST00000055758 Rdm1Q9CQK3 281 aa17.32■□□□□ 0.36
Ubr3-201ENSMUST00000055758 Egfem1Q8C088 590 aa17.32■□□□□ 0.36
Ubr3-201ENSMUST00000055758 NelfbQ8C4Y3 580 aa17.32■□□□□ 0.36
Ubr3-201ENSMUST00000055758 Ankrd2Q9WV06 328 aa17.32■□□□□ 0.36
Ubr3-201ENSMUST00000055758 Ror2Q9Z138 944 aa17.32■□□□□ 0.36
Ubr3-201ENSMUST00000055758 Casp1P29452 402 aa17.32■□□□□ 0.36
Ubr3-201ENSMUST00000055758 Trim21Q62191 470 aa17.32■□□□□ 0.36
Ubr3-201ENSMUST00000055758 Hgh1Q8C3I8 393 aa17.31■□□□□ 0.36
Ubr3-201ENSMUST00000055758 Col4a3bpQ9EQG9 624 aa17.31■□□□□ 0.36
Ubr3-201ENSMUST00000055758 Ighmbp2P40694 993 aa17.31■□□□□ 0.36
Ubr3-201ENSMUST00000055758 Gm10110D3Z5M2 615 aa17.31■□□□□ 0.36
Ubr3-201ENSMUST00000055758 Calml3Q9D6P8 149 aa17.31■□□□□ 0.36
Ubr3-201ENSMUST00000055758 Mdh1bQ5F204 500 aa17.31■□□□□ 0.36
Ubr3-201ENSMUST00000055758 Myl10Q62082 202 aa17.31■□□□□ 0.36
Ubr3-201ENSMUST00000055758 NostrinQ6WKZ7 506 aa17.31■□□□□ 0.36
Ubr3-201ENSMUST00000055758 Gm10563F6WIE4 79 aa17.31■□□□□ 0.36
Ubr3-201ENSMUST00000055758 Lrrc36Q3V0M2 755 aa17.31■□□□□ 0.36
Ubr3-201ENSMUST00000055758 Utp18Q5SSI6 552 aaKnown RBP17.31■□□□□ 0.36
Ubr3-201ENSMUST00000055758 Wdr44Q6NVE8 915 aa17.31■□□□□ 0.36
Retrieved 100 of 22,080 RNA–protein pairs in 14.5 ms