RNA–Protein interactions for RNA: ENSMUST00000050078.12

Sdf4-201, Transcript of 45 kDa calcium-binding protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sdf4, Length 5,177 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sdf4-201ENSMUST00000050078 Trim56Q80VI1 734 aaKnown RBP13.96□□□□□ -0.17
Sdf4-201ENSMUST00000050078 Ndufab1Q9CR21 156 aa13.96□□□□□ -0.17
Sdf4-201ENSMUST00000050078 Abcb6Q9DC29 842 aa13.96□□□□□ -0.17
Sdf4-201ENSMUST00000050078 Apol10aQ8CCA5 318 aa13.96□□□□□ -0.17
Sdf4-201ENSMUST00000050078 Gimap7Q8R379 293 aa13.96□□□□□ -0.17
Sdf4-201ENSMUST00000050078 Cyp2ab1S4R196 498 aa13.96□□□□□ -0.17
Sdf4-201ENSMUST00000050078 Sh3tc1G3X9F6 1346 aa13.96□□□□□ -0.17
Sdf4-201ENSMUST00000050078 Aox2Q5SGK3 1345 aa13.96□□□□□ -0.17
Sdf4-201ENSMUST00000050078 Gm43638A0A0J9YU36 694 aa13.96□□□□□ -0.18
Sdf4-201ENSMUST00000050078 Skor2A7M7C7 1008 aa13.96□□□□□ -0.18
Sdf4-201ENSMUST00000050078 Ms4a1P19437 291 aa13.96□□□□□ -0.18
Sdf4-201ENSMUST00000050078 Fbln2P37889 1221 aa13.96□□□□□ -0.18
Sdf4-201ENSMUST00000050078 Ccdc157Q5SPX1 718 aa13.96□□□□□ -0.18
Sdf4-201ENSMUST00000050078 MmeQ61391 750 aa13.96□□□□□ -0.18
Sdf4-201ENSMUST00000050078 StrbpQ91WM1 672 aaKnown RBP13.96□□□□□ -0.18
Sdf4-201ENSMUST00000050078 Rsph10bE9PYQ0 876 aa13.95□□□□□ -0.18
Sdf4-201ENSMUST00000050078 Cep63Q3UPP8 700 aa13.95□□□□□ -0.18
Sdf4-201ENSMUST00000050078 Slc27a1Q60714 646 aa13.95□□□□□ -0.18
Sdf4-201ENSMUST00000050078 Krt39Q6IFX4 482 aa13.95□□□□□ -0.18
Sdf4-201ENSMUST00000050078 Usp37Q8C0R0 979 aa13.95□□□□□ -0.18
Sdf4-201ENSMUST00000050078 Npc1l1Q6T3U4 1333 aa13.95□□□□□ -0.18
Sdf4-201ENSMUST00000050078 Eftud2O08810 971 aaKnown RBP13.95□□□□□ -0.18
Sdf4-201ENSMUST00000050078 Neurog2P70447 263 aa13.95□□□□□ -0.18
Sdf4-201ENSMUST00000050078 Tmtc2Q56A06 836 aa13.95□□□□□ -0.18
Sdf4-201ENSMUST00000050078 Kcna6Q61923 529 aa13.95□□□□□ -0.18
Sdf4-201ENSMUST00000050078 Mtss1lQ6P9S0 715 aa13.95□□□□□ -0.18
Sdf4-201ENSMUST00000050078 PdclQ9DBX2 301 aa13.95□□□□□ -0.18
Sdf4-201ENSMUST00000050078 Rpl13P47963 211 aaKnown RBP13.95□□□□□ -0.18
Sdf4-201ENSMUST00000050078 NpeppsQ11011 920 aa13.95□□□□□ -0.18
Sdf4-201ENSMUST00000050078 Kiaa1328Q6NZK5 612 aa13.95□□□□□ -0.18
Sdf4-201ENSMUST00000050078 Ppp2r5bQ6PD28 497 aa13.95□□□□□ -0.18
Sdf4-201ENSMUST00000050078 Rexo1Q7TT28 1213 aa13.95□□□□□ -0.18
Sdf4-201ENSMUST00000050078 Arhgef6Q8K4I3 771 aa13.95□□□□□ -0.18
Sdf4-201ENSMUST00000050078 Enox2Q8R0Z2 598 aa13.95□□□□□ -0.18
Sdf4-201ENSMUST00000050078 Acsl3Q9CZW4 720 aaKnown RBP13.95□□□□□ -0.18
Sdf4-201ENSMUST00000050078 Sf3a3Q9D554 501 aaKnown RBP13.95□□□□□ -0.18
Sdf4-201ENSMUST00000050078 Hs6st3Q9QYK4 470 aa13.95□□□□□ -0.18
Sdf4-201ENSMUST00000050078 Cetn3O35648 167 aa13.95□□□□□ -0.18
Sdf4-201ENSMUST00000050078 Ncoa4Q5U4H9 625 aa13.95□□□□□ -0.18
Sdf4-201ENSMUST00000050078 Asap2Q7SIG6 958 aa13.95□□□□□ -0.18
Sdf4-201ENSMUST00000050078 Sestd1Q80UK0 696 aa13.95□□□□□ -0.18
Sdf4-201ENSMUST00000050078 Klhl7Q8BUL5 586 aa13.95□□□□□ -0.18
Sdf4-201ENSMUST00000050078 Hps4Q99KG7 671 aa13.95□□□□□ -0.18
Sdf4-201ENSMUST00000050078 Mx2Q9WVP9 655 aa13.95□□□□□ -0.18
Sdf4-201ENSMUST00000050078 Madcam1Q61826 405 aa13.94□□□□□ -0.18
Sdf4-201ENSMUST00000050078 Ehbp1Q69ZW3 1231 aa13.94□□□□□ -0.18
Sdf4-201ENSMUST00000050078 Traf3ip3Q8C0G2 513 aa13.94□□□□□ -0.18
Sdf4-201ENSMUST00000050078 Vps36Q91XD6 386 aa13.94□□□□□ -0.18
Sdf4-201ENSMUST00000050078 Cabp7Q91ZM8 215 aa13.94□□□□□ -0.18
Sdf4-201ENSMUST00000050078 Col1a2Q01149 1372 aa13.94□□□□□ -0.18
Sdf4-201ENSMUST00000050078 LdhaP06151 332 aaKnown RBP13.94□□□□□ -0.18
Sdf4-201ENSMUST00000050078 Pde11aP0C1Q2 933 aa13.94□□□□□ -0.18
Sdf4-201ENSMUST00000050078 Gpr182P43142 395 aa13.94□□□□□ -0.18
Sdf4-201ENSMUST00000050078 Ccdc174Q3U155 467 aa13.94□□□□□ -0.18
Sdf4-201ENSMUST00000050078 PsdQ5DTT2 1024 aa13.94□□□□□ -0.18
Sdf4-201ENSMUST00000050078 RragaQ80X95 313 aa13.94□□□□□ -0.18
Sdf4-201ENSMUST00000050078 Dnaaf2Q8BPI1 814 aa13.94□□□□□ -0.18
Sdf4-201ENSMUST00000050078 EngaseQ8BX80 734 aa13.94□□□□□ -0.18
Sdf4-201ENSMUST00000050078 Ebag9Q9D0V7 213 aa13.94□□□□□ -0.18
Sdf4-201ENSMUST00000050078 Tldc2A2ACG1 198 aa13.94□□□□□ -0.18
Sdf4-201ENSMUST00000050078 Foxp1P58462 705 aa13.94□□□□□ -0.18
Sdf4-201ENSMUST00000050078 Zdhhc9P59268 364 aa13.94□□□□□ -0.18
Sdf4-201ENSMUST00000050078 Kif22Q3V300 660 aa13.94□□□□□ -0.18
Sdf4-201ENSMUST00000050078 Map3k12Q60700 888 aa13.94□□□□□ -0.18
Sdf4-201ENSMUST00000050078 Klhl20Q8VCK5 604 aa13.94□□□□□ -0.18
Sdf4-201ENSMUST00000050078 Usp42B2RQC2 1324 aaKnown RBP13.94□□□□□ -0.18
Sdf4-201ENSMUST00000050078 AceP09470 1312 aa13.94□□□□□ -0.18
Sdf4-201ENSMUST00000050078 Bpifb4A2BGH0 617 aa13.94□□□□□ -0.18
Sdf4-201ENSMUST00000050078 Apol10bG3X9K7 334 aa13.94□□□□□ -0.18
Sdf4-201ENSMUST00000050078 C87499Q3UX49 493 aa13.94□□□□□ -0.18
Sdf4-201ENSMUST00000050078 Sp4Q62445 782 aa13.94□□□□□ -0.18
Sdf4-201ENSMUST00000050078 Shtn1Q8K2Q9 631 aa13.94□□□□□ -0.18
Sdf4-201ENSMUST00000050078 Pcdha12Q91Y18 950 aa13.94□□□□□ -0.18
Sdf4-201ENSMUST00000050078 Pcdhb9E9Q5G2 828 aa13.94□□□□□ -0.18
Sdf4-201ENSMUST00000050078 Eef2kO08796 724 aa13.94□□□□□ -0.18
Sdf4-201ENSMUST00000050078 Arid5bQ8BM75 1188 aaKnown RBP13.94□□□□□ -0.18
Sdf4-201ENSMUST00000050078 Zfp317Q8C0Q5 607 aa13.94□□□□□ -0.18
Sdf4-201ENSMUST00000050078 Pcdha7Q91Y13 937 aa13.94□□□□□ -0.18
Sdf4-201ENSMUST00000050078 Golga5Q9QYE6 729 aa13.94□□□□□ -0.18
Sdf4-201ENSMUST00000050078 Epb41l3Q9WV92 929 aa13.94□□□□□ -0.18
Sdf4-201ENSMUST00000050078 Uggt2E9Q4X2 1504 aa13.93□□□□□ -0.18
Sdf4-201ENSMUST00000050078 Cct5P80316 541 aaKnown RBP13.93□□□□□ -0.18
Sdf4-201ENSMUST00000050078 1700013D24RikQ0P521 120 aa13.93□□□□□ -0.18
Sdf4-201ENSMUST00000050078 Tubb2aQ7TMM9 445 aa13.93□□□□□ -0.18
Sdf4-201ENSMUST00000050078 Dcaf5Q80T85 946 aa13.93□□□□□ -0.18
Sdf4-201ENSMUST00000050078 Hgh1Q8C3I8 393 aa13.93□□□□□ -0.18
Sdf4-201ENSMUST00000050078 Hps3Q91VB4 1002 aa13.93□□□□□ -0.18
Sdf4-201ENSMUST00000050078 PpanQ91YU8 470 aaKnown RBP13.93□□□□□ -0.18
Sdf4-201ENSMUST00000050078 Tubb2bQ9CWF2 445 aa13.93□□□□□ -0.18
Sdf4-201ENSMUST00000050078 Cdr2P97817 455 aa13.93□□□□□ -0.18
Sdf4-201ENSMUST00000050078 Ccdc129Q14B48 1034 aa13.93□□□□□ -0.18
Sdf4-201ENSMUST00000050078 Zfp91Q62511 572 aa13.93□□□□□ -0.18
Sdf4-201ENSMUST00000050078 Stn1Q8K2X3 378 aa13.93□□□□□ -0.18
Sdf4-201ENSMUST00000050078 Sar1bQ9CQC9 198 aa13.93□□□□□ -0.18
Sdf4-201ENSMUST00000050078 Suclg2Q9Z2I8 433 aa13.93□□□□□ -0.18
Sdf4-201ENSMUST00000050078 Large2Q5XPT3 690 aa13.93□□□□□ -0.18
Sdf4-201ENSMUST00000050078 Ano8Q6PB70 1060 aa13.93□□□□□ -0.18
Sdf4-201ENSMUST00000050078 Add3Q9QYB5 706 aaKnown RBP13.93□□□□□ -0.18
Sdf4-201ENSMUST00000050078 Tuft1O08970 390 aa13.93□□□□□ -0.18
Sdf4-201ENSMUST00000050078 MaeaQ4VC33 396 aa13.93□□□□□ -0.18
Retrieved 100 of 22,080 RNA–protein pairs in 22.6 ms