RNA–Protein interactions for RNA: ENSMUST00000033378.12

Ebf3-201, Transcript of Transcription factor COE3, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Ebf3, Length 4,838 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3-201ENSMUST00000033378 Abcc1O35379 1528 aa20.62■□□□□ 0.89
Ebf3-201ENSMUST00000033378 Rsph10bE9PYQ0 876 aa20.62■□□□□ 0.89
Ebf3-201ENSMUST00000033378 Rpl13P47963 211 aaKnown RBP20.62■□□□□ 0.89
Ebf3-201ENSMUST00000033378 Ppp2r5bQ6PD28 497 aa20.62■□□□□ 0.89
Ebf3-201ENSMUST00000033378 NapaQ9DB05 295 aa20.62■□□□□ 0.89
Ebf3-201ENSMUST00000033378 Apol10bG3X9K7 334 aa20.62■□□□□ 0.89
Ebf3-201ENSMUST00000033378 Cdc23Q8BGZ4 597 aa20.62■□□□□ 0.89
Ebf3-201ENSMUST00000033378 Kif2cQ922S8 721 aa20.62■□□□□ 0.89
Ebf3-201ENSMUST00000033378 Cyp24a1Q64441 514 aa20.61■□□□□ 0.89
Ebf3-201ENSMUST00000033378 Efcab8Q8C9R9 203 aa20.61■□□□□ 0.89
Ebf3-201ENSMUST00000033378 Ccdc38Q8CDN8 563 aa20.61■□□□□ 0.89
Ebf3-201ENSMUST00000033378 Dydc2Q9D3X8 139 aa20.61■□□□□ 0.89
Ebf3-201ENSMUST00000033378 Sf3a3Q9D554 501 aaKnown RBP20.61■□□□□ 0.89
Ebf3-201ENSMUST00000033378 Paip2Q9D6V8 124 aa20.61■□□□□ 0.89
Ebf3-201ENSMUST00000033378 Ftl2P49945 183 aa20.61■□□□□ 0.89
Ebf3-201ENSMUST00000033378 Sox13Q04891 613 aa20.61■□□□□ 0.89
Ebf3-201ENSMUST00000033378 Mei4Q8BRM6 389 aa20.61■□□□□ 0.89
Ebf3-201ENSMUST00000033378 IqcdQ9D3V1 458 aa20.61■□□□□ 0.89
Ebf3-201ENSMUST00000033378 SphkapQ6NSW3 1687 aa20.61■□□□□ 0.89
Ebf3-201ENSMUST00000033378 Sos2Q02384 1333 aa20.61■□□□□ 0.89
Ebf3-201ENSMUST00000033378 Tmco5aQ9D9D5 303 aa20.61■□□□□ 0.89
Ebf3-201ENSMUST00000033378 Morc2aQ69ZX6 1030 aa20.61■□□□□ 0.89
Ebf3-201ENSMUST00000033378 Ncoa7Q6DFV7 943 aa20.61■□□□□ 0.89
Ebf3-201ENSMUST00000033378 Hook2Q7TMK6 716 aa20.61■□□□□ 0.89
Ebf3-201ENSMUST00000033378 RragaQ80X95 313 aa20.61■□□□□ 0.89
Ebf3-201ENSMUST00000033378 Ctdspl2Q8BG15 465 aa20.61■□□□□ 0.89
Ebf3-201ENSMUST00000033378 Rbm43Q99J64 343 aa20.61■□□□□ 0.89
Ebf3-201ENSMUST00000033378 Syde2E9PUP1 1314 aa20.6■□□□□ 0.89
Ebf3-201ENSMUST00000033378 Bpifb4A2BGH0 617 aa20.6■□□□□ 0.89
Ebf3-201ENSMUST00000033378 Cdcp1Q5U462 833 aa20.6■□□□□ 0.89
Ebf3-201ENSMUST00000033378 NfkbibQ60778 359 aa20.6■□□□□ 0.89
Ebf3-201ENSMUST00000033378 Atp6v0a4Q920R6 833 aa20.6■□□□□ 0.89
Ebf3-201ENSMUST00000033378 Dennd4bQ3U1Y4 1499 aa20.6■□□□□ 0.89
Ebf3-201ENSMUST00000033378 Eef2kO08796 724 aa20.6■□□□□ 0.89
Ebf3-201ENSMUST00000033378 Hfm1D3Z4R1 1434 aa20.6■□□□□ 0.89
Ebf3-201ENSMUST00000033378 Adam1aQ60813 791 aa20.6■□□□□ 0.89
Ebf3-201ENSMUST00000033378 Taok3Q8BYC6 898 aa20.6■□□□□ 0.89
Ebf3-201ENSMUST00000033378 Usp37Q8C0R0 979 aa20.6■□□□□ 0.89
Ebf3-201ENSMUST00000033378 Ppp2r3dQ9Z176 491 aa20.6■□□□□ 0.89
Ebf3-201ENSMUST00000033378 Arhgef1Q61210 920 aaKnown RBP20.6■□□□□ 0.89
Ebf3-201ENSMUST00000033378 Kif5bQ61768 963 aa20.6■□□□□ 0.89
Ebf3-201ENSMUST00000033378 Rbm12b2Q66JV4 834 aaKnown RBP20.6■□□□□ 0.89
Ebf3-201ENSMUST00000033378 Znf532Q6NXK2 1036 aa20.6■□□□□ 0.89
Ebf3-201ENSMUST00000033378 Mettl5Q8K1A0 209 aa20.6■□□□□ 0.89
Ebf3-201ENSMUST00000033378 Mrpl12Q9DB15 201 aaKnown RBP20.6■□□□□ 0.89
Ebf3-201ENSMUST00000033378 Lnx1O70263 728 aa20.59■□□□□ 0.89
Ebf3-201ENSMUST00000033378 Gm12185Q5NCB2 835 aa20.59■□□□□ 0.89
Ebf3-201ENSMUST00000033378 Traf3ip3Q8C0G2 513 aa20.59■□□□□ 0.89
Ebf3-201ENSMUST00000033378 Asic2Q925H0 512 aa20.59■□□□□ 0.89
Ebf3-201ENSMUST00000033378 A0A1W2P7S8 802 aa20.59■□□□□ 0.89
Ebf3-201ENSMUST00000033378 Cetn3O35648 167 aa20.59■□□□□ 0.89
Ebf3-201ENSMUST00000033378 Tmtc2Q56A06 836 aa20.59■□□□□ 0.89
Ebf3-201ENSMUST00000033378 P4ha1Q60715 534 aa20.59■□□□□ 0.89
Ebf3-201ENSMUST00000033378 Cdc5lQ6A068 802 aaKnown RBP20.59■□□□□ 0.89
Ebf3-201ENSMUST00000033378 Ccdc14Q8K2J4 934 aa20.59■□□□□ 0.89
Ebf3-201ENSMUST00000033378 Pcdha12Q91Y18 950 aa20.59■□□□□ 0.89
Ebf3-201ENSMUST00000033378 Xrcc4Q924T3 326 aa20.59■□□□□ 0.89
Ebf3-201ENSMUST00000033378 Panx2Q6IMP4 677 aa20.59■□□□□ 0.89
Ebf3-201ENSMUST00000033378 Gm2030D3Z7C4 212 aa20.59■□□□□ 0.89
Ebf3-201ENSMUST00000033378 Mapkapk5O54992 473 aa20.59■□□□□ 0.89
Ebf3-201ENSMUST00000033378 Arpp21Q9DCB4 807 aa20.59■□□□□ 0.89
Ebf3-201ENSMUST00000033378 Psma7Q9Z2U0 248 aa20.59■□□□□ 0.89
Ebf3-201ENSMUST00000033378 Abcc4E9Q236 1325 aa20.58■□□□□ 0.89
Ebf3-201ENSMUST00000033378 Tldc2A2ACG1 198 aa20.58■□□□□ 0.89
Ebf3-201ENSMUST00000033378 Skor2A7M7C7 1008 aa20.58■□□□□ 0.89
Ebf3-201ENSMUST00000033378 Art2aP17981 287 aa20.58■□□□□ 0.89
Ebf3-201ENSMUST00000033378 Fam228aQ8CDW1 299 aa20.58■□□□□ 0.89
Ebf3-201ENSMUST00000033378 Card14Q99KF0 999 aa20.58■□□□□ 0.89
Ebf3-201ENSMUST00000033378 Rsrc1Q9DBU6 334 aa20.58■□□□□ 0.89
Ebf3-201ENSMUST00000033378 Prl3d1P18121 224 aa20.58■□□□□ 0.88
Ebf3-201ENSMUST00000033378 Rps6ka1P18653 724 aa20.58■□□□□ 0.88
Ebf3-201ENSMUST00000033378 Foxp1P58462 705 aa20.58■□□□□ 0.88
Ebf3-201ENSMUST00000033378 Pym1Q8CHP5 203 aaKnown RBP20.58■□□□□ 0.88
Ebf3-201ENSMUST00000033378 Ttc14Q9CSP9 761 aa20.58■□□□□ 0.88
Ebf3-201ENSMUST00000033378 Acsl3Q9CZW4 720 aaKnown RBP20.58■□□□□ 0.88
Ebf3-201ENSMUST00000033378 Igsf1Q7TQA1 1317 aa20.58■□□□□ 0.88
Ebf3-201ENSMUST00000033378 Rnf216P58283 853 aa20.57■□□□□ 0.88
Ebf3-201ENSMUST00000033378 Nek5Q7TSC3 627 aa20.57■□□□□ 0.88
Ebf3-201ENSMUST00000033378 Rexo1Q7TT28 1213 aa20.57■□□□□ 0.88
Ebf3-201ENSMUST00000033378 Zcchc17Q9ESX4 241 aaKnown RBP20.57■□□□□ 0.88
Ebf3-201ENSMUST00000033378 Neurog2P70447 263 aa20.57■□□□□ 0.88
Ebf3-201ENSMUST00000033378 Zfp317Q8C0Q5 607 aa20.57■□□□□ 0.88
Ebf3-201ENSMUST00000033378 Cbx6Q9DBY5 414 aa20.57■□□□□ 0.88
Ebf3-201ENSMUST00000033378 Krt7Q9DCV7 457 aa20.57■□□□□ 0.88
Ebf3-201ENSMUST00000033378 Adgrl1Q80TR1 1466 aa20.57■□□□□ 0.88
Ebf3-201ENSMUST00000033378 Znf335A2A5K6 1337 aa20.57■□□□□ 0.88
Ebf3-201ENSMUST00000033378 Ptch1Q61115 1434 aa20.57■□□□□ 0.88
Ebf3-201ENSMUST00000033378 Ppp1r7Q3UM45 361 aa20.57■□□□□ 0.88
Ebf3-201ENSMUST00000033378 Spata2Q8K004 515 aa20.57■□□□□ 0.88
Ebf3-201ENSMUST00000033378 Diaph2O70566 1098 aa20.57■□□□□ 0.88
Ebf3-201ENSMUST00000033378 Mx1P09922 631 aa20.57■□□□□ 0.88
Ebf3-201ENSMUST00000033378 Herc4Q6PAV2 1057 aa20.57■□□□□ 0.88
Ebf3-201ENSMUST00000033378 Asic4Q7TNS7 539 aa20.57■□□□□ 0.88
Ebf3-201ENSMUST00000033378 Ccdc113Q8C5T8 377 aa20.57■□□□□ 0.88
Ebf3-201ENSMUST00000033378 Prr29B1ARI9 187 aa20.56■□□□□ 0.88
Ebf3-201ENSMUST00000033378 DgkiD3YWQ0 1071 aa20.56■□□□□ 0.88
Ebf3-201ENSMUST00000033378 Ankk1Q8BZ25 745 aa20.56■□□□□ 0.88
Ebf3-201ENSMUST00000033378 Lin9Q8C735 542 aa20.56■□□□□ 0.88
Ebf3-201ENSMUST00000033378 Slc4a8Q8JZR6 1089 aa20.56■□□□□ 0.88
Ebf3-201ENSMUST00000033378 Gdap1l1Q8VE33 370 aa20.56■□□□□ 0.88
Retrieved 100 of 22,080 RNA–protein pairs in 32.8 ms