RNA–Protein interactions for RNA: ENSMUST00000033088.7

Rnf40-201, Transcript of E3 ubiquitin-protein ligase BRE1B, mousemouse

TSL 5 BASIC

Gene Rnf40, Length 3,906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf40-201ENSMUST00000033088 Ccdc122Q8BVN0 290 aa12.03□□□□□ -0.48
Rnf40-201ENSMUST00000033088 Rint1Q8BZ36 792 aa12.03□□□□□ -0.48
Rnf40-201ENSMUST00000033088 Inpp5bQ8K337 993 aa12.03□□□□□ -0.48
Rnf40-201ENSMUST00000033088 Ubxn1Q922Y1 297 aa12.03□□□□□ -0.48
Rnf40-201ENSMUST00000033088 Krt23Q99PS0 422 aa12.03□□□□□ -0.48
Rnf40-201ENSMUST00000033088 Ctnnbl1Q9CWL8 563 aaKnown RBP12.03□□□□□ -0.48
Rnf40-201ENSMUST00000033088 Wdr64Q9D565 1086 aa12.03□□□□□ -0.48
Rnf40-201ENSMUST00000033088 Eef1dP57776 281 aaKnown RBP12.02□□□□□ -0.48
Rnf40-201ENSMUST00000033088 TxlnaQ6PAM1 554 aaKnown RBP12.02□□□□□ -0.48
Rnf40-201ENSMUST00000033088 4921504E06RikQ8CET2 560 aa12.02□□□□□ -0.48
Rnf40-201ENSMUST00000033088 Tcp11l2Q8K1H7 517 aa12.02□□□□□ -0.48
Rnf40-201ENSMUST00000033088 Exoc1Q8R3S6 894 aa12.02□□□□□ -0.48
Rnf40-201ENSMUST00000033088 Usp11Q99K46 921 aa12.02□□□□□ -0.48
Rnf40-201ENSMUST00000033088 Eef2kO08796 724 aa12.02□□□□□ -0.49
Rnf40-201ENSMUST00000033088 MarsQ68FL6 902 aaKnown RBP12.02□□□□□ -0.49
Rnf40-201ENSMUST00000033088 Tmx4Q8C0L0 335 aa12.02□□□□□ -0.49
Rnf40-201ENSMUST00000033088 Hgh1Q8C3I8 393 aa12.02□□□□□ -0.49
Rnf40-201ENSMUST00000033088 Ccdc7Q9D541 371 aa12.02□□□□□ -0.49
Rnf40-201ENSMUST00000033088 Prpf40aQ9R1C7 953 aaKnown RBP12.02□□□□□ -0.49
Rnf40-201ENSMUST00000033088 Aox1O54754 1333 aa12.02□□□□□ -0.49
Rnf40-201ENSMUST00000033088 Scn4aQ9ER60 1841 aa12.02□□□□□ -0.49
Rnf40-201ENSMUST00000033088 Hoxc9P09633 260 aa12.02□□□□□ -0.49
Rnf40-201ENSMUST00000033088 Gfpt1P47856 697 aa12.02□□□□□ -0.49
Rnf40-201ENSMUST00000033088 Efcab8Q8C9R9 203 aa12.02□□□□□ -0.49
Rnf40-201ENSMUST00000033088 Phf20l1Q8CCJ9 1013 aa12.02□□□□□ -0.49
Rnf40-201ENSMUST00000033088 Abt1Q9QYL7 269 aaKnown RBP12.02□□□□□ -0.49
Rnf40-201ENSMUST00000033088 Camta1A2A891 1682 aa12.01□□□□□ -0.49
Rnf40-201ENSMUST00000033088 Prpf38aQ4FK66 312 aaKnown RBP12.01□□□□□ -0.49
Rnf40-201ENSMUST00000033088 Hpcal4Q8BGZ1 191 aa12.01□□□□□ -0.49
Rnf40-201ENSMUST00000033088 Cplx3Q8R1B5 158 aa12.01□□□□□ -0.49
Rnf40-201ENSMUST00000033088 Dnajc10Q9DC23 793 aa12.01□□□□□ -0.49
Rnf40-201ENSMUST00000033088 Rad23aP54726 363 aa12.01□□□□□ -0.49
Rnf40-201ENSMUST00000033088 Ppp1r12cQ3UMT1 782 aa12.01□□□□□ -0.49
Rnf40-201ENSMUST00000033088 Gnat3Q3V3I2 354 aa12.01□□□□□ -0.49
Rnf40-201ENSMUST00000033088 Mcm7Q61881 719 aaKnown RBP12.01□□□□□ -0.49
Rnf40-201ENSMUST00000033088 Asic1Q6NXK8 526 aa12.01□□□□□ -0.49
Rnf40-201ENSMUST00000033088 Iffo1Q8BXL9 562 aa12.01□□□□□ -0.49
Rnf40-201ENSMUST00000033088 WtapQ9ER69 396 aa12.01□□□□□ -0.49
Rnf40-201ENSMUST00000033088 Stk38lQ7TSE6 464 aa12.01□□□□□ -0.49
Rnf40-201ENSMUST00000033088 Rassf10Q8BL43 508 aa12.01□□□□□ -0.49
Rnf40-201ENSMUST00000033088 Dis3l2Q8CI75 870 aaKnown RBP12.01□□□□□ -0.49
Rnf40-201ENSMUST00000033088 AW822073A0A0N4SUK1 652 aa12□□□□□ -0.49
Rnf40-201ENSMUST00000033088 Carmil2Q3V3V9 1296 aa12□□□□□ -0.49
Rnf40-201ENSMUST00000033088 EsrrbQ61539 433 aa12□□□□□ -0.49
Rnf40-201ENSMUST00000033088 Csrnp2Q8BGQ2 534 aa12□□□□□ -0.49
Rnf40-201ENSMUST00000033088 Osbpl1aQ91XL9 950 aa12□□□□□ -0.49
Rnf40-201ENSMUST00000033088 Mis18aQ9CZJ6 204 aa12□□□□□ -0.49
Rnf40-201ENSMUST00000033088 Col18a1P39061 1774 aa12□□□□□ -0.49
Rnf40-201ENSMUST00000033088 Ttll7A4Q9F0 912 aa12□□□□□ -0.49
Rnf40-201ENSMUST00000033088 Rad23bP54728 416 aa12□□□□□ -0.49
Rnf40-201ENSMUST00000033088 DbnlQ62418 436 aa12□□□□□ -0.49
Rnf40-201ENSMUST00000033088 Tcp10aQ80W76 438 aa12□□□□□ -0.49
Rnf40-201ENSMUST00000033088 EhhadhQ9DBM2 718 aa12□□□□□ -0.49
Rnf40-201ENSMUST00000033088 Dpf1Q9QX66 387 aa12□□□□□ -0.49
Rnf40-201ENSMUST00000033088 Mkrn1Q9QXP6 481 aa12□□□□□ -0.49
Rnf40-201ENSMUST00000033088 Uchl5Q9WUP7 329 aa12□□□□□ -0.49
Rnf40-201ENSMUST00000033088 Surf1P09925 306 aa12□□□□□ -0.49
Rnf40-201ENSMUST00000033088 Zfyve27Q3TXX3 415 aa12□□□□□ -0.49
Rnf40-201ENSMUST00000033088 Acbd5Q5XG73 508 aa12□□□□□ -0.49
Rnf40-201ENSMUST00000033088 Gja3Q64448 417 aa12□□□□□ -0.49
Rnf40-201ENSMUST00000033088 Naa35Q6PHQ8 725 aa12□□□□□ -0.49
Rnf40-201ENSMUST00000033088 SympkQ80X82 1284 aa12□□□□□ -0.49
Rnf40-201ENSMUST00000033088 AticQ9CWJ9 592 aaKnown RBP12□□□□□ -0.49
Rnf40-201ENSMUST00000033088 Fam186bD3Z420 943 aa11.99□□□□□ -0.49
Rnf40-201ENSMUST00000033088 Mcm5P49718 733 aa11.99□□□□□ -0.49
Rnf40-201ENSMUST00000033088 Atp6v1aP50516 617 aaKnown RBP11.99□□□□□ -0.49
Rnf40-201ENSMUST00000033088 Ssrp1Q08943 708 aaKnown RBP11.99□□□□□ -0.49
Rnf40-201ENSMUST00000033088 Ica1lQ3TY65 431 aa11.99□□□□□ -0.49
Rnf40-201ENSMUST00000033088 Mybpc2Q5XKE0 1136 aa11.99□□□□□ -0.49
Rnf40-201ENSMUST00000033088 CtifQ6PEE2 600 aaKnown RBP11.99□□□□□ -0.49
Rnf40-201ENSMUST00000033088 Lrsam1Q80ZI6 727 aa11.99□□□□□ -0.49
Rnf40-201ENSMUST00000033088 Ubac1Q8VDI7 409 aa11.99□□□□□ -0.49
Rnf40-201ENSMUST00000033088 AceP09470 1312 aa11.99□□□□□ -0.49
Rnf40-201ENSMUST00000033088 TnksQ6PFX9 1320 aa11.99□□□□□ -0.49
Rnf40-201ENSMUST00000033088 Nfatc2ipO09130 412 aa11.99□□□□□ -0.49
Rnf40-201ENSMUST00000033088 Ms4a2P20490 235 aa11.99□□□□□ -0.49
Rnf40-201ENSMUST00000033088 Xrcc6P23475 608 aa11.99□□□□□ -0.49
Rnf40-201ENSMUST00000033088 Ankk1Q8BZ25 745 aa11.99□□□□□ -0.49
Rnf40-201ENSMUST00000033088 Rtn1Q8K0T0 780 aa11.99□□□□□ -0.49
Rnf40-201ENSMUST00000033088 Parp14Q2EMV9 1817 aa11.99□□□□□ -0.49
Rnf40-201ENSMUST00000033088 Gm7347D3YYI9 267 aa11.99□□□□□ -0.49
Rnf40-201ENSMUST00000033088 Ccdc129Q14B48 1034 aa11.99□□□□□ -0.49
Rnf40-201ENSMUST00000033088 Gm28047Q3US59 414 aa11.99□□□□□ -0.49
Rnf40-201ENSMUST00000033088 NsmfQ99NF2 532 aa11.99□□□□□ -0.49
Rnf40-201ENSMUST00000033088 Apol7aB2RT54 418 aa11.98□□□□□ -0.49
Rnf40-201ENSMUST00000033088 Vsnl1P62761 191 aa11.98□□□□□ -0.49
Rnf40-201ENSMUST00000033088 Specc1Q5SXY1 1067 aa11.98□□□□□ -0.49
Rnf40-201ENSMUST00000033088 Acap3Q6NXL5 833 aa11.98□□□□□ -0.49
Rnf40-201ENSMUST00000033088 Tpcn2Q8BWC0 731 aa11.98□□□□□ -0.49
Rnf40-201ENSMUST00000033088 Ccdc14Q8K2J4 934 aa11.98□□□□□ -0.49
Rnf40-201ENSMUST00000033088 Pcdha7Q91Y13 937 aa11.98□□□□□ -0.49
Rnf40-201ENSMUST00000033088 Cbx6Q9DBY5 414 aa11.98□□□□□ -0.49
Rnf40-201ENSMUST00000033088 Gm28919A0A087WP35 240 aa11.98□□□□□ -0.49
Rnf40-201ENSMUST00000033088 Hmx1O70218 332 aa11.98□□□□□ -0.49
Rnf40-201ENSMUST00000033088 Gdap1O88741 358 aa11.98□□□□□ -0.49
Rnf40-201ENSMUST00000033088 Agbl1Q09M05 972 aa11.98□□□□□ -0.49
Rnf40-201ENSMUST00000033088 Tcp11l1Q8BTG3 509 aa11.98□□□□□ -0.49
Rnf40-201ENSMUST00000033088 Six6os1Q9CTN5 574 aa11.98□□□□□ -0.49
Rnf40-201ENSMUST00000033088 Efcc1Q9JJF6 558 aa11.98□□□□□ -0.49
Rnf40-201ENSMUST00000033088 Q32P12 615 aa11.98□□□□□ -0.49
Retrieved 100 of 22,080 RNA–protein pairs in 216.1 ms