RNA–Protein interactions for RNA: ENSMUST00000032487.13

Vamp1-201, Transcript of Vesicle-associated membrane protein 1, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Vamp1, Length 2,772 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vamp1-201ENSMUST00000032487 Telo2Q9DC40 840 aaKnown RBP13.18□□□□□ -0.3
Vamp1-201ENSMUST00000032487 Proca1B0QZF7 307 aa13.17□□□□□ -0.3
Vamp1-201ENSMUST00000032487 Ehd2Q8BH64 543 aa13.17□□□□□ -0.3
Vamp1-201ENSMUST00000032487 Kirrel3Q8BR86 778 aa13.17□□□□□ -0.3
Vamp1-201ENSMUST00000032487 Lrit1Q8K099 624 aa13.17□□□□□ -0.3
Vamp1-201ENSMUST00000032487 Hps3Q91VB4 1002 aa13.17□□□□□ -0.3
Vamp1-201ENSMUST00000032487 BaatQ91X34 420 aa13.17□□□□□ -0.3
Vamp1-201ENSMUST00000032487 Xrcc4Q924T3 326 aa13.17□□□□□ -0.3
Vamp1-201ENSMUST00000032487 Sugt1Q9CX34 336 aa13.17□□□□□ -0.3
Vamp1-201ENSMUST00000032487 Armc9Q9D2I5 817 aa13.17□□□□□ -0.3
Vamp1-201ENSMUST00000032487 Hmg20bQ9Z104 317 aa13.17□□□□□ -0.3
Vamp1-201ENSMUST00000032487 Q3TQI7 289 aaKnown RBP13.17□□□□□ -0.3
Vamp1-201ENSMUST00000032487 Kdm7aQ3UWM4 940 aa13.17□□□□□ -0.3
Vamp1-201ENSMUST00000032487 Cep112Q5PR68 954 aa13.17□□□□□ -0.3
Vamp1-201ENSMUST00000032487 Tsr1Q5SWD9 803 aa13.17□□□□□ -0.3
Vamp1-201ENSMUST00000032487 Lamb3Q61087 1168 aa13.17□□□□□ -0.3
Vamp1-201ENSMUST00000032487 Traf3ip3Q8C0G2 513 aa13.17□□□□□ -0.3
Vamp1-201ENSMUST00000032487 Chmp7Q8R1T1 451 aa13.17□□□□□ -0.3
Vamp1-201ENSMUST00000032487 Ahnak2E9PYB0 1738 aaKnown RBP13.17□□□□□ -0.3
Vamp1-201ENSMUST00000032487 Exoc4O35382 975 aa13.16□□□□□ -0.3
Vamp1-201ENSMUST00000032487 Rad23aP54726 363 aa13.16□□□□□ -0.3
Vamp1-201ENSMUST00000032487 Tax1bp1Q3UKC1 814 aaKnown RBP13.16□□□□□ -0.3
Vamp1-201ENSMUST00000032487 Mum1l1Q4VA55 681 aa13.16□□□□□ -0.3
Vamp1-201ENSMUST00000032487 Slc5a1Q8C3K6 665 aa13.16□□□□□ -0.3
Vamp1-201ENSMUST00000032487 ApobrQ8VBT6 942 aa13.16□□□□□ -0.3
Vamp1-201ENSMUST00000032487 Tulp1Q9Z273 543 aa13.16□□□□□ -0.3
Vamp1-201ENSMUST00000032487 Zfy1P10925 782 aa13.16□□□□□ -0.3
Vamp1-201ENSMUST00000032487 AppP12023 770 aa13.16□□□□□ -0.3
Vamp1-201ENSMUST00000032487 Surf6P70279 355 aaKnown RBP13.16□□□□□ -0.3
Vamp1-201ENSMUST00000032487 Mybpc2Q5XKE0 1136 aa13.16□□□□□ -0.3
Vamp1-201ENSMUST00000032487 Lrsam1Q80ZI6 727 aa13.16□□□□□ -0.3
Vamp1-201ENSMUST00000032487 Vmn1r218Q8R261 298 aa13.16□□□□□ -0.3
Vamp1-201ENSMUST00000032487 Tmc2Q8R4P4 888 aa13.16□□□□□ -0.3
Vamp1-201ENSMUST00000032487 Tc2nQ91XT6 489 aa13.16□□□□□ -0.3
Vamp1-201ENSMUST00000032487 Phkg2Q9DB30 406 aa13.16□□□□□ -0.3
Vamp1-201ENSMUST00000032487 Kank3Q9Z1P7 791 aa13.16□□□□□ -0.3
Vamp1-201ENSMUST00000032487 Knop1Q9Z2Q2 478 aaKnown RBP13.16□□□□□ -0.3
Vamp1-201ENSMUST00000032487 Pnpla7A2AJ88 1352 aa13.16□□□□□ -0.3
Vamp1-201ENSMUST00000032487 Foxn2E9Q7L6 429 aa13.15□□□□□ -0.3
Vamp1-201ENSMUST00000032487 GalcP54818 684 aa13.15□□□□□ -0.3
Vamp1-201ENSMUST00000032487 Gspt2Q149F3 632 aa13.15□□□□□ -0.3
Vamp1-201ENSMUST00000032487 Zbtb45Q52KG4 520 aa13.15□□□□□ -0.3
Vamp1-201ENSMUST00000032487 Esyt3Q5DTI8 891 aa13.15□□□□□ -0.3
Vamp1-201ENSMUST00000032487 ParnQ8VDG3 624 aa13.15□□□□□ -0.3
Vamp1-201ENSMUST00000032487 Uap1Q91YN5 522 aa13.15□□□□□ -0.3
Vamp1-201ENSMUST00000032487 Dctpp1Q9QY93 170 aa13.15□□□□□ -0.3
Vamp1-201ENSMUST00000032487 Ttc13A0A1L1SSC7 844 aa13.15□□□□□ -0.3
Vamp1-201ENSMUST00000032487 Pramel3A2AHA7 463 aa13.15□□□□□ -0.3
Vamp1-201ENSMUST00000032487 Gm7903A2AWL1 463 aa13.15□□□□□ -0.3
Vamp1-201ENSMUST00000032487 AV320801A2AWL3 467 aa13.15□□□□□ -0.3
Vamp1-201ENSMUST00000032487 Vmn2r78K7N6U5 853 aa13.15□□□□□ -0.3
Vamp1-201ENSMUST00000032487 Gm15023L7MUB4 467 aa13.15□□□□□ -0.3
Vamp1-201ENSMUST00000032487 Prpf38aQ4FK66 312 aaKnown RBP13.15□□□□□ -0.3
Vamp1-201ENSMUST00000032487 Stambpl1Q76N33 436 aa13.15□□□□□ -0.3
Vamp1-201ENSMUST00000032487 Klhl30Q8C3F7 581 aa13.15□□□□□ -0.3
Vamp1-201ENSMUST00000032487 Eif3hQ91WK2 352 aaKnown RBP13.15□□□□□ -0.3
Vamp1-201ENSMUST00000032487 Pdzd9Q9D9M4 266 aa13.15□□□□□ -0.3
Vamp1-201ENSMUST00000032487 Hsd3b7Q9EQC1 369 aa13.15□□□□□ -0.3
Vamp1-201ENSMUST00000032487 Ccdc6D3YZP9 469 aa13.15□□□□□ -0.31
Vamp1-201ENSMUST00000032487 Mdm2P23804 489 aa13.15□□□□□ -0.31
Vamp1-201ENSMUST00000032487 Myo1bP46735 1107 aa13.15□□□□□ -0.31
Vamp1-201ENSMUST00000032487 Pla2g4aP47713 748 aa13.15□□□□□ -0.31
Vamp1-201ENSMUST00000032487 Serpinb6dQ3UWK8 375 aa13.15□□□□□ -0.31
Vamp1-201ENSMUST00000032487 Ovgp1Q62010 721 aa13.15□□□□□ -0.31
Vamp1-201ENSMUST00000032487 Rps6ka6Q7TPS0 764 aa13.15□□□□□ -0.31
Vamp1-201ENSMUST00000032487 CgasQ8C6L5 507 aa13.15□□□□□ -0.31
Vamp1-201ENSMUST00000032487 Trim59Q922Y2 403 aa13.15□□□□□ -0.31
Vamp1-201ENSMUST00000032487 Cyp2d11P24457 504 aa13.14□□□□□ -0.31
Vamp1-201ENSMUST00000032487 Tmem165P52875 323 aa13.14□□□□□ -0.31
Vamp1-201ENSMUST00000032487 Sh3gl2Q62420 352 aa13.14□□□□□ -0.31
Vamp1-201ENSMUST00000032487 Ebag9Q9D0V7 213 aa13.14□□□□□ -0.31
Vamp1-201ENSMUST00000032487 Zbtb12Q9Z150 459 aa13.14□□□□□ -0.31
Vamp1-201ENSMUST00000032487 Large1Q9Z1M7 756 aa13.14□□□□□ -0.31
Vamp1-201ENSMUST00000032487 Snap23O09044 210 aa13.14□□□□□ -0.31
Vamp1-201ENSMUST00000032487 Psmb7P70195 277 aa13.14□□□□□ -0.31
Vamp1-201ENSMUST00000032487 Ccnl1Q52KE7 532 aaKnown RBP13.14□□□□□ -0.31
Vamp1-201ENSMUST00000032487 Tbc1d1Q60949 1255 aa13.14□□□□□ -0.31
Vamp1-201ENSMUST00000032487 Rnf187Q8BFX1 236 aa13.14□□□□□ -0.31
Vamp1-201ENSMUST00000032487 Zfp202Q8C879 641 aa13.14□□□□□ -0.31
Vamp1-201ENSMUST00000032487 Ndufab1Q9CR21 156 aa13.14□□□□□ -0.31
Vamp1-201ENSMUST00000032487 Foxp4Q9DBY0 795 aaKnown RBP13.14□□□□□ -0.31
Vamp1-201ENSMUST00000032487 Rgs9O54828 675 aa13.13□□□□□ -0.31
Vamp1-201ENSMUST00000032487 PnocQ64387 187 aa13.13□□□□□ -0.31
Vamp1-201ENSMUST00000032487 Asic4Q7TNS7 539 aa13.13□□□□□ -0.31
Vamp1-201ENSMUST00000032487 Naa25Q8BWZ3 972 aa13.13□□□□□ -0.31
Vamp1-201ENSMUST00000032487 Klhl40Q9D783 621 aa13.13□□□□□ -0.31
Vamp1-201ENSMUST00000032487 Il1rapl2Q9ERS6 686 aa13.13□□□□□ -0.31
Vamp1-201ENSMUST00000032487 Abcc4E9Q236 1325 aa13.13□□□□□ -0.31
Vamp1-201ENSMUST00000032487 Carmil3Q3UFQ8 1375 aa13.13□□□□□ -0.31
Vamp1-201ENSMUST00000032487 Ly75Q60767 1723 aa13.13□□□□□ -0.31
Vamp1-201ENSMUST00000032487 A0A1W2P6Q8 802 aa13.13□□□□□ -0.31
Vamp1-201ENSMUST00000032487 Gm9048A0A1W2P7H4 802 aa13.13□□□□□ -0.31
Vamp1-201ENSMUST00000032487 A0A1W2P7S8 802 aa13.13□□□□□ -0.31
Vamp1-201ENSMUST00000032487 A0A1W2P7Z8 802 aa13.13□□□□□ -0.31
Vamp1-201ENSMUST00000032487 Gm9046A0A1W2P855 802 aa13.13□□□□□ -0.31
Vamp1-201ENSMUST00000032487 Fbxl16A2RT62 479 aa13.13□□□□□ -0.31
Vamp1-201ENSMUST00000032487 Cdc5lQ6A068 802 aaKnown RBP13.13□□□□□ -0.31
Vamp1-201ENSMUST00000032487 Asnsd1Q8BFS9 627 aa13.13□□□□□ -0.31
Vamp1-201ENSMUST00000032487 Vps37cQ8R105 352 aa13.13□□□□□ -0.31
Vamp1-201ENSMUST00000032487 Gkap1Q9JMB0 366 aa13.13□□□□□ -0.31
Retrieved 100 of 22,080 RNA–protein pairs in 26.5 ms