RNA–Protein interactions for RNA: ENSMUST00000029139.8

Trim55-201, Transcript of MCG19772, mousemouse

APPRIS P1 TSL 2 BASIC

Gene Trim55, Length 2,595 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55-201ENSMUST00000029139 Atp6v0a4Q920R6 833 aa12.96□□□□□ -0.34
Trim55-201ENSMUST00000029139 Nop56Q9D6Z1 580 aaKnown RBP12.96□□□□□ -0.34
Trim55-201ENSMUST00000029139 Ccdc70Q9D9B0 223 aa12.96□□□□□ -0.34
Trim55-201ENSMUST00000029139 Krt27Q9Z320 448 aa12.96□□□□□ -0.34
Trim55-201ENSMUST00000029139 Map7d1A2AJI0 846 aa12.95□□□□□ -0.34
Trim55-201ENSMUST00000029139 Gm44G3UW88 330 aa12.95□□□□□ -0.34
Trim55-201ENSMUST00000029139 Dctn1O08788 1281 aa12.95□□□□□ -0.34
Trim55-201ENSMUST00000029139 Rrp1P56183 494 aaKnown RBP12.95□□□□□ -0.34
Trim55-201ENSMUST00000029139 Ppp2r5aQ6PD03 486 aa12.95□□□□□ -0.34
Trim55-201ENSMUST00000029139 Ccdc172Q810N9 267 aa12.95□□□□□ -0.34
Trim55-201ENSMUST00000029139 Plcd1Q8R3B1 756 aa12.95□□□□□ -0.34
Trim55-201ENSMUST00000029139 Heatr4E9Q357 955 aa12.95□□□□□ -0.34
Trim55-201ENSMUST00000029139 Washc5Q8C2E7 1159 aaKnown RBP12.95□□□□□ -0.34
Trim55-201ENSMUST00000029139 Magi2Q9WVQ1 1275 aa12.95□□□□□ -0.34
Trim55-201ENSMUST00000029139 Nfs1Q9Z1J3 459 aa12.95□□□□□ -0.34
Trim55-201ENSMUST00000029139 Scgb2b11A0A087WR49 112 aa12.94□□□□□ -0.34
Trim55-201ENSMUST00000029139 Sclt1G5E861 688 aa12.94□□□□□ -0.34
Trim55-201ENSMUST00000029139 Slc38a10Q5I012 1090 aa12.94□□□□□ -0.34
Trim55-201ENSMUST00000029139 Wdr44Q6NVE8 915 aa12.94□□□□□ -0.34
Trim55-201ENSMUST00000029139 Rufy1Q8BIJ7 712 aa12.94□□□□□ -0.34
Trim55-201ENSMUST00000029139 Gramd4Q8CB44 633 aa12.94□□□□□ -0.34
Trim55-201ENSMUST00000029139 SltmQ8CH25 1031 aaKnown RBP12.94□□□□□ -0.34
Trim55-201ENSMUST00000029139 Nsmce1Q9D720 266 aa12.94□□□□□ -0.34
Trim55-201ENSMUST00000029139 Cyp46a1Q9WVK8 500 aa12.94□□□□□ -0.34
Trim55-201ENSMUST00000029139 C3P01027 1663 aa12.94□□□□□ -0.34
Trim55-201ENSMUST00000029139 Plxnc1Q9QZC2 1574 aa12.94□□□□□ -0.34
Trim55-201ENSMUST00000029139 PnnO35691 725 aaKnown RBP12.94□□□□□ -0.34
Trim55-201ENSMUST00000029139 Leo1Q5XJE5 667 aa12.94□□□□□ -0.34
Trim55-201ENSMUST00000029139 Daam2Q80U19 1115 aa12.94□□□□□ -0.34
Trim55-201ENSMUST00000029139 3830417A13RikQ8BQJ2 303 aa12.94□□□□□ -0.34
Trim55-201ENSMUST00000029139 Als2cr12Q8BVM7 383 aa12.94□□□□□ -0.34
Trim55-201ENSMUST00000029139 Zswim4Q8C7B8 1101 aa12.94□□□□□ -0.34
Trim55-201ENSMUST00000029139 Ccdc159Q8C963 411 aa12.94□□□□□ -0.34
Trim55-201ENSMUST00000029139 DymQ8CHY3 669 aa12.94□□□□□ -0.34
Trim55-201ENSMUST00000029139 Mtmr6Q8VE11 617 aa12.94□□□□□ -0.34
Trim55-201ENSMUST00000029139 Kcnh3Q9WVJ0 1095 aa12.94□□□□□ -0.34
Trim55-201ENSMUST00000029139 Phldb3E9QAF4 648 aa12.93□□□□□ -0.34
Trim55-201ENSMUST00000029139 Smyd1P97443 490 aa12.93□□□□□ -0.34
Trim55-201ENSMUST00000029139 Flt3Q00342 1000 aa12.93□□□□□ -0.34
Trim55-201ENSMUST00000029139 Q3UPC7 1272 aa12.93□□□□□ -0.34
Trim55-201ENSMUST00000029139 Tsr1Q5SWD9 803 aa12.93□□□□□ -0.34
Trim55-201ENSMUST00000029139 Rab11fip4Q8BQP8 635 aa12.93□□□□□ -0.34
Trim55-201ENSMUST00000029139 Amigo3Q8C2S7 508 aa12.93□□□□□ -0.34
Trim55-201ENSMUST00000029139 P3h4Q8K2B0 443 aa12.93□□□□□ -0.34
Trim55-201ENSMUST00000029139 Nup133Q8R0G9 1155 aa12.93□□□□□ -0.34
Trim55-201ENSMUST00000029139 Irak4Q8R4K2 459 aa12.93□□□□□ -0.34
Trim55-201ENSMUST00000029139 NptxrQ99J85 493 aa12.93□□□□□ -0.34
Trim55-201ENSMUST00000029139 Gnl2Q99LH1 728 aaKnown RBP12.93□□□□□ -0.34
Trim55-201ENSMUST00000029139 Pold1P52431 1105 aa12.93□□□□□ -0.34
Trim55-201ENSMUST00000029139 Pde1cQ64338 706 aa12.93□□□□□ -0.34
Trim55-201ENSMUST00000029139 Maip1Q8BHE8 291 aa12.93□□□□□ -0.34
Trim55-201ENSMUST00000029139 Cdca8Q8BHX3 289 aa12.93□□□□□ -0.34
Trim55-201ENSMUST00000029139 Gpcpd1Q8C0L9 675 aa12.93□□□□□ -0.34
Trim55-201ENSMUST00000029139 Clstn2Q9ER65 966 aa12.93□□□□□ -0.34
Trim55-201ENSMUST00000029139 Abt1Q9QYL7 269 aaKnown RBP12.93□□□□□ -0.34
Trim55-201ENSMUST00000029139 GsdmeQ9Z2D3 512 aa12.93□□□□□ -0.34
Trim55-201ENSMUST00000029139 Etnk2A7MCT6 385 aa12.92□□□□□ -0.34
Trim55-201ENSMUST00000029139 Slfn8B1ARD8 910 aa12.92□□□□□ -0.34
Trim55-201ENSMUST00000029139 Tada2bD3Z4Z0 420 aaKnown RBP12.92□□□□□ -0.34
Trim55-201ENSMUST00000029139 Ppfibp2O35711 882 aa12.92□□□□□ -0.34
Trim55-201ENSMUST00000029139 Cracr2aQ3UP38 310 aa12.92□□□□□ -0.34
Trim55-201ENSMUST00000029139 Specc1Q5SXY1 1067 aa12.92□□□□□ -0.34
Trim55-201ENSMUST00000029139 Agtpbp1Q641K1 1218 aa12.92□□□□□ -0.34
Trim55-201ENSMUST00000029139 NostrinQ6WKZ7 506 aa12.92□□□□□ -0.34
Trim55-201ENSMUST00000029139 Larp1Q6ZQ58 1072 aaKnown RBP12.92□□□□□ -0.34
Trim55-201ENSMUST00000029139 Hgh1Q8C3I8 393 aa12.92□□□□□ -0.34
Trim55-201ENSMUST00000029139 Tshz3Q8CGV9 1081 aa12.92□□□□□ -0.34
Trim55-201ENSMUST00000029139 Erlin1Q91X78 346 aa12.92□□□□□ -0.34
Trim55-201ENSMUST00000029139 Rrp1bQ91YK2 724 aaKnown RBP12.92□□□□□ -0.34
Trim55-201ENSMUST00000029139 Mast1Q9R1L5 1570 aa12.92□□□□□ -0.34
Trim55-201ENSMUST00000029139 Abca17E9PX95 1733 aa12.92□□□□□ -0.34
Trim55-201ENSMUST00000029139 Arhgap6O54834 987 aa12.92□□□□□ -0.34
Trim55-201ENSMUST00000029139 Orc2Q60862 576 aaKnown RBP12.92□□□□□ -0.34
Trim55-201ENSMUST00000029139 Cep104Q80V31 926 aa12.92□□□□□ -0.34
Trim55-201ENSMUST00000029139 AarsQ8BGQ7 968 aa12.92□□□□□ -0.34
Trim55-201ENSMUST00000029139 Coq6Q8R1S0 476 aa12.92□□□□□ -0.34
Trim55-201ENSMUST00000029139 Psmd6Q99JI4 389 aa12.92□□□□□ -0.34
Trim55-201ENSMUST00000029139 Rufy3Q9D394 469 aa12.92□□□□□ -0.34
Trim55-201ENSMUST00000029139 Sos1Q62245 1319 aa12.92□□□□□ -0.34
Trim55-201ENSMUST00000029139 Ankrd50F7BE84 1390 aa12.92□□□□□ -0.34
Trim55-201ENSMUST00000029139 Cul4bA2A432 970 aaKnown RBP12.91□□□□□ -0.34
Trim55-201ENSMUST00000029139 Slfn9B1ARD6 910 aa12.91□□□□□ -0.34
Trim55-201ENSMUST00000029139 Qtrt2B8ZXI1 415 aa12.91□□□□□ -0.34
Trim55-201ENSMUST00000029139 Apaf1O88879 1249 aa12.91□□□□□ -0.34
Trim55-201ENSMUST00000029139 Slc12a2P55012 1205 aa12.91□□□□□ -0.34
Trim55-201ENSMUST00000029139 NcstnP57716 708 aa12.91□□□□□ -0.34
Trim55-201ENSMUST00000029139 FerP70451 823 aa12.91□□□□□ -0.34
Trim55-201ENSMUST00000029139 Gm1604bQ3TRG0 118 aa12.91□□□□□ -0.34
Trim55-201ENSMUST00000029139 Zfp113Q8C689 439 aa12.91□□□□□ -0.34
Trim55-201ENSMUST00000029139 Aipl1Q924K1 328 aa12.91□□□□□ -0.34
Trim55-201ENSMUST00000029139 Lrrc34Q9DAM1 415 aa12.91□□□□□ -0.34
Trim55-201ENSMUST00000029139 Zkscan2G3X952 960 aa12.91□□□□□ -0.34
Trim55-201ENSMUST00000029139 VimP20152 466 aaKnown RBP12.91□□□□□ -0.34
Trim55-201ENSMUST00000029139 GnaqP21279 359 aa12.91□□□□□ -0.34
Trim55-201ENSMUST00000029139 Eif5P59325 429 aaKnown RBP12.91□□□□□ -0.34
Trim55-201ENSMUST00000029139 Traf5P70191 558 aa12.91□□□□□ -0.34
Trim55-201ENSMUST00000029139 Snd1Q78PY7 910 aaKnown RBP12.91□□□□□ -0.34
Trim55-201ENSMUST00000029139 Ccdc181Q80ZU5 509 aa12.91□□□□□ -0.34
Trim55-201ENSMUST00000029139 Clec4gQ8BNX1 294 aa12.91□□□□□ -0.34
Trim55-201ENSMUST00000029139 Lrrc45Q8CIM1 670 aa12.91□□□□□ -0.34
Retrieved 100 of 22,080 RNA–protein pairs in 42.1 ms