RNA–Protein interactions for RNA: ENSMUST00000098548.7

Scn1b-201, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scn1b, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-201ENSMUST00000098548 Ighv1-75A0A075B5Y2 117 aa16.89■□□□□ 0.3
Scn1b-201ENSMUST00000098548 Gm5218F6YH22 154 aa16.89■□□□□ 0.3
Scn1b-201ENSMUST00000098548 Tnfsf18Q7TS55 173 aa16.89■□□□□ 0.3
Scn1b-201ENSMUST00000098548 Olfr317Q5NCD6 327 aa16.89■□□□□ 0.29
Scn1b-201ENSMUST00000098548 Gpr82Q8BZR0 328 aa16.89■□□□□ 0.29
Scn1b-201ENSMUST00000098548 Fam241bQ9D882 120 aa16.89■□□□□ 0.29
Scn1b-201ENSMUST00000098548 Ighv2-7A0A075B5Q8 116 aa16.88■□□□□ 0.29
Scn1b-201ENSMUST00000098548 Trbv17A0A140T8P8 114 aa16.88■□□□□ 0.29
Scn1b-201ENSMUST00000098548 Gm7138L7N2C3 230 aa16.88■□□□□ 0.29
Scn1b-201ENSMUST00000098548 Olfr1339Q8VGB1 315 aa16.88■□□□□ 0.29
Scn1b-201ENSMUST00000098548 PerpQ9JK95 193 aa16.88■□□□□ 0.29
Scn1b-201ENSMUST00000098548 Gm3238W4VSP7 230 aa16.88■□□□□ 0.29
Scn1b-201ENSMUST00000098548 Brwd1Q921C3 2304 aa16.88■□□□□ 0.29
Scn1b-201ENSMUST00000098548 Hivep3A2A884 2348 aa16.87■□□□□ 0.29
Scn1b-201ENSMUST00000098548 Ly6c2P0CW03 131 aa16.87■□□□□ 0.29
Scn1b-201ENSMUST00000098548 Gphb5Q812B2 130 aa16.87■□□□□ 0.29
Scn1b-201ENSMUST00000098548 RnasekQ8K3C0 98 aa16.87■□□□□ 0.29
Scn1b-201ENSMUST00000098548 Ighv3-3A0A0A6YWL2 116 aa16.86■□□□□ 0.29
Scn1b-201ENSMUST00000098548 Fhl2O70433 279 aa16.86■□□□□ 0.29
Scn1b-201ENSMUST00000098548 Wfdc15aQ8BH89 80 aa16.86■□□□□ 0.29
Scn1b-201ENSMUST00000098548 Npc2Q9Z0J0 149 aa16.86■□□□□ 0.29
Scn1b-201ENSMUST00000098548 Gm26938S4R185 226 aa16.86■□□□□ 0.29
Scn1b-201ENSMUST00000098548 Olfr311Q5NC59 308 aa16.85■□□□□ 0.29
Scn1b-201ENSMUST00000098548 Pcp4l1Q6W8Q3 68 aa16.85■□□□□ 0.29
Scn1b-201ENSMUST00000098548 Olfr312Q7TRZ9 308 aa16.85■□□□□ 0.29
Scn1b-201ENSMUST00000098548 Klk15Q8CGR4 254 aa16.85■□□□□ 0.29
Scn1b-201ENSMUST00000098548 Olfr1367Q8VFG2 316 aa16.85■□□□□ 0.29
Scn1b-201ENSMUST00000098548 EpcamQ99JW5 315 aa16.85■□□□□ 0.29
Scn1b-201ENSMUST00000098548 Srrm2Q8BTI8 2703 aaKnown RBP16.85■□□□□ 0.29
Scn1b-201ENSMUST00000098548 Ighv2-3A0A075B696 115 aa16.85■□□□□ 0.29
Scn1b-201ENSMUST00000098548 Esp38A8R0X1 80 aa16.85■□□□□ 0.29
Scn1b-201ENSMUST00000098548 Gm7137J3QMW1 236 aa16.85■□□□□ 0.29
Scn1b-201ENSMUST00000098548 Sap30O88574 220 aa16.85■□□□□ 0.29
Scn1b-201ENSMUST00000098548 Trbv30A0A0B4J1P1 111 aa16.84■□□□□ 0.29
Scn1b-201ENSMUST00000098548 IqcjQ8BPW0 110 aa16.84■□□□□ 0.29
Scn1b-201ENSMUST00000098548 Mrpl20Q9CQL4 149 aa16.84■□□□□ 0.29
Scn1b-201ENSMUST00000098548 Ighv1-63A0A075B5X2 117 aa16.83■□□□□ 0.28
Scn1b-201ENSMUST00000098548 4930447F04RikA2AFR2 126 aa16.83■□□□□ 0.28
Scn1b-201ENSMUST00000098548 Gm28038F7BCN9 126 aa16.83■□□□□ 0.28
Scn1b-201ENSMUST00000098548 P01793 123 aa16.83■□□□□ 0.28
Scn1b-201ENSMUST00000098548 Psmg4P0C7N9 123 aa16.83■□□□□ 0.28
Scn1b-201ENSMUST00000098548 Shisal1Q0VBP7 198 aa16.83■□□□□ 0.28
Scn1b-201ENSMUST00000098548 Rnf152Q8BG47 203 aa16.82■□□□□ 0.28
Scn1b-201ENSMUST00000098548 4930564D02RikQ9D4S4 103 aa16.82■□□□□ 0.28
Scn1b-201ENSMUST00000098548 Rabac1Q9Z0S9 185 aa16.82■□□□□ 0.28
Scn1b-201ENSMUST00000098548 Notch3Q61982 2318 aa16.82■□□□□ 0.28
Scn1b-201ENSMUST00000098548 Ighv3-8A0A075B5T0 131 aa16.81■□□□□ 0.28
Scn1b-201ENSMUST00000098548 Cdx4Q07424 282 aa16.81■□□□□ 0.28
Scn1b-201ENSMUST00000098548 Ndufb4Q9CQC7 129 aa16.81■□□□□ 0.28
Scn1b-201ENSMUST00000098548 Tex54G3UW99 86 aa16.81■□□□□ 0.28
Scn1b-201ENSMUST00000098548 Fam19a2Q7TPG7 131 aa16.81■□□□□ 0.28
Scn1b-201ENSMUST00000098548 Spink2Q8BMY7 86 aa16.81■□□□□ 0.28
Scn1b-201ENSMUST00000098548 PdfS4R2K0 231 aa16.81■□□□□ 0.28
Scn1b-201ENSMUST00000098548 Ifitm2Q99J93 144 aa16.8■□□□□ 0.28
Scn1b-201ENSMUST00000098548 Slc25a2Q99ML6 265 aa16.8■□□□□ 0.28
Scn1b-201ENSMUST00000098548 Gm3443F7CCV5 94 aa16.79■□□□□ 0.28
Scn1b-201ENSMUST00000098548 P01756 117 aa16.79■□□□□ 0.28
Scn1b-201ENSMUST00000098548 P01757 117 aa16.79■□□□□ 0.28
Scn1b-201ENSMUST00000098548 9130213A22RikQ3V3T2 120 aa16.79■□□□□ 0.28
Scn1b-201ENSMUST00000098548 Olfr761Q7TRJ0 323 aa16.79■□□□□ 0.28
Scn1b-201ENSMUST00000098548 Igkv4-62A0A0G2JDW9 117 aa16.78■□□□□ 0.28
Scn1b-201ENSMUST00000098548 Klk1b4P00757 256 aa16.78■□□□□ 0.28
Scn1b-201ENSMUST00000098548 Cphx2Q8BX39 182 aa16.78■□□□□ 0.28
Scn1b-201ENSMUST00000098548 ApcQ61315 2845 aa16.78■□□□□ 0.28
Scn1b-201ENSMUST00000098548 Trav9-2A0A075B647 113 aa16.77■□□□□ 0.28
Scn1b-201ENSMUST00000098548 Trav9-4A0A0B4J1K2 113 aa16.77■□□□□ 0.28
Scn1b-201ENSMUST00000098548 S100a4P07091 101 aa16.77■□□□□ 0.28
Scn1b-201ENSMUST00000098548 Olfr1262Q8VGN2 304 aa16.77■□□□□ 0.28
Scn1b-201ENSMUST00000098548 Lamtor2Q9JHS3 125 aa16.77■□□□□ 0.28
Scn1b-201ENSMUST00000098548 Tex26Q0VB26 296 aa16.77■□□□□ 0.27
Scn1b-201ENSMUST00000098548 Map1lc3aQ91VR7 121 aa16.77■□□□□ 0.27
Scn1b-201ENSMUST00000098548 Plpp2Q9DAX2 276 aa16.77■□□□□ 0.27
Scn1b-201ENSMUST00000098548 TroQ6DIC6 2087 aa16.76■□□□□ 0.27
Scn1b-201ENSMUST00000098548 FcgbpE9Q0B5 2583 aa16.76■□□□□ 0.27
Scn1b-201ENSMUST00000098548 Reg3gO09049 174 aa16.76■□□□□ 0.27
Scn1b-201ENSMUST00000098548 Tcf21O35437 179 aa16.76■□□□□ 0.27
Scn1b-201ENSMUST00000098548 Thy1P01831 162 aa16.76■□□□□ 0.27
Scn1b-201ENSMUST00000098548 Timm8bP62077 83 aaKnown RBP16.76■□□□□ 0.27
Scn1b-201ENSMUST00000098548 SnrpcQ62241 159 aa16.76■□□□□ 0.27
Scn1b-201ENSMUST00000098548 Tmem14cQ9CQN6 114 aa16.76■□□□□ 0.27
Scn1b-201ENSMUST00000098548 Gm12845A0A0N4SUM5 588 aa16.75■□□□□ 0.27
Scn1b-201ENSMUST00000098548 Ins1P01325 108 aa16.75■□□□□ 0.27
Scn1b-201ENSMUST00000098548 H2-DMb1P35737 261 aa16.75■□□□□ 0.27
Scn1b-201ENSMUST00000098548 Trav14n-2A0A0G2JDF5 121 aa16.74■□□□□ 0.27
Scn1b-201ENSMUST00000098548 Omt2bD3YX29 119 aa16.74■□□□□ 0.27
Scn1b-201ENSMUST00000098548 1810032O08RikE9PZV8 113 aa16.74■□□□□ 0.27
Scn1b-201ENSMUST00000098548 Gm7489Q3UT34 171 aa16.74■□□□□ 0.27
Scn1b-201ENSMUST00000098548 Mrpl36Q99N90 102 aa16.74■□□□□ 0.27
Scn1b-201ENSMUST00000098548 Scgb1b15A0A087WP50 93 aa16.73■□□□□ 0.27
Scn1b-201ENSMUST00000098548 NpbQ8K4P1 119 aa16.73■□□□□ 0.27
Scn1b-201ENSMUST00000098548 Rnf185Q91YT2 192 aa16.73■□□□□ 0.27
Scn1b-201ENSMUST00000098548 Gpx7Q99LJ6 186 aa16.73■□□□□ 0.27
Scn1b-201ENSMUST00000098548 1520401A03RikA0A0J9YVH6 598 aa16.72■□□□□ 0.27
Scn1b-201ENSMUST00000098548 Gm5426J3QNM7 103 aa16.72■□□□□ 0.27
Scn1b-201ENSMUST00000098548 Olfr1195Q8VG21 308 aa16.72■□□□□ 0.27
Scn1b-201ENSMUST00000098548 Fam103a1Q9CQY2 119 aaKnown RBP16.72■□□□□ 0.27
Scn1b-201ENSMUST00000098548 TnxbO35452 4006 aa16.71■□□□□ 0.27
Scn1b-201ENSMUST00000098548 Fndc10A2A9Q0 223 aa16.71■□□□□ 0.27
Scn1b-201ENSMUST00000098548 Ighv8-6A0A0A6YXA3 118 aa16.7■□□□□ 0.26
Scn1b-201ENSMUST00000098548 A730046J19RikA0A1B0GSN8 89 aa16.7■□□□□ 0.26
Retrieved 100 of 22,080 RNA–protein pairs in 33.1 ms