RNA–Protein interactions for RNA: ENSMUST00000070797.6

Pcdha1-201, Transcript of Protocadherin alpha 1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Pcdha1, Length 5,248 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1-201ENSMUST00000070797 Ighv1-77A0A0G2JGS9 117 aa11.49□□□□□ -0.57
Pcdha1-201ENSMUST00000070797 1700084M14RikB1AT01 78 aa11.49□□□□□ -0.57
Pcdha1-201ENSMUST00000070797 Q08AU9 97 aa11.49□□□□□ -0.57
Pcdha1-201ENSMUST00000070797 Gm9961Q8BNV2 113 aa11.49□□□□□ -0.57
Pcdha1-201ENSMUST00000070797 Glrp1E9Q9S8 174 aa11.49□□□□□ -0.57
Pcdha1-201ENSMUST00000070797 NpbQ8K4P1 119 aa11.49□□□□□ -0.57
Pcdha1-201ENSMUST00000070797 Dock3Q8CIQ7 2027 aa11.49□□□□□ -0.57
Pcdha1-201ENSMUST00000070797 Trbv30A0A0B4J1P1 111 aa11.49□□□□□ -0.57
Pcdha1-201ENSMUST00000070797 Gm5941Q497P9 117 aa11.49□□□□□ -0.57
Pcdha1-201ENSMUST00000070797 Trav11A0A0B4J1J9 114 aa11.48□□□□□ -0.57
Pcdha1-201ENSMUST00000070797 Igkv6-15A0A140T8M5 115 aa11.48□□□□□ -0.57
Pcdha1-201ENSMUST00000070797 Gp9O88186 177 aa11.48□□□□□ -0.57
Pcdha1-201ENSMUST00000070797 Ntf4Q80VU4 209 aa11.48□□□□□ -0.57
Pcdha1-201ENSMUST00000070797 Brk1Q91VR8 75 aa11.48□□□□□ -0.57
Pcdha1-201ENSMUST00000070797 SelenowP63300 88 aa11.48□□□□□ -0.57
Pcdha1-201ENSMUST00000070797 Msrb2Q78J03 175 aa11.48□□□□□ -0.57
Pcdha1-201ENSMUST00000070797 Igkv4-57-1A0A075B5M4 119 aa11.48□□□□□ -0.57
Pcdha1-201ENSMUST00000070797 C920008G01RikA0A0B4J1N1 112 aa11.48□□□□□ -0.57
Pcdha1-201ENSMUST00000070797 Igkv4-81A0A0G2JEY5 119 aa11.48□□□□□ -0.57
Pcdha1-201ENSMUST00000070797 Mrps12O35680 139 aa11.48□□□□□ -0.57
Pcdha1-201ENSMUST00000070797 Acyp1P56376 99 aa11.48□□□□□ -0.57
Pcdha1-201ENSMUST00000070797 Cox17P56394 63 aa11.48□□□□□ -0.57
Pcdha1-201ENSMUST00000070797 Plxnb3Q9QY40 1902 aa11.48□□□□□ -0.57
Pcdha1-201ENSMUST00000070797 Snrnp200Q6P4T2 2136 aaKnown RBP11.47□□□□□ -0.57
Pcdha1-201ENSMUST00000070797 5730522E02RikQ5SP45 163 aa11.47□□□□□ -0.57
Pcdha1-201ENSMUST00000070797 Prr3Q811B5 190 aaKnown RBP11.47□□□□□ -0.57
Pcdha1-201ENSMUST00000070797 Dock7Q8R1A4 2130 aaKnown RBP11.46□□□□□ -0.57
Pcdha1-201ENSMUST00000070797 Pip4p2Q9CZX7 257 aa11.46□□□□□ -0.57
Pcdha1-201ENSMUST00000070797 Tmem210Q9D2F0 147 aa11.46□□□□□ -0.57
Pcdha1-201ENSMUST00000070797 MpdzQ8VBX6 2055 aa11.46□□□□□ -0.58
Pcdha1-201ENSMUST00000070797 Gm15128A2ADW8 449 aa11.45□□□□□ -0.58
Pcdha1-201ENSMUST00000070797 Spink8Q09TK9 105 aa11.45□□□□□ -0.58
Pcdha1-201ENSMUST00000070797 Pfn2Q9JJV2 140 aa11.45□□□□□ -0.58
Pcdha1-201ENSMUST00000070797 Ccl24Q9JKC0 119 aa11.45□□□□□ -0.58
Pcdha1-201ENSMUST00000070797 Plxnd1Q3UH93 1925 aa11.45□□□□□ -0.58
Pcdha1-201ENSMUST00000070797 Trav7-6A0A075B640 112 aa11.45□□□□□ -0.58
Pcdha1-201ENSMUST00000070797 MsmpB1AWI6 139 aa11.45□□□□□ -0.58
Pcdha1-201ENSMUST00000070797 PemtQ61907 199 aa11.45□□□□□ -0.58
Pcdha1-201ENSMUST00000070797 BC048502Q80Y74 154 aa11.45□□□□□ -0.58
Pcdha1-201ENSMUST00000070797 Ndufa12Q7TMF3 145 aaKnown RBP11.45□□□□□ -0.58
Pcdha1-201ENSMUST00000070797 Lst1O08843 95 aa11.44□□□□□ -0.58
Pcdha1-201ENSMUST00000070797 Il19Q8CJ70 176 aa11.44□□□□□ -0.58
Pcdha1-201ENSMUST00000070797 IgipA0A1B0GR74 53 aa11.44□□□□□ -0.58
Pcdha1-201ENSMUST00000070797 Col24a1Q30D77 1733 aa11.43□□□□□ -0.58
Pcdha1-201ENSMUST00000070797 BtcQ05928 177 aa11.43□□□□□ -0.58
Pcdha1-201ENSMUST00000070797 Gm10775Q3V290 127 aa11.43□□□□□ -0.58
Pcdha1-201ENSMUST00000070797 Gm14137Q8CE97 175 aa11.43□□□□□ -0.58
Pcdha1-201ENSMUST00000070797 AngP21570 145 aa11.43□□□□□ -0.58
Pcdha1-201ENSMUST00000070797 Ube2e1P52482 193 aa11.43□□□□□ -0.58
Pcdha1-201ENSMUST00000070797 Fhl4Q8CDC8 279 aa11.43□□□□□ -0.58
Pcdha1-201ENSMUST00000070797 Gm17455G3UW87 128 aa11.43□□□□□ -0.58
Pcdha1-201ENSMUST00000070797 Fgf6P21658 208 aa11.43□□□□□ -0.58
Pcdha1-201ENSMUST00000070797 Ighv1-64A0A075B5X3 117 aa11.43□□□□□ -0.58
Pcdha1-201ENSMUST00000070797 Wfdc11A2A5H7 82 aa11.43□□□□□ -0.58
Pcdha1-201ENSMUST00000070797 Gm17359A0A0G2JEB7 487 aa11.42□□□□□ -0.58
Pcdha1-201ENSMUST00000070797 Igkv1-99F6XWB2 120 aa11.42□□□□□ -0.58
Pcdha1-201ENSMUST00000070797 Cd59aO55186 123 aa11.42□□□□□ -0.58
Pcdha1-201ENSMUST00000070797 Eml5Q8BQM8 1977 aa11.42□□□□□ -0.58
Pcdha1-201ENSMUST00000070797 Trav9d-4A0A0G2JG37 103 aa11.42□□□□□ -0.58
Pcdha1-201ENSMUST00000070797 Myo9bQ9QY06 2114 aa11.42□□□□□ -0.58
Pcdha1-201ENSMUST00000070797 Gm10192Q3V0S1 108 aa11.42□□□□□ -0.58
Pcdha1-201ENSMUST00000070797 Igkv8-24A0A140T8P5 121 aa11.41□□□□□ -0.58
Pcdha1-201ENSMUST00000070797 P04943 107 aa11.41□□□□□ -0.58
Pcdha1-201ENSMUST00000070797 Lrcol1Q3URS3 161 aa11.41□□□□□ -0.58
Pcdha1-201ENSMUST00000070797 Spink12Q9D256 87 aa11.41□□□□□ -0.58
Pcdha1-201ENSMUST00000070797 TprF6ZDS4 2431 aaKnown RBP11.41□□□□□ -0.58
Pcdha1-201ENSMUST00000070797 Trav14d-3-dv8A0A075B619 120 aa11.41□□□□□ -0.58
Pcdha1-201ENSMUST00000070797 Ighv5-9-1A0A0A6YVS4 126 aa11.41□□□□□ -0.58
Pcdha1-201ENSMUST00000070797 Igkv4-68A0A0B4J1I7 117 aa11.41□□□□□ -0.58
Pcdha1-201ENSMUST00000070797 Pcdh15Q99PJ1 1943 aa11.41□□□□□ -0.58
Pcdha1-201ENSMUST00000070797 P04944 107 aa11.41□□□□□ -0.58
Pcdha1-201ENSMUST00000070797 1500011B03RikQ3TTH7 73 aa11.41□□□□□ -0.58
Pcdha1-201ENSMUST00000070797 Odf3Q920N1 254 aa11.41□□□□□ -0.58
Pcdha1-201ENSMUST00000070797 Tmem52Q9D702 196 aa11.41□□□□□ -0.58
Pcdha1-201ENSMUST00000070797 Ang4Q3TMQ6 144 aa11.41□□□□□ -0.58
Pcdha1-201ENSMUST00000070797 Atg2bQ80XK6 2075 aa11.4□□□□□ -0.58
Pcdha1-201ENSMUST00000070797 GrnP28798 589 aaKnown RBP11.4□□□□□ -0.58
Pcdha1-201ENSMUST00000070797 Snai3Q9QY31 287 aa11.4□□□□□ -0.58
Pcdha1-201ENSMUST00000070797 PtprsB0V2N1 1907 aa11.4□□□□□ -0.58
Pcdha1-201ENSMUST00000070797 Ighv8-12A0A0G2JDE1 119 aa11.4□□□□□ -0.58
Pcdha1-201ENSMUST00000070797 Gpr179E9PY61 2293 aa11.39□□□□□ -0.59
Pcdha1-201ENSMUST00000070797 Vpreb2P13373 142 aa11.39□□□□□ -0.59
Pcdha1-201ENSMUST00000070797 Defb29Q8BGW9 78 aa11.39□□□□□ -0.59
Pcdha1-201ENSMUST00000070797 Fancd2osQ9D4K4 178 aa11.39□□□□□ -0.59
Pcdha1-201ENSMUST00000070797 Obox8V9GWY9 217 aa11.39□□□□□ -0.59
Pcdha1-201ENSMUST00000070797 Ighv1-74A0A0G2JGK2 117 aa11.39□□□□□ -0.59
Pcdha1-201ENSMUST00000070797 Ccl19O70460 108 aa11.39□□□□□ -0.59
Pcdha1-201ENSMUST00000070797 Igf1P05017 153 aa11.39□□□□□ -0.59
Pcdha1-201ENSMUST00000070797 Prok1Q14A28 105 aa11.39□□□□□ -0.59
Pcdha1-201ENSMUST00000070797 Ndufb4Q9CQC7 129 aa11.39□□□□□ -0.59
Pcdha1-201ENSMUST00000070797 Ighv1-50A0A075B5W1 117 aa11.38□□□□□ -0.59
Pcdha1-201ENSMUST00000070797 Ighv8-5A0A0A6YY60 119 aa11.38□□□□□ -0.59
Pcdha1-201ENSMUST00000070797 Tmem254aP0DN89 123 aa11.38□□□□□ -0.59
Pcdha1-201ENSMUST00000070797 Tmem254bP0DN90 123 aa11.38□□□□□ -0.59
Pcdha1-201ENSMUST00000070797 Tmem254cP0DN91 123 aa11.38□□□□□ -0.59
Pcdha1-201ENSMUST00000070797 Gm42674D3YUT9 64 aa11.38□□□□□ -0.59
Pcdha1-201ENSMUST00000070797 Hoxd3P09027 433 aa11.38□□□□□ -0.59
Pcdha1-201ENSMUST00000070797 Mrpl35Q9CQL6 188 aa11.38□□□□□ -0.59
Pcdha1-201ENSMUST00000070797 MgamB5THE2 1827 aa11.38□□□□□ -0.59
Pcdha1-201ENSMUST00000070797 Gm20730A0A075B5J6 119 aa11.38□□□□□ -0.59
Retrieved 100 of 22,080 RNA–protein pairs in 27 ms