RNA–Protein interactions for RNA: ENSMUST00000035911.4

Rc3h1-201, Transcript of Roquin-1, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Rc3h1, Length 3,476 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1-201ENSMUST00000035911 Ubald2Q8BQH4 164 aa4.42□□□□□ -1.7
Rc3h1-201ENSMUST00000035911 Frem1Q684R7 2191 aa4.42□□□□□ -1.7
Rc3h1-201ENSMUST00000035911 Gm29423A0A087WRM1 55 aa4.41□□□□□ -1.7
Rc3h1-201ENSMUST00000035911 P04946 108 aa4.41□□□□□ -1.7
Rc3h1-201ENSMUST00000035911 S100a4P07091 101 aa4.41□□□□□ -1.7
Rc3h1-201ENSMUST00000035911 Atp5g3P56384 141 aa4.41□□□□□ -1.7
Rc3h1-201ENSMUST00000035911 Mllt11P97783 90 aa4.41□□□□□ -1.7
Rc3h1-201ENSMUST00000035911 Clpsl2Q3UW21 102 aa4.41□□□□□ -1.7
Rc3h1-201ENSMUST00000035911 Rps21Q9CQR2 83 aaKnown RBP4.41□□□□□ -1.7
Rc3h1-201ENSMUST00000035911 Tmem89Q9DA04 169 aa4.41□□□□□ -1.7
Rc3h1-201ENSMUST00000035911 Phlda3Q9WV95 125 aa4.41□□□□□ -1.7
Rc3h1-201ENSMUST00000035911 Celsr3Q91ZI0 3301 aa4.41□□□□□ -1.7
Rc3h1-201ENSMUST00000035911 Pcnx1Q9QYC1 2344 aa4.41□□□□□ -1.7
Rc3h1-201ENSMUST00000035911 Trav21-dv12A0A075B6C4 109 aa4.41□□□□□ -1.7
Rc3h1-201ENSMUST00000035911 Igkv2-137A0A0B4J1H6 120 aa4.41□□□□□ -1.7
Rc3h1-201ENSMUST00000035911 Gm2174F6ZVF2 133 aa4.41□□□□□ -1.7
Rc3h1-201ENSMUST00000035911 Rnf5O35445 180 aa4.41□□□□□ -1.7
Rc3h1-201ENSMUST00000035911 Znf239P24399 201 aa4.41□□□□□ -1.7
Rc3h1-201ENSMUST00000035911 Foxi2Q3I5G5 311 aa4.41□□□□□ -1.7
Rc3h1-201ENSMUST00000035911 Ctsll3Q3ULP7 331 aa4.41□□□□□ -1.7
Rc3h1-201ENSMUST00000035911 Rnase2aQ8K196 155 aa4.41□□□□□ -1.7
Rc3h1-201ENSMUST00000035911 Q9D8Q6 235 aa4.41□□□□□ -1.7
Rc3h1-201ENSMUST00000035911 Tnrc18Q80WC3 2878 aa4.41□□□□□ -1.7
Rc3h1-201ENSMUST00000035911 C920008G01RikA0A0B4J1N1 112 aa4.41□□□□□ -1.7
Rc3h1-201ENSMUST00000035911 Gm17660B9UIU9 90 aa4.41□□□□□ -1.7
Rc3h1-201ENSMUST00000035911 Gm10135F6TEE5 83 aa4.41□□□□□ -1.7
Rc3h1-201ENSMUST00000035911 Gm20726G3UX18 150 aa4.41□□□□□ -1.7
Rc3h1-201ENSMUST00000035911 3110021N24RikJ3QMN2 152 aa4.41□□□□□ -1.7
Rc3h1-201ENSMUST00000035911 MalO09198 153 aa4.41□□□□□ -1.7
Rc3h1-201ENSMUST00000035911 P01811 117 aa4.41□□□□□ -1.7
Rc3h1-201ENSMUST00000035911 SmcpP15265 143 aa4.41□□□□□ -1.7
Rc3h1-201ENSMUST00000035911 Sumo2P61957 95 aaKnown RBP4.41□□□□□ -1.7
Rc3h1-201ENSMUST00000035911 Pglyrp4Q0VB07 374 aa4.41□□□□□ -1.7
Rc3h1-201ENSMUST00000035911 SrarpQ3ULG3 163 aa4.41□□□□□ -1.7
Rc3h1-201ENSMUST00000035911 Ndufa4Q62425 82 aaKnown RBP4.41□□□□□ -1.7
Rc3h1-201ENSMUST00000035911 Gm5105Q8C6Y9 112 aa4.41□□□□□ -1.7
Rc3h1-201ENSMUST00000035911 Gm9949Q8C9F4 104 aa4.41□□□□□ -1.7
Rc3h1-201ENSMUST00000035911 Cox6cQ9CPQ1 76 aa4.41□□□□□ -1.7
Rc3h1-201ENSMUST00000035911 Crip2Q9DCT8 208 aaKnown RBP4.41□□□□□ -1.7
Rc3h1-201ENSMUST00000035911 Dido1Q8C9B9 2256 aaKnown RBP4.4□□□□□ -1.7
Rc3h1-201ENSMUST00000035911 Trav7-6A0A075B640 112 aa4.4□□□□□ -1.7
Rc3h1-201ENSMUST00000035911 Rpl36-ps4A0A140T8U4 117 aa4.4□□□□□ -1.7
Rc3h1-201ENSMUST00000035911 CrygdP04342 174 aa4.4□□□□□ -1.7
Rc3h1-201ENSMUST00000035911 Ndufa4l2Q4FZG9 87 aa4.4□□□□□ -1.7
Rc3h1-201ENSMUST00000035911 Olfr313Q5NC55 308 aa4.4□□□□□ -1.7
Rc3h1-201ENSMUST00000035911 Morn5Q9DAI9 170 aa4.4□□□□□ -1.7
Rc3h1-201ENSMUST00000035911 BptfA2A654 3036 aaKnown RBP4.4□□□□□ -1.7
Rc3h1-201ENSMUST00000035911 Ighv1-23A0A0A6YVW3 117 aa4.4□□□□□ -1.71
Rc3h1-201ENSMUST00000035911 Cyyr1Q8VIH7 165 aa4.4□□□□□ -1.71
Rc3h1-201ENSMUST00000035911 Fancd2osQ9D4K4 178 aa4.4□□□□□ -1.71
Rc3h1-201ENSMUST00000035911 Ccl8Q9Z121 97 aa4.4□□□□□ -1.71
Rc3h1-201ENSMUST00000035911 Hcfc1Q61191 2045 aaKnown RBP4.4□□□□□ -1.71
Rc3h1-201ENSMUST00000035911 Trav7n-5A0A075B604 112 aa4.4□□□□□ -1.71
Rc3h1-201ENSMUST00000035911 Trav4d-3A0A075B625 110 aa4.4□□□□□ -1.71
Rc3h1-201ENSMUST00000035911 Igkv19-93A0A0G2JFZ3 115 aa4.4□□□□□ -1.71
Rc3h1-201ENSMUST00000035911 Edn2P22389 175 aa4.4□□□□□ -1.71
Rc3h1-201ENSMUST00000035911 Folr2Q05685 251 aa4.4□□□□□ -1.71
Rc3h1-201ENSMUST00000035911 Trbv17A0A140T8P8 114 aa4.39□□□□□ -1.71
Rc3h1-201ENSMUST00000035911 P04944 107 aa4.39□□□□□ -1.71
Rc3h1-201ENSMUST00000035911 AvpP35455 168 aa4.39□□□□□ -1.71
Rc3h1-201ENSMUST00000035911 Tmem30bQ8BHG3 353 aa4.39□□□□□ -1.71
Rc3h1-201ENSMUST00000035911 Gkn1Q9CR36 201 aa4.39□□□□□ -1.71
Rc3h1-201ENSMUST00000035911 NpwA0A1L1STR8 176 aa4.39□□□□□ -1.71
Rc3h1-201ENSMUST00000035911 CnfnQ6PCW6 111 aa4.39□□□□□ -1.71
Rc3h1-201ENSMUST00000035911 Higd1cQ76I25 96 aa4.39□□□□□ -1.71
Rc3h1-201ENSMUST00000035911 Mrpl16Q99N93 251 aa4.39□□□□□ -1.71
Rc3h1-201ENSMUST00000035911 Mrpl52Q9D0Y8 121 aa4.39□□□□□ -1.71
Rc3h1-201ENSMUST00000035911 Gm6793B2RXM2 351 aa4.38□□□□□ -1.71
Rc3h1-201ENSMUST00000035911 4930447F04RikA2AFR2 126 aa4.38□□□□□ -1.71
Rc3h1-201ENSMUST00000035911 BokO35425 213 aa4.38□□□□□ -1.71
Rc3h1-201ENSMUST00000035911 Sdhaf1Q3U276 118 aa4.38□□□□□ -1.71
Rc3h1-201ENSMUST00000035911 Gm16223Q8CBM3 117 aa4.38□□□□□ -1.71
Rc3h1-201ENSMUST00000035911 Nup37Q9CWU9 326 aa4.38□□□□□ -1.71
Rc3h1-201ENSMUST00000035911 Dmxl1Q6PNC0 3013 aa4.38□□□□□ -1.71
Rc3h1-201ENSMUST00000035911 Zcchc24B2RVL6 241 aaKnown RBP4.38□□□□□ -1.71
Rc3h1-201ENSMUST00000035911 Ins2P01326 110 aa4.38□□□□□ -1.71
Rc3h1-201ENSMUST00000035911 Ccl6P27784 116 aa4.38□□□□□ -1.71
Rc3h1-201ENSMUST00000035911 Gata4Q08369 441 aa4.38□□□□□ -1.71
Rc3h1-201ENSMUST00000035911 Tex26Q0VB26 296 aa4.38□□□□□ -1.71
Rc3h1-201ENSMUST00000035911 Tff3Q62395 81 aa4.38□□□□□ -1.71
Rc3h1-201ENSMUST00000035911 Cacna1gQ5SUF7 2381 aa4.38□□□□□ -1.71
Rc3h1-201ENSMUST00000035911 Bdp1Q571C7 2467 aa4.37□□□□□ -1.71
Rc3h1-201ENSMUST00000035911 1520401A03RikA0A0J9YVH6 598 aa4.37□□□□□ -1.71
Rc3h1-201ENSMUST00000035911 Srsf2Q62093 221 aaKnown RBP4.37□□□□□ -1.71
Rc3h1-201ENSMUST00000035911 Gatd1Q8BFQ8 220 aa4.37□□□□□ -1.71
Rc3h1-201ENSMUST00000035911 Ss18l1Q8BW22 402 aa4.37□□□□□ -1.71
Rc3h1-201ENSMUST00000035911 Ndufb3Q9CQZ6 104 aa4.37□□□□□ -1.71
Rc3h1-201ENSMUST00000035911 CstadQ9D245 104 aa4.37□□□□□ -1.71
Rc3h1-201ENSMUST00000035911 Celsr1O35161 3034 aa4.37□□□□□ -1.71
Rc3h1-201ENSMUST00000035911 Cacna1aP97445 2368 aa4.37□□□□□ -1.71
Rc3h1-201ENSMUST00000035911 FrylF8VQ05 3007 aa4.37□□□□□ -1.71
Rc3h1-201ENSMUST00000035911 Dopey2Q3UHQ6 2295 aa4.37□□□□□ -1.71
Rc3h1-201ENSMUST00000035911 VcanQ62059 3357 aa4.37□□□□□ -1.71
Rc3h1-201ENSMUST00000035911 Samd13D3YUG0 102 aa4.37□□□□□ -1.71
Rc3h1-201ENSMUST00000035911 Gm10036E9PYL9 178 aaKnown RBP4.37□□□□□ -1.71
Rc3h1-201ENSMUST00000035911 Gp9O88186 177 aa4.37□□□□□ -1.71
Rc3h1-201ENSMUST00000035911 Lect2O88803 151 aa4.37□□□□□ -1.71
Rc3h1-201ENSMUST00000035911 Mrpl36Q99N90 102 aa4.37□□□□□ -1.71
Rc3h1-201ENSMUST00000035911 Stpg1Q9D2F5 341 aa4.37□□□□□ -1.71
Rc3h1-201ENSMUST00000035911 Chd7A2AJK6 2986 aaKnown RBP4.37□□□□□ -1.71
Retrieved 100 of 22,080 RNA–protein pairs in 30.7 ms