RNA–Protein interactions for RNA: ENSMUST00000028280.13

Col5a1-201, Transcript of Collagen alpha-1(V) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col5a1, Length 8,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1-201ENSMUST00000028280 Tomm6Q9CQN3 74 aa11.23□□□□□ -0.61
Col5a1-201ENSMUST00000028280 Cd300eQ8K249 196 aa11.23□□□□□ -0.61
Col5a1-201ENSMUST00000028280 Ighv1-69A0A0G2JFS5 117 aa11.23□□□□□ -0.61
Col5a1-201ENSMUST00000028280 PifoQ9D9W1 207 aa11.23□□□□□ -0.61
Col5a1-201ENSMUST00000028280 Tet2Q4JK59 1912 aaKnown RBP11.23□□□□□ -0.61
Col5a1-201ENSMUST00000028280 Efna4O08542 206 aa11.22□□□□□ -0.61
Col5a1-201ENSMUST00000028280 Gata4Q08369 441 aa11.22□□□□□ -0.61
Col5a1-201ENSMUST00000028280 Tmem200bD3Z0P8 284 aa11.22□□□□□ -0.61
Col5a1-201ENSMUST00000028280 Rmi2Q3UPE3 149 aa11.22□□□□□ -0.61
Col5a1-201ENSMUST00000028280 Defb12Q8K4N3 78 aa11.22□□□□□ -0.61
Col5a1-201ENSMUST00000028280 Pygo1Q9D0P5 417 aa11.22□□□□□ -0.61
Col5a1-201ENSMUST00000028280 Egr2P08152 470 aa11.22□□□□□ -0.61
Col5a1-201ENSMUST00000028280 Olfr313Q5NC55 308 aa11.21□□□□□ -0.61
Col5a1-201ENSMUST00000028280 Dand5Q76LW6 185 aa11.21□□□□□ -0.61
Col5a1-201ENSMUST00000028280 Tm2d3Q8BJ83 261 aa11.21□□□□□ -0.61
Col5a1-201ENSMUST00000028280 Msrb3Q8BU85 253 aa11.21□□□□□ -0.61
Col5a1-201ENSMUST00000028280 Igkv8-26A0A075B5N5 123 aa11.21□□□□□ -0.61
Col5a1-201ENSMUST00000028280 Gm815Q3UWS2 115 aa11.21□□□□□ -0.61
Col5a1-201ENSMUST00000028280 Q91WE4 72 aa11.21□□□□□ -0.62
Col5a1-201ENSMUST00000028280 P03980 138 aa11.21□□□□□ -0.62
Col5a1-201ENSMUST00000028280 Trav14-3A0A075B607 120 aa11.2□□□□□ -0.62
Col5a1-201ENSMUST00000028280 A930003A15RikQ3U552 87 aa11.2□□□□□ -0.62
Col5a1-201ENSMUST00000028280 9930022D16RikQ8BG27 128 aa11.2□□□□□ -0.62
Col5a1-201ENSMUST00000028280 4930415O20RikQ8CDT5 131 aa11.2□□□□□ -0.62
Col5a1-201ENSMUST00000028280 MifP34884 115 aaKnown RBP11.2□□□□□ -0.62
Col5a1-201ENSMUST00000028280 1700074P13RikQ9D9G7 251 aa11.2□□□□□ -0.62
Col5a1-201ENSMUST00000028280 Gm20878L7N244 103 aa11.2□□□□□ -0.62
Col5a1-201ENSMUST00000028280 Slc25a48Q8BW66 306 aa11.2□□□□□ -0.62
Col5a1-201ENSMUST00000028280 Igkv1-122A0A140T8M9 119 aa11.2□□□□□ -0.62
Col5a1-201ENSMUST00000028280 P01655 112 aa11.2□□□□□ -0.62
Col5a1-201ENSMUST00000028280 Ube2bP63147 152 aa11.2□□□□□ -0.62
Col5a1-201ENSMUST00000028280 PtprqP0C5E4 2300 aa11.2□□□□□ -0.62
Col5a1-201ENSMUST00000028280 Ccl3P10855 92 aa11.2□□□□□ -0.62
Col5a1-201ENSMUST00000028280 Tcl1b2P56841 117 aa11.2□□□□□ -0.62
Col5a1-201ENSMUST00000028280 EpopQ7TNS8 369 aa11.2□□□□□ -0.62
Col5a1-201ENSMUST00000028280 Ighv1-39A0A075B5V5 117 aa11.19□□□□□ -0.62
Col5a1-201ENSMUST00000028280 Ighv6-7A0A0A6YWU3 119 aa11.19□□□□□ -0.62
Col5a1-201ENSMUST00000028280 Defb47Q30KN1 79 aa11.19□□□□□ -0.62
Col5a1-201ENSMUST00000028280 RtbdnQ8QZY4 247 aa11.19□□□□□ -0.62
Col5a1-201ENSMUST00000028280 Ndufa1O35683 70 aa11.19□□□□□ -0.62
Col5a1-201ENSMUST00000028280 Fam222aQ6PGH4 453 aa11.19□□□□□ -0.62
Col5a1-201ENSMUST00000028280 Pmaip1Q9JM54 103 aa11.19□□□□□ -0.62
Col5a1-201ENSMUST00000028280 Ighv1-16A0A075B5U1 98 aa11.19□□□□□ -0.62
Col5a1-201ENSMUST00000028280 Ighv8-4A0A0A6YW26 117 aa11.19□□□□□ -0.62
Col5a1-201ENSMUST00000028280 Igkv2-137A0A0B4J1H6 120 aa11.19□□□□□ -0.62
Col5a1-201ENSMUST00000028280 Wdr86D3Z757 380 aa11.19□□□□□ -0.62
Col5a1-201ENSMUST00000028280 Gm17455G3UW87 128 aa11.19□□□□□ -0.62
Col5a1-201ENSMUST00000028280 P0C1Z5 52 aa11.18□□□□□ -0.62
Col5a1-201ENSMUST00000028280 Slc25a47Q6IS41 310 aa11.18□□□□□ -0.62
Col5a1-201ENSMUST00000028280 Foxf1Q61080 378 aa11.18□□□□□ -0.62
Col5a1-201ENSMUST00000028280 Foxc1Q61572 553 aa11.18□□□□□ -0.62
Col5a1-201ENSMUST00000028280 BC035044E0CXF8 138 aa11.18□□□□□ -0.62
Col5a1-201ENSMUST00000028280 Ighv8-2A0A0A6YW58 119 aa11.18□□□□□ -0.62
Col5a1-201ENSMUST00000028280 Cox6a1P43024 111 aa11.18□□□□□ -0.62
Col5a1-201ENSMUST00000028280 Atp5eP56382 52 aa11.18□□□□□ -0.62
Col5a1-201ENSMUST00000028280 Ifitm1Q9D103 106 aa11.18□□□□□ -0.62
Col5a1-201ENSMUST00000028280 Lyrm9Q3UN90 78 aa11.17□□□□□ -0.62
Col5a1-201ENSMUST00000028280 Fam241bQ9D882 120 aa11.17□□□□□ -0.62
Col5a1-201ENSMUST00000028280 Smim20D3Z7Q2 69 aa11.17□□□□□ -0.62
Col5a1-201ENSMUST00000028280 Slc25a29Q8BL03 306 aa11.17□□□□□ -0.62
Col5a1-201ENSMUST00000028280 P01837 106 aa11.17□□□□□ -0.62
Col5a1-201ENSMUST00000028280 Pygo2Q80V76 405 aa11.17□□□□□ -0.62
Col5a1-201ENSMUST00000028280 OtosQ8R448 89 aa11.17□□□□□ -0.62
Col5a1-201ENSMUST00000028280 ArtnQ9Z0L2 224 aa11.17□□□□□ -0.62
Col5a1-201ENSMUST00000028280 DscamQ9ERC8 2013 aa11.17□□□□□ -0.62
Col5a1-201ENSMUST00000028280 BC048562Q80ZQ7 204 aa11.17□□□□□ -0.62
Col5a1-201ENSMUST00000028280 3110021N24RikJ3QMN2 152 aa11.17□□□□□ -0.62
Col5a1-201ENSMUST00000028280 NpsP0C0P8 89 aa11.17□□□□□ -0.62
Col5a1-201ENSMUST00000028280 Gm20730A0A075B5J6 119 aa11.17□□□□□ -0.62
Col5a1-201ENSMUST00000028280 Ang2Q64438 145 aa11.17□□□□□ -0.62
Col5a1-201ENSMUST00000028280 Gm10251J3QPM5 127 aa11.16□□□□□ -0.62
Col5a1-201ENSMUST00000028280 Gm2916Q9D9B9 127 aa11.16□□□□□ -0.62
Col5a1-201ENSMUST00000028280 Sox16Q62247 57 aa11.16□□□□□ -0.62
Col5a1-201ENSMUST00000028280 Wfdc2Q9DAU7 174 aa11.16□□□□□ -0.62
Col5a1-201ENSMUST00000028280 Fxyd1Q9Z239 92 aa11.16□□□□□ -0.62
Col5a1-201ENSMUST00000028280 Ypel3P61237 119 aa11.16□□□□□ -0.62
Col5a1-201ENSMUST00000028280 AcacbE9Q4Z2 2448 aa11.16□□□□□ -0.62
Col5a1-201ENSMUST00000028280 Gm7257D3YX25 99 aa11.16□□□□□ -0.62
Col5a1-201ENSMUST00000028280 COA4Q8BT51 87 aa11.16□□□□□ -0.62
Col5a1-201ENSMUST00000028280 Rhno1Q8K3A4 235 aa11.15□□□□□ -0.62
Col5a1-201ENSMUST00000028280 4930447F04RikA2AFR2 126 aa11.15□□□□□ -0.62
Col5a1-201ENSMUST00000028280 Lst1O08843 95 aa11.15□□□□□ -0.62
Col5a1-201ENSMUST00000028280 Svs5P30933 122 aa11.15□□□□□ -0.62
Col5a1-201ENSMUST00000028280 Ndufs5Q99LY9 106 aa11.15□□□□□ -0.62
Col5a1-201ENSMUST00000028280 Tmem263Q9DAM7 115 aa11.15□□□□□ -0.62
Col5a1-201ENSMUST00000028280 Notch4P31695 1964 aa11.15□□□□□ -0.62
Col5a1-201ENSMUST00000028280 Atp6v0e1Q9CQD8 81 aa11.15□□□□□ -0.62
Col5a1-201ENSMUST00000028280 Trav6n-6A0A075B6B2 114 aa11.15□□□□□ -0.63
Col5a1-201ENSMUST00000028280 P01660 111 aa11.15□□□□□ -0.63
Col5a1-201ENSMUST00000028280 Znrf2Q71FD5 238 aa11.15□□□□□ -0.63
Col5a1-201ENSMUST00000028280 Atp23Q9CWQ3 201 aa11.15□□□□□ -0.63
Col5a1-201ENSMUST00000028280 A0A1Y7VLU2 103 aa11.14□□□□□ -0.63
Col5a1-201ENSMUST00000028280 Tax1bp3Q9DBG9 124 aa11.14□□□□□ -0.63
Col5a1-201ENSMUST00000028280 Synj2bpQ9D6K5 145 aa11.14□□□□□ -0.63
Col5a1-201ENSMUST00000028280 Lypd8Q9D7S0 255 aa11.14□□□□□ -0.63
Col5a1-201ENSMUST00000028280 Ang4Q3TMQ6 144 aa11.14□□□□□ -0.63
Col5a1-201ENSMUST00000028280 PemtQ61907 199 aa11.14□□□□□ -0.63
Col5a1-201ENSMUST00000028280 SprnQ8BWU1 147 aa11.14□□□□□ -0.63
Col5a1-201ENSMUST00000028280 P01794 123 aa11.13□□□□□ -0.63
Col5a1-201ENSMUST00000028280 H2al1aQ5M8Q2 105 aa11.13□□□□□ -0.63
Retrieved 100 of 22,080 RNA–protein pairs in 87.7 ms