RNA–Protein interactions for RNA: ENSMUST00000027988.7

Ccdc3-201, Transcript of Coiled-coil domain-containing protein 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc3, Length 2,670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3-201ENSMUST00000027988 Ighv1-80A0A075B5Y3 117 aa13.94□□□□□ -0.18
Ccdc3-201ENSMUST00000027988 Bsph2Q0Q236 131 aa13.94□□□□□ -0.18
Ccdc3-201ENSMUST00000027988 Abca2P41234 2434 aa13.94□□□□□ -0.18
Ccdc3-201ENSMUST00000027988 Arl3Q9WUL7 182 aa13.94□□□□□ -0.18
Ccdc3-201ENSMUST00000027988 Gm10521E9PZK0 135 aa13.93□□□□□ -0.18
Ccdc3-201ENSMUST00000027988 Mtatp8P03930 67 aa13.93□□□□□ -0.18
Ccdc3-201ENSMUST00000027988 PspnO70300 156 aa13.93□□□□□ -0.18
Ccdc3-201ENSMUST00000027988 Gm17334Q8C6U3 126 aa13.93□□□□□ -0.18
Ccdc3-201ENSMUST00000027988 Ighv1-9A0A0A6YW37 117 aa13.92□□□□□ -0.18
Ccdc3-201ENSMUST00000027988 Ighv1-82A0A0G2JEU7 117 aa13.92□□□□□ -0.18
Ccdc3-201ENSMUST00000027988 Igsf23B2RTN2 239 aa13.92□□□□□ -0.18
Ccdc3-201ENSMUST00000027988 Prss41Q920S2 322 aa13.92□□□□□ -0.18
Ccdc3-201ENSMUST00000027988 Obox1Q9D350 204 aa13.92□□□□□ -0.18
Ccdc3-201ENSMUST00000027988 AcacbE9Q4Z2 2448 aa13.92□□□□□ -0.18
Ccdc3-201ENSMUST00000027988 Utp20Q5XG71 2788 aaKnown RBP13.92□□□□□ -0.18
Ccdc3-201ENSMUST00000027988 Gm29289A0A087WPY7 166 aa13.92□□□□□ -0.18
Ccdc3-201ENSMUST00000027988 Gm4064A0A087WR82 380 aa13.92□□□□□ -0.18
Ccdc3-201ENSMUST00000027988 Gm10352B2RWR6 380 aa13.92□□□□□ -0.18
Ccdc3-201ENSMUST00000027988 Gm21693J3QK27 380 aa13.92□□□□□ -0.18
Ccdc3-201ENSMUST00000027988 Rbmy1a1O35698 380 aa13.92□□□□□ -0.18
Ccdc3-201ENSMUST00000027988 P18527 97 aa13.92□□□□□ -0.18
Ccdc3-201ENSMUST00000027988 BlcapP62951 87 aa13.92□□□□□ -0.18
Ccdc3-201ENSMUST00000027988 8030423J24RikQ9CX45 142 aa13.92□□□□□ -0.18
Ccdc3-201ENSMUST00000027988 RhohQ9D3G9 191 aa13.92□□□□□ -0.18
Ccdc3-201ENSMUST00000027988 Ighv3-8A0A075B5T0 131 aa13.91□□□□□ -0.18
Ccdc3-201ENSMUST00000027988 P01747 120 aa13.91□□□□□ -0.18
Ccdc3-201ENSMUST00000027988 Mob4Q6PEB6 225 aa13.91□□□□□ -0.18
Ccdc3-201ENSMUST00000027988 Dpm3Q9D1Q4 92 aa13.91□□□□□ -0.18
Ccdc3-201ENSMUST00000027988 Erg28Q9ERY9 140 aa13.91□□□□□ -0.18
Ccdc3-201ENSMUST00000027988 Cxcl14Q9WUQ5 99 aa13.91□□□□□ -0.18
Ccdc3-201ENSMUST00000027988 OtogO55225 2910 aa13.91□□□□□ -0.18
Ccdc3-201ENSMUST00000027988 4930447F04RikA2AFR2 126 aa13.9□□□□□ -0.18
Ccdc3-201ENSMUST00000027988 Dppa2Q9CWH0 301 aa13.9□□□□□ -0.18
Ccdc3-201ENSMUST00000027988 Spink12Q9D256 87 aa13.9□□□□□ -0.18
Ccdc3-201ENSMUST00000027988 Ep300B2RWS6 2412 aa13.9□□□□□ -0.18
Ccdc3-201ENSMUST00000027988 Ankhd1E9PUR0 2548 aaKnown RBP13.9□□□□□ -0.18
Ccdc3-201ENSMUST00000027988 NrgnP60761 78 aa13.9□□□□□ -0.18
Ccdc3-201ENSMUST00000027988 Prr3Q811B5 190 aaKnown RBP13.9□□□□□ -0.18
Ccdc3-201ENSMUST00000027988 Cnn3Q9DAW9 330 aaKnown RBP13.9□□□□□ -0.18
Ccdc3-201ENSMUST00000027988 Ighv1-22A0A075B5U7 117 aa13.89□□□□□ -0.19
Ccdc3-201ENSMUST00000027988 Hist1h1tQ07133 208 aa13.89□□□□□ -0.19
Ccdc3-201ENSMUST00000027988 TdhQ8K3F7 373 aa13.89□□□□□ -0.19
Ccdc3-201ENSMUST00000027988 Mrpl36Q99N90 102 aa13.89□□□□□ -0.19
Ccdc3-201ENSMUST00000027988 Nit2Q9JHW2 276 aa13.89□□□□□ -0.19
Ccdc3-201ENSMUST00000027988 Rpl11Q9CXW4 178 aaKnown RBP13.89□□□□□ -0.19
Ccdc3-201ENSMUST00000027988 Mettl26Q9DCS2 204 aa13.89□□□□□ -0.19
Ccdc3-201ENSMUST00000027988 Celsr2Q9R0M0 2920 aa13.89□□□□□ -0.19
Ccdc3-201ENSMUST00000027988 MsmbO08540 113 aa13.88□□□□□ -0.19
Ccdc3-201ENSMUST00000027988 Psmg4P0C7N9 123 aa13.88□□□□□ -0.19
Ccdc3-201ENSMUST00000027988 Tex26Q0VB26 296 aa13.88□□□□□ -0.19
Ccdc3-201ENSMUST00000027988 Tctex1d4Q8CDY7 219 aa13.88□□□□□ -0.19
Ccdc3-201ENSMUST00000027988 Trbv13-1A0A0B4J1P8 112 aa13.88□□□□□ -0.19
Ccdc3-201ENSMUST00000027988 Tcte2E9PY37 120 aa13.88□□□□□ -0.19
Ccdc3-201ENSMUST00000027988 Casp6O08738 276 aa13.88□□□□□ -0.19
Ccdc3-201ENSMUST00000027988 Ube2tQ9CQ37 204 aa13.88□□□□□ -0.19
Ccdc3-201ENSMUST00000027988 Kmt2bO08550 2713 aa13.88□□□□□ -0.19
Ccdc3-201ENSMUST00000027988 SbpP15501 199 aa13.87□□□□□ -0.19
Ccdc3-201ENSMUST00000027988 Chd8Q09XV5 2582 aaKnown RBP13.87□□□□□ -0.19
Ccdc3-201ENSMUST00000027988 P01739 132 aa13.87□□□□□ -0.19
Ccdc3-201ENSMUST00000027988 S100a4P07091 101 aa13.87□□□□□ -0.19
Ccdc3-201ENSMUST00000027988 Rasl11bQ922H7 247 aa13.87□□□□□ -0.19
Ccdc3-201ENSMUST00000027988 Q9DAB9 146 aa13.87□□□□□ -0.19
Ccdc3-201ENSMUST00000027988 Sorl1O88307 2215 aaKnown RBP13.87□□□□□ -0.19
Ccdc3-201ENSMUST00000027988 Gm26602M0QWA4 95 aa13.87□□□□□ -0.19
Ccdc3-201ENSMUST00000027988 Ndufa1O35683 70 aa13.87□□□□□ -0.19
Ccdc3-201ENSMUST00000027988 Ins2P01326 110 aa13.87□□□□□ -0.19
Ccdc3-201ENSMUST00000027988 Pxt1Q8K459 51 aa13.87□□□□□ -0.19
Ccdc3-201ENSMUST00000027988 Spcs1Q9D958 161 aa13.87□□□□□ -0.19
Ccdc3-201ENSMUST00000027988 FlncQ8VHX6 2726 aaKnown RBP13.86□□□□□ -0.19
Ccdc3-201ENSMUST00000027988 H2al2bA9Z055 111 aa13.86□□□□□ -0.19
Ccdc3-201ENSMUST00000027988 Mrps12O35680 139 aa13.86□□□□□ -0.19
Ccdc3-201ENSMUST00000027988 Olfr312Q7TRZ9 308 aa13.86□□□□□ -0.19
Ccdc3-201ENSMUST00000027988 Hif1anQ8BLR9 349 aa13.86□□□□□ -0.19
Ccdc3-201ENSMUST00000027988 Odf3Q920N1 254 aa13.86□□□□□ -0.19
Ccdc3-201ENSMUST00000027988 Defa34D3Z0J0 93 aa13.85□□□□□ -0.19
Ccdc3-201ENSMUST00000027988 Tmem97Q8VD00 176 aa13.85□□□□□ -0.19
Ccdc3-201ENSMUST00000027988 Adrb3P25962 400 aa13.85□□□□□ -0.19
Ccdc3-201ENSMUST00000027988 Shisa9Q9CZN4 424 aa13.85□□□□□ -0.19
Ccdc3-201ENSMUST00000027988 SNORCQ9CXL7 121 aa13.84□□□□□ -0.19
Ccdc3-201ENSMUST00000027988 NbasE9Q411 2356 aa13.84□□□□□ -0.19
Ccdc3-201ENSMUST00000027988 Tmem238lA0A1B0GS74 79 aa13.84□□□□□ -0.19
Ccdc3-201ENSMUST00000027988 P06334 169 aa13.84□□□□□ -0.19
Ccdc3-201ENSMUST00000027988 Gata3P23772 443 aa13.84□□□□□ -0.19
Ccdc3-201ENSMUST00000027988 Srsf1Q6PDM2 248 aaKnown RBP13.84□□□□□ -0.19
Ccdc3-201ENSMUST00000027988 Igkv4-74A0A0B4J1I3 119 aa13.83□□□□□ -0.2
Ccdc3-201ENSMUST00000027988 Brd3osA0A1B0GRB6 84 aa13.83□□□□□ -0.2
Ccdc3-201ENSMUST00000027988 Sumo2P61957 95 aaKnown RBP13.83□□□□□ -0.2
Ccdc3-201ENSMUST00000027988 Samd10Q7TST3 202 aa13.83□□□□□ -0.2
Ccdc3-201ENSMUST00000027988 Tmem14cQ9CQN6 114 aa13.83□□□□□ -0.2
Ccdc3-201ENSMUST00000027988 Trav8-1A0A075B641 109 aa13.83□□□□□ -0.2
Ccdc3-201ENSMUST00000027988 Pip4p1Q3TWL2 284 aa13.83□□□□□ -0.2
Ccdc3-201ENSMUST00000027988 Htr1dQ61224 374 aa13.83□□□□□ -0.2
Ccdc3-201ENSMUST00000027988 Gpr82Q8BZR0 328 aa13.83□□□□□ -0.2
Ccdc3-201ENSMUST00000027988 MdfiP70331 251 aa13.82□□□□□ -0.2
Ccdc3-201ENSMUST00000027988 Gm94Q3V2D2 93 aa13.82□□□□□ -0.2
Ccdc3-201ENSMUST00000027988 Ndufa4Q62425 82 aaKnown RBP13.82□□□□□ -0.2
Ccdc3-201ENSMUST00000027988 Esp3J3QN49 87 aa13.82□□□□□ -0.2
Ccdc3-201ENSMUST00000027988 Bak1O08734 209 aa13.82□□□□□ -0.2
Ccdc3-201ENSMUST00000027988 LhbO09108 141 aa13.82□□□□□ -0.2
Ccdc3-201ENSMUST00000027988 P01643 108 aa13.82□□□□□ -0.2
Retrieved 100 of 22,080 RNA–protein pairs in 14.2 ms