RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-231ENST00000641939 MT1MQ8N339 61 aa5.32□□□□□ -1.56
PHGDH-231ENST00000641939 PSPHP1O15172 72 aa5.29□□□□□ -1.56
PHGDH-231ENST00000641939 Q1T7F1 81 aa5.29□□□□□ -1.56
PHGDH-231ENST00000641939 GPR98Q8WXG9 6306 aa5.27□□□□□ -1.57
PHGDH-231ENST00000641939 K7ERS5 55 aa5.26□□□□□ -1.57
PHGDH-231ENST00000641939 KRTAP4-9Q9BYQ8 210 aa5.24□□□□□ -1.57
PHGDH-231ENST00000641939 KRTAP12-3P60328 96 aa5.23□□□□□ -1.57
PHGDH-231ENST00000641939 KRTAP25-1Q3LHN0 102 aa5.21□□□□□ -1.58
PHGDH-231ENST00000641939 KRTAP4-3Q9BYR4 195 aa5.18□□□□□ -1.58
PHGDH-231ENST00000641939 A6NED7 52 aa5.12□□□□□ -1.59
PHGDH-231ENST00000641939 LCE4AQ5TA78 99 aa5.12□□□□□ -1.59
PHGDH-231ENST00000641939 LCE1DQ5T752 114 aa5.1□□□□□ -1.59
PHGDH-231ENST00000641939 KRTAP4-7Q9BYR0 210 aa5.08□□□□□ -1.6
PHGDH-231ENST00000641939 RPS28P62857 69 aaKnown RBP5.05□□□□□ -1.6
PHGDH-231ENST00000641939 MT4P47944 62 aa5.04□□□□□ -1.6
PHGDH-231ENST00000641939 KRTAP5-4Q6L8H1 288 aa5.03□□□□□ -1.6
PHGDH-231ENST00000641939 HMCN1Q96RW7 5635 aa5.03□□□□□ -1.6
PHGDH-231ENST00000641939 KRTAP23-1A1A580 65 aa5.02□□□□□ -1.61
PHGDH-231ENST00000641939 PCP4P48539 62 aa5.01□□□□□ -1.61
PHGDH-231ENST00000641939 CDC42SE1Q9NRR8 79 aa4.98□□□□□ -1.61
PHGDH-231ENST00000641939 KRTAP19-4Q3LI73 84 aa4.95□□□□□ -1.62
PHGDH-231ENST00000641939 KRTAP15-1Q3LI76 137 aa4.91□□□□□ -1.62
PHGDH-231ENST00000641939 KRTAP4-6Q9BYQ5 205 aa4.91□□□□□ -1.62
PHGDH-231ENST00000641939 ROMO1P60602 79 aa4.9□□□□□ -1.63
PHGDH-231ENST00000641939 AHNAK2Q8IVF2 5795 aa4.87□□□□□ -1.63
PHGDH-231ENST00000641939 KRTAP5-5Q701N2 237 aaPredicted RBP4.87□□□□□ -1.63
PHGDH-231ENST00000641939 KRTAP5-10Q6L8G5 202 aa4.84□□□□□ -1.63
PHGDH-231ENST00000641939 LOC100996750A0A140TA64 210 aa4.82□□□□□ -1.64
PHGDH-231ENST00000641939 LCE3CQ5T5A8 94 aa4.82□□□□□ -1.64
PHGDH-231ENST00000641939 KRTAP20-2Q3LI61 65 aa4.75□□□□□ -1.65
PHGDH-231ENST00000641939 SPRR5A0A1B0GTR4 108 aa4.74□□□□□ -1.65
PHGDH-231ENST00000641939 KRTAP12-4P60329 112 aa4.74□□□□□ -1.65
PHGDH-231ENST00000641939 SYNE1Q8NF91 8797 aaKnown RBP4.7□□□□□ -1.66
PHGDH-231ENST00000641939 KRTAP5-7Q6L8G8 165 aa4.69□□□□□ -1.66
PHGDH-231ENST00000641939 KRTAP5-3Q6L8H2 238 aa4.68□□□□□ -1.66
PHGDH-231ENST00000641939 MT1AP04731 61 aa4.56□□□□□ -1.68
PHGDH-231ENST00000641939 KRTAP9-6A8MVA2 160 aa4.54□□□□□ -1.68
PHGDH-231ENST00000641939 KRTAP6-1Q3LI64 71 aa4.52□□□□□ -1.69
PHGDH-231ENST00000641939 BRK1Q8WUW1 75 aa4.44□□□□□ -1.7
PHGDH-231ENST00000641939 KRTAP5-2Q701N4 177 aa4.43□□□□□ -1.7
PHGDH-231ENST00000641939 KRTAP9-4Q9BYQ2 154 aa4.4□□□□□ -1.71
PHGDH-231ENST00000641939 KRTAP6-2Q3LI66 62 aa4.32□□□□□ -1.72
PHGDH-231ENST00000641939 KRTAP4-11Q9BYQ6 195 aa4.32□□□□□ -1.72
PHGDH-231ENST00000641939 KRTAP5-8O75690 187 aa4.17□□□□□ -1.74
PHGDH-231ENST00000641939 MT3P25713 68 aa4.17□□□□□ -1.74
PHGDH-231ENST00000641939 PMAIP1Q13794 54 aa4.17□□□□□ -1.74
PHGDH-231ENST00000641939 OBSCNQ5VST9 7968 aa4.12□□□□□ -1.75
PHGDH-231ENST00000641939 MUC5ACP98088 5654 aa4.05□□□□□ -1.76
PHGDH-231ENST00000641939 AHNAKQ09666 5890 aaKnown RBP4.03□□□□□ -1.76
PHGDH-231ENST00000641939 MUC5BQ9HC84 5762 aaPredicted RBP4.02□□□□□ -1.77
PHGDH-231ENST00000641939 PRAC1Q96KF2 57 aa4.01□□□□□ -1.77
PHGDH-231ENST00000641939 KRTAP9-9Q9BYP9 154 aa3.98□□□□□ -1.77
PHGDH-231ENST00000641939 KRTAP5-1Q6L8H4 278 aa3.95□□□□□ -1.78
PHGDH-231ENST00000641939 PRO0628Q9UI54 55 aa3.89□□□□□ -1.79
PHGDH-231ENST00000641939 LCE1EQ5T753 118 aa3.82□□□□□ -1.8
PHGDH-231ENST00000641939 KTN1-AS1Q86SY8 53 aa3.71□□□□□ -1.82
PHGDH-231ENST00000641939 KRTAP4-2Q9BYR5 136 aa3.59□□□□□ -1.83
PHGDH-231ENST00000641939 LCE1BQ5T7P3 118 aa3.58□□□□□ -1.84
PHGDH-231ENST00000641939 SVIPQ8NHG7 77 aa3.56□□□□□ -1.84
PHGDH-231ENST00000641939 LCE1CQ5T751 118 aa3.54□□□□□ -1.84
PHGDH-231ENST00000641939 LCE3DQ9BYE3 92 aa3.49□□□□□ -1.85
PHGDH-231ENST00000641939 LUZP6Q538Z0 58 aa3.4□□□□□ -1.87
PHGDH-231ENST00000641939 LCE3EQ5T5B0 92 aa3.29□□□□□ -1.88
PHGDH-231ENST00000641939 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.23□□□□□ -1.89
PHGDH-231ENST00000641939 KRTAP4-12Q9BQ66 201 aa3.23□□□□□ -1.89
PHGDH-231ENST00000641939 KRTAP5-11Q6L8G4 156 aa3.2□□□□□ -1.9
PHGDH-231ENST00000641939 LCE1FQ5T754 118 aa3.11□□□□□ -1.91
PHGDH-231ENST00000641939 KRTAP21-2Q3LI59 83 aa2.99□□□□□ -1.93
PHGDH-231ENST00000641939 PHGR1C9JFL3 82 aa2.84□□□□□ -1.95
PHGDH-231ENST00000641939 NDUFAF8A1L188 74 aa2.73□□□□□ -1.97
PHGDH-231ENST00000641939 KRTAP4-4Q9BYR3 166 aa2.72□□□□□ -1.97
PHGDH-231ENST00000641939 H3BS24 57 aa2.57□□□□□ -2
PHGDH-231ENST00000641939 MUC19Q7Z5P9 8384 aa2.55□□□□□ -2
PHGDH-231ENST00000641939 PRM1P04553 51 aa2.5□□□□□ -2.01
PHGDH-231ENST00000641939 INE1O15225 51 aa2.19□□□□□ -2.06
PHGDH-231ENST00000641939 A0A0A0MQY5 61 aa2.18□□□□□ -2.06
PHGDH-231ENST00000641939 KRTAP21-1Q3LI58 79 aa2.16□□□□□ -2.06
PHGDH-231ENST00000641939 MUC16Q8WXI7 14507 aa1.85□□□□□ -2.11
Retrieved 78 of 20,778 RNA–protein pairs in 158.1 ms