RNA–Protein interactions for RNA: ENST00000641411.1

CASC19-227, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 1,285 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-227ENST00000641411 LCE1BQ5T7P3 118 aa3.4□□□□□ -1.87
CASC19-227ENST00000641411 KRTAP5-8O75690 187 aa3.39□□□□□ -1.87
CASC19-227ENST00000641411 LINC01554Q52M75 96 aa3.39□□□□□ -1.87
CASC19-227ENST00000641411 SPRR2GQ9BYE4 73 aa3.37□□□□□ -1.87
CASC19-227ENST00000641411 M0R2T5 61 aa3.34□□□□□ -1.87
CASC19-227ENST00000641411 MT2AP02795 61 aa3.31□□□□□ -1.88
CASC19-227ENST00000641411 CAMK2N1Q7Z7J9 78 aa3.3□□□□□ -1.88
CASC19-227ENST00000641411 C10orf95Q9H7T3 257 aa3.3□□□□□ -1.88
CASC19-227ENST00000641411 MT1FP04733 61 aa3.28□□□□□ -1.88
CASC19-227ENST00000641411 MUC2Q02817 5179 aa3.27□□□□□ -1.89
CASC19-227ENST00000641411 KRTAP10-10P60014 251 aa3.27□□□□□ -1.89
CASC19-227ENST00000641411 KRTAP19-8Q3LI54 63 aa3.27□□□□□ -1.89
CASC19-227ENST00000641411 PP632Q6XCG6 107 aa3.26□□□□□ -1.89
CASC19-227ENST00000641411 PLAC4Q8WY50 150 aa3.26□□□□□ -1.89
CASC19-227ENST00000641411 RNF213Q63HN8 5207 aa3.25□□□□□ -1.89
CASC19-227ENST00000641411 TNP1P09430 55 aa3.2□□□□□ -1.9
CASC19-227ENST00000641411 FAT4Q6V0I7 4981 aa3.17□□□□□ -1.9
CASC19-227ENST00000641411 MT1BP07438 61 aa3.17□□□□□ -1.9
CASC19-227ENST00000641411 MT1XP80297 61 aa3.1□□□□□ -1.91
CASC19-227ENST00000641411 PRO2289Q9P1D8 64 aa3.08□□□□□ -1.92
CASC19-227ENST00000641411 KRTAP8-1Q8IUC2 63 aa3.01□□□□□ -1.93
CASC19-227ENST00000641411 SPRR5A0A1B0GTR4 108 aa2.94□□□□□ -1.94
CASC19-227ENST00000641411 MUC19Q7Z5P9 8384 aa2.92□□□□□ -1.94
CASC19-227ENST00000641411 FSIP2Q5CZC0 6907 aa2.91□□□□□ -1.94
CASC19-227ENST00000641411 KRTAP12-3P60328 96 aa2.9□□□□□ -1.95
CASC19-227ENST00000641411 LCE3DQ9BYE3 92 aa2.9□□□□□ -1.95
CASC19-227ENST00000641411 KRTAP19-6Q3LI70 58 aa2.89□□□□□ -1.95
CASC19-227ENST00000641411 LUZP6Q538Z0 58 aa2.87□□□□□ -1.95
CASC19-227ENST00000641411 CRCT1Q9UGL9 99 aa2.85□□□□□ -1.95
CASC19-227ENST00000641411 KRTAP19-5Q3LI72 72 aa2.81□□□□□ -1.96
CASC19-227ENST00000641411 KRTAP5-7Q6L8G8 165 aa2.81□□□□□ -1.96
CASC19-227ENST00000641411 USH2AO75445 5202 aa2.77□□□□□ -1.97
CASC19-227ENST00000641411 KRTAP19-7Q3SYF9 63 aa2.76□□□□□ -1.97
CASC19-227ENST00000641411 SSPOA2VEC9 5147 aa2.74□□□□□ -1.97
CASC19-227ENST00000641411 MT1EP04732 61 aa2.71□□□□□ -1.98
CASC19-227ENST00000641411 MT1LQ93083 61 aa2.68□□□□□ -1.98
CASC19-227ENST00000641411 GPR98Q8WXG9 6306 aa2.59□□□□□ -1.99
CASC19-227ENST00000641411 MT1GP13640 62 aa2.59□□□□□ -1.99
CASC19-227ENST00000641411 KRTAP19-3Q7Z4W3 81 aa2.58□□□□□ -2
CASC19-227ENST00000641411 NEBP20929 6669 aa2.58□□□□□ -2
CASC19-227ENST00000641411 FCGBPQ9Y6R7 5405 aaPredicted RBP2.56□□□□□ -2
CASC19-227ENST00000641411 SYNE2Q8WXH0 6885 aaKnown RBP2.54□□□□□ -2
CASC19-227ENST00000641411 MT1MQ8N339 61 aa2.54□□□□□ -2
CASC19-227ENST00000641411 KMT2DO14686 5537 aa2.54□□□□□ -2
CASC19-227ENST00000641411 SPRR2FQ96RM1 72 aa2.51□□□□□ -2.01
CASC19-227ENST00000641411 KRTAP2-3P0C7H8 128 aa2.49□□□□□ -2.01
CASC19-227ENST00000641411 KRTAP2-4Q9BYR9 128 aa2.49□□□□□ -2.01
CASC19-227ENST00000641411 KRTAP2-1Q9BYU5 128 aa2.49□□□□□ -2.01
CASC19-227ENST00000641411 INE1O15225 51 aa2.46□□□□□ -2.02
CASC19-227ENST00000641411 KRTAP21-2Q3LI59 83 aa2.46□□□□□ -2.02
CASC19-227ENST00000641411 KRTAP20-1Q3LI63 56 aa2.45□□□□□ -2.02
CASC19-227ENST00000641411 HMCN1Q96RW7 5635 aa2.43□□□□□ -2.02
CASC19-227ENST00000641411 MACF1Q9UPN3 7388 aaKnown RBP2.42□□□□□ -2.02
CASC19-227ENST00000641411 KRTAP6-3Q3LI67 103 aa2.39□□□□□ -2.03
CASC19-227ENST00000641411 SPRR2EP22531 72 aa2.35□□□□□ -2.03
CASC19-227ENST00000641411 SPRR2BP35325 72 aa2.35□□□□□ -2.03
CASC19-227ENST00000641411 SPRR2AP35326 72 aa2.35□□□□□ -2.03
CASC19-227ENST00000641411 MUC12Q9UKN1 5478 aa2.33□□□□□ -2.04
CASC19-227ENST00000641411 MT1AP04731 61 aa2.3□□□□□ -2.04
CASC19-227ENST00000641411 SPRR2DP22532 72 aa2.27□□□□□ -2.05
CASC19-227ENST00000641411 KRTAP6-1Q3LI64 71 aa2.23□□□□□ -2.05
CASC19-227ENST00000641411 AHNAK2Q8IVF2 5795 aa2.19□□□□□ -2.06
CASC19-227ENST00000641411 MDN1Q9NU22 5596 aa2.18□□□□□ -2.06
CASC19-227ENST00000641411 KRTAP12-4P60329 112 aa2.09□□□□□ -2.07
CASC19-227ENST00000641411 DSTQ03001 7570 aaKnown RBP2.02□□□□□ -2.09
CASC19-227ENST00000641411 KRTAP6-2Q3LI66 62 aa2.02□□□□□ -2.09
CASC19-227ENST00000641411 AHNAKQ09666 5890 aaKnown RBP2.01□□□□□ -2.09
CASC19-227ENST00000641411 SYNE1Q8NF91 8797 aaKnown RBP1.98□□□□□ -2.09
CASC19-227ENST00000641411 KRTAP20-2Q3LI61 65 aa1.97□□□□□ -2.09
CASC19-227ENST00000641411 KRTAP5-10Q6L8G5 202 aa1.96□□□□□ -2.1
CASC19-227ENST00000641411 MUC5BQ9HC84 5762 aaPredicted RBP1.93□□□□□ -2.1
CASC19-227ENST00000641411 MT4P47944 62 aa1.92□□□□□ -2.1
CASC19-227ENST00000641411 MUC5ACP98088 5654 aa1.81□□□□□ -2.12
CASC19-227ENST00000641411 PRM1P04553 51 aa1.8□□□□□ -2.12
CASC19-227ENST00000641411 PHGR1C9JFL3 82 aa1.24□□□□□ -2.21
CASC19-227ENST00000641411 KRTAP21-1Q3LI58 79 aa1.17□□□□□ -2.22
CASC19-227ENST00000641411 MUC16Q8WXI7 14507 aa1.13□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 140 ms