RNA–Protein interactions for RNA: ENST00000641013.1

CASC19-205, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 1,411 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-205ENST00000641013 KRTAP12-3P60328 96 aa3.05□□□□□ -1.92
CASC19-205ENST00000641013 KRTAP4-1Q9BYQ7 146 aa3.04□□□□□ -1.92
CASC19-205ENST00000641013 MUC17Q685J3 4493 aa3.02□□□□□ -1.93
CASC19-205ENST00000641013 LPAP08519 4548 aa3.01□□□□□ -1.93
CASC19-205ENST00000641013 KRTAP10-5P60370 271 aa3□□□□□ -1.93
CASC19-205ENST00000641013 MUC2Q02817 5179 aa2.95□□□□□ -1.94
CASC19-205ENST00000641013 KRTAP19-8Q3LI54 63 aa2.94□□□□□ -1.94
CASC19-205ENST00000641013 KRTAP9-6A8MVA2 160 aa2.93□□□□□ -1.94
CASC19-205ENST00000641013 KRTAP2-3P0C7H8 128 aa2.93□□□□□ -1.94
CASC19-205ENST00000641013 KRTAP2-4Q9BYR9 128 aa2.93□□□□□ -1.94
CASC19-205ENST00000641013 KRTAP2-1Q9BYU5 128 aa2.93□□□□□ -1.94
CASC19-205ENST00000641013 LCE3CQ5T5A8 94 aa2.92□□□□□ -1.94
CASC19-205ENST00000641013 KRTAP5-2Q701N4 177 aa2.9□□□□□ -1.95
CASC19-205ENST00000641013 MT1XP80297 61 aa2.85□□□□□ -1.95
CASC19-205ENST00000641013 FAT4Q6V0I7 4981 aa2.82□□□□□ -1.96
CASC19-205ENST00000641013 M0R2T5 61 aa2.81□□□□□ -1.96
CASC19-205ENST00000641013 MT1BP07438 61 aa2.76□□□□□ -1.97
CASC19-205ENST00000641013 MT2AP02795 61 aa2.75□□□□□ -1.97
CASC19-205ENST00000641013 FSIP2Q5CZC0 6907 aa2.73□□□□□ -1.97
CASC19-205ENST00000641013 MT1FP04733 61 aa2.73□□□□□ -1.97
CASC19-205ENST00000641013 KRTAP19-5Q3LI72 72 aa2.73□□□□□ -1.97
CASC19-205ENST00000641013 OBSCNQ5VST9 7968 aa2.71□□□□□ -1.98
CASC19-205ENST00000641013 LCE1FQ5T754 118 aa2.71□□□□□ -1.98
CASC19-205ENST00000641013 KRTAP4-3Q9BYR4 195 aa2.71□□□□□ -1.98
CASC19-205ENST00000641013 MT1HP80294 61 aa2.68□□□□□ -1.98
CASC19-205ENST00000641013 KRTAP12-4P60329 112 aa2.59□□□□□ -1.99
CASC19-205ENST00000641013 CRCT1Q9UGL9 99 aa2.59□□□□□ -2
CASC19-205ENST00000641013 MT1EP04732 61 aa2.57□□□□□ -2
CASC19-205ENST00000641013 KRTAP5-8O75690 187 aa2.56□□□□□ -2
CASC19-205ENST00000641013 MT1LQ93083 61 aa2.54□□□□□ -2
CASC19-205ENST00000641013 KRTAP19-7Q3SYF9 63 aa2.53□□□□□ -2
CASC19-205ENST00000641013 USH2AO75445 5202 aa2.49□□□□□ -2.01
CASC19-205ENST00000641013 MT1AP04731 61 aa2.47□□□□□ -2.01
CASC19-205ENST00000641013 SSPOA2VEC9 5147 aa2.46□□□□□ -2.02
CASC19-205ENST00000641013 SYNE2Q8WXH0 6885 aaKnown RBP2.45□□□□□ -2.02
CASC19-205ENST00000641013 FCGBPQ9Y6R7 5405 aaPredicted RBP2.42□□□□□ -2.02
CASC19-205ENST00000641013 MACF1Q9UPN3 7388 aaKnown RBP2.4□□□□□ -2.02
CASC19-205ENST00000641013 LCE3EQ5T5B0 92 aa2.36□□□□□ -2.03
CASC19-205ENST00000641013 KRTAP6-3Q3LI67 103 aa2.34□□□□□ -2.03
CASC19-205ENST00000641013 MT1GP13640 62 aa2.32□□□□□ -2.04
CASC19-205ENST00000641013 PRM1P04553 51 aa2.31□□□□□ -2.04
CASC19-205ENST00000641013 LCE3DQ9BYE3 92 aa2.31□□□□□ -2.04
CASC19-205ENST00000641013 HMCN1Q96RW7 5635 aa2.28□□□□□ -2.04
CASC19-205ENST00000641013 KRTAP19-6Q3LI70 58 aa2.27□□□□□ -2.05
CASC19-205ENST00000641013 KRTAP5-5Q701N2 237 aaPredicted RBP2.27□□□□□ -2.05
CASC19-205ENST00000641013 MT1MQ8N339 61 aa2.26□□□□□ -2.05
CASC19-205ENST00000641013 NEBP20929 6669 aa2.25□□□□□ -2.05
CASC19-205ENST00000641013 MUC12Q9UKN1 5478 aa2.25□□□□□ -2.05
CASC19-205ENST00000641013 KRTAP19-3Q7Z4W3 81 aa2.25□□□□□ -2.05
CASC19-205ENST00000641013 MDN1Q9NU22 5596 aa2.23□□□□□ -2.05
CASC19-205ENST00000641013 SPRR2FQ96RM1 72 aa2.2□□□□□ -2.06
CASC19-205ENST00000641013 LCE1CQ5T751 118 aa2.19□□□□□ -2.06
CASC19-205ENST00000641013 LCE1BQ5T7P3 118 aa2.19□□□□□ -2.06
CASC19-205ENST00000641013 KMT2DO14686 5537 aa2.16□□□□□ -2.06
CASC19-205ENST00000641013 KRTAP20-1Q3LI63 56 aa2.15□□□□□ -2.07
CASC19-205ENST00000641013 KRTAP6-2Q3LI66 62 aa2.13□□□□□ -2.07
CASC19-205ENST00000641013 SPRR2AP35326 72 aa2.12□□□□□ -2.07
CASC19-205ENST00000641013 GPR98Q8WXG9 6306 aa2.12□□□□□ -2.07
CASC19-205ENST00000641013 SYNE1Q8NF91 8797 aaKnown RBP2.1□□□□□ -2.07
CASC19-205ENST00000641013 KRTAP6-1Q3LI64 71 aa2.07□□□□□ -2.08
CASC19-205ENST00000641013 SPRR2EP22531 72 aa2.05□□□□□ -2.08
CASC19-205ENST00000641013 SPRR2BP35325 72 aa2.05□□□□□ -2.08
CASC19-205ENST00000641013 SPRR2DP22532 72 aa1.99□□□□□ -2.09
CASC19-205ENST00000641013 DSTQ03001 7570 aaKnown RBP1.92□□□□□ -2.1
CASC19-205ENST00000641013 AHNAK2Q8IVF2 5795 aa1.79□□□□□ -2.12
CASC19-205ENST00000641013 MUC19Q7Z5P9 8384 aa1.76□□□□□ -2.13
CASC19-205ENST00000641013 MT4P47944 62 aa1.75□□□□□ -2.13
CASC19-205ENST00000641013 KRTAP5-7Q6L8G8 165 aa1.74□□□□□ -2.13
CASC19-205ENST00000641013 KRTAP5-10Q6L8G5 202 aa1.71□□□□□ -2.14
CASC19-205ENST00000641013 AHNAKQ09666 5890 aaKnown RBP1.63□□□□□ -2.15
CASC19-205ENST00000641013 KRTAP21-1Q3LI58 79 aa1.59□□□□□ -2.15
CASC19-205ENST00000641013 KRTAP20-2Q3LI61 65 aa1.57□□□□□ -2.16
CASC19-205ENST00000641013 KRTAP21-2Q3LI59 83 aa1.57□□□□□ -2.16
CASC19-205ENST00000641013 MUC5BQ9HC84 5762 aaPredicted RBP1.56□□□□□ -2.16
CASC19-205ENST00000641013 MUC5ACP98088 5654 aa1.48□□□□□ -2.17
CASC19-205ENST00000641013 PHGR1C9JFL3 82 aa1.03□□□□□ -2.24
CASC19-205ENST00000641013 MUC16Q8WXI7 14507 aa0.77□□□□□ -2.29
Retrieved 77 of 20,778 RNA–protein pairs in 49.5 ms