RNA–Protein interactions for RNA: ENST00000640648.1

NECAP1-227, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 5,166 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-227ENST00000640648 LOC100996750A0A140TA64 210 aa2.77□□□□□ -1.97
NECAP1-227ENST00000640648 KRTAP4-6Q9BYQ5 205 aa2.77□□□□□ -1.97
NECAP1-227ENST00000640648 SYNE1Q8NF91 8797 aaKnown RBP2.77□□□□□ -1.97
NECAP1-227ENST00000640648 MT1GP13640 62 aa2.75□□□□□ -1.97
NECAP1-227ENST00000640648 KRTAP4-7Q9BYR0 210 aa2.74□□□□□ -1.97
NECAP1-227ENST00000640648 LCE3DQ9BYE3 92 aa2.74□□□□□ -1.97
NECAP1-227ENST00000640648 LCE3BQ5TA77 95 aa2.73□□□□□ -1.97
NECAP1-227ENST00000640648 MT1LQ93083 61 aa2.69□□□□□ -1.98
NECAP1-227ENST00000640648 SPRR2EP22531 72 aa2.67□□□□□ -1.98
NECAP1-227ENST00000640648 SPRR2BP35325 72 aa2.67□□□□□ -1.98
NECAP1-227ENST00000640648 SPRR2AP35326 72 aa2.67□□□□□ -1.98
NECAP1-227ENST00000640648 MT1EP04732 61 aa2.65□□□□□ -1.98
NECAP1-227ENST00000640648 MACF1Q9UPN3 7388 aaKnown RBP2.64□□□□□ -1.99
NECAP1-227ENST00000640648 OBSCNQ5VST9 7968 aa2.6□□□□□ -1.99
NECAP1-227ENST00000640648 KRTAP9-7A8MTY7 169 aa2.59□□□□□ -1.99
NECAP1-227ENST00000640648 GPR98Q8WXG9 6306 aa2.59□□□□□ -2
NECAP1-227ENST00000640648 SYNE2Q8WXH0 6885 aaKnown RBP2.59□□□□□ -2
NECAP1-227ENST00000640648 PRM1P04553 51 aa2.59□□□□□ -2
NECAP1-227ENST00000640648 SPRR2DP22532 72 aa2.58□□□□□ -2
NECAP1-227ENST00000640648 MT1AP04731 61 aa2.57□□□□□ -2
NECAP1-227ENST00000640648 KRTAP19-3Q7Z4W3 81 aa2.55□□□□□ -2
NECAP1-227ENST00000640648 KRTAP20-1Q3LI63 56 aa2.55□□□□□ -2
NECAP1-227ENST00000640648 KRTAP4-3Q9BYR4 195 aa2.54□□□□□ -2
NECAP1-227ENST00000640648 USH2AO75445 5202 aa2.52□□□□□ -2.01
NECAP1-227ENST00000640648 KRTAP19-7Q3SYF9 63 aa2.5□□□□□ -2.01
NECAP1-227ENST00000640648 MT1MQ8N339 61 aa2.49□□□□□ -2.01
NECAP1-227ENST00000640648 FCGBPQ9Y6R7 5405 aaPredicted RBP2.47□□□□□ -2.01
NECAP1-227ENST00000640648 KRTAP9-6A8MVA2 160 aa2.44□□□□□ -2.02
NECAP1-227ENST00000640648 DSTQ03001 7570 aaKnown RBP2.44□□□□□ -2.02
NECAP1-227ENST00000640648 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.43□□□□□ -2.02
NECAP1-227ENST00000640648 SSPOA2VEC9 5147 aa2.42□□□□□ -2.02
NECAP1-227ENST00000640648 KMT2DO14686 5537 aa2.41□□□□□ -2.02
NECAP1-227ENST00000640648 KRTAP19-6Q3LI70 58 aa2.4□□□□□ -2.02
NECAP1-227ENST00000640648 KRTAP4-9Q9BYQ8 210 aa2.4□□□□□ -2.02
NECAP1-227ENST00000640648 MT4P47944 62 aa2.37□□□□□ -2.03
NECAP1-227ENST00000640648 KRTAP4-12Q9BQ66 201 aa2.33□□□□□ -2.04
NECAP1-227ENST00000640648 KRTAP6-3Q3LI67 103 aa2.32□□□□□ -2.04
NECAP1-227ENST00000640648 KRTAP9-9Q9BYP9 154 aa2.3□□□□□ -2.04
NECAP1-227ENST00000640648 KRTAP9-4Q9BYQ2 154 aa2.3□□□□□ -2.04
NECAP1-227ENST00000640648 KRTAP2-2Q9BYT5 123 aa2.27□□□□□ -2.05
NECAP1-227ENST00000640648 KRTAP6-2Q3LI66 62 aa2.24□□□□□ -2.05
NECAP1-227ENST00000640648 KRTAP6-1Q3LI64 71 aa2.24□□□□□ -2.05
NECAP1-227ENST00000640648 MUC12Q9UKN1 5478 aa2.22□□□□□ -2.05
NECAP1-227ENST00000640648 NEBP20929 6669 aa2.21□□□□□ -2.06
NECAP1-227ENST00000640648 MDN1Q9NU22 5596 aa2.2□□□□□ -2.06
NECAP1-227ENST00000640648 LCE1DQ5T752 114 aa2.19□□□□□ -2.06
NECAP1-227ENST00000640648 LCE5AQ5TCM9 118 aa2.19□□□□□ -2.06
NECAP1-227ENST00000640648 LCE1AQ5T7P2 110 aa2.18□□□□□ -2.06
NECAP1-227ENST00000640648 LCE1BQ5T7P3 118 aa2.18□□□□□ -2.06
NECAP1-227ENST00000640648 KRTAP4-2Q9BYR5 136 aa2.16□□□□□ -2.06
NECAP1-227ENST00000640648 KRTAP5-9P26371 169 aa2.09□□□□□ -2.07
NECAP1-227ENST00000640648 LCE4AQ5TA78 99 aa2.06□□□□□ -2.08
NECAP1-227ENST00000640648 MUC19Q7Z5P9 8384 aa2.02□□□□□ -2.09
NECAP1-227ENST00000640648 KRTAP4-11Q9BYQ6 195 aa2.02□□□□□ -2.09
NECAP1-227ENST00000640648 KRTAP5-3Q6L8H2 238 aa2□□□□□ -2.09
NECAP1-227ENST00000640648 AHNAKQ09666 5890 aaKnown RBP1.97□□□□□ -2.09
NECAP1-227ENST00000640648 LCE1EQ5T753 118 aa1.96□□□□□ -2.1
NECAP1-227ENST00000640648 LCE1CQ5T751 118 aa1.95□□□□□ -2.1
NECAP1-227ENST00000640648 LCE1FQ5T754 118 aa1.95□□□□□ -2.1
NECAP1-227ENST00000640648 KRTAP5-5Q701N2 237 aaPredicted RBP1.93□□□□□ -2.1
NECAP1-227ENST00000640648 MUC5BQ9HC84 5762 aaPredicted RBP1.86□□□□□ -2.11
NECAP1-227ENST00000640648 HMCN1Q96RW7 5635 aa1.83□□□□□ -2.12
NECAP1-227ENST00000640648 AHNAK2Q8IVF2 5795 aa1.78□□□□□ -2.12
NECAP1-227ENST00000640648 KRTAP5-7Q6L8G8 165 aa1.76□□□□□ -2.13
NECAP1-227ENST00000640648 KRTAP20-2Q3LI61 65 aa1.73□□□□□ -2.13
NECAP1-227ENST00000640648 MUC5ACP98088 5654 aa1.68□□□□□ -2.14
NECAP1-227ENST00000640648 KRTAP5-4Q6L8H1 288 aa1.65□□□□□ -2.14
NECAP1-227ENST00000640648 KRTAP4-4Q9BYR3 166 aa1.64□□□□□ -2.15
NECAP1-227ENST00000640648 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.56□□□□□ -2.16
NECAP1-227ENST00000640648 KRTAP5-10Q6L8G5 202 aa1.52□□□□□ -2.17
NECAP1-227ENST00000640648 KRTAP21-1Q3LI58 79 aa1.46□□□□□ -2.18
NECAP1-227ENST00000640648 KRTAP5-2Q701N4 177 aa1.44□□□□□ -2.18
NECAP1-227ENST00000640648 KRTAP5-8O75690 187 aa1.44□□□□□ -2.18
NECAP1-227ENST00000640648 KRTAP5-11Q6L8G4 156 aa1.39□□□□□ -2.19
NECAP1-227ENST00000640648 PHGR1C9JFL3 82 aa1.38□□□□□ -2.19
NECAP1-227ENST00000640648 KRTAP5-1Q6L8H4 278 aa1.32□□□□□ -2.2
NECAP1-227ENST00000640648 KRTAP21-2Q3LI59 83 aa1.2□□□□□ -2.22
NECAP1-227ENST00000640648 MUC16Q8WXI7 14507 aa0.84□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 136 ms