RNA–Protein interactions for RNA: ENST00000640376.1

RTTN-216, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-216ENST00000640376 KRTAP9-2Q9BYQ4 174 aa3.01□□□□□ -1.93
RTTN-216ENST00000640376 KRTAP2-3P0C7H8 128 aa3□□□□□ -1.93
RTTN-216ENST00000640376 KRTAP2-4Q9BYR9 128 aa3□□□□□ -1.93
RTTN-216ENST00000640376 KRTAP2-1Q9BYU5 128 aa3□□□□□ -1.93
RTTN-216ENST00000640376 MUC12Q9UKN1 5478 aa2.99□□□□□ -1.93
RTTN-216ENST00000640376 KRTAP4-3Q9BYR4 195 aa2.98□□□□□ -1.93
RTTN-216ENST00000640376 LOC100996750A0A140TA64 210 aa2.95□□□□□ -1.94
RTTN-216ENST00000640376 LCE4AQ5TA78 99 aa2.95□□□□□ -1.94
RTTN-216ENST00000640376 KRTAP19-3Q7Z4W3 81 aa2.94□□□□□ -1.94
RTTN-216ENST00000640376 MT1MQ8N339 61 aa2.94□□□□□ -1.94
RTTN-216ENST00000640376 MT1GP13640 62 aa2.93□□□□□ -1.94
RTTN-216ENST00000640376 CRCT1Q9UGL9 99 aa2.9□□□□□ -1.94
RTTN-216ENST00000640376 SPRR2FQ96RM1 72 aa2.89□□□□□ -1.95
RTTN-216ENST00000640376 MACF1Q9UPN3 7388 aaKnown RBP2.85□□□□□ -1.95
RTTN-216ENST00000640376 LCE5AQ5TCM9 118 aa2.84□□□□□ -1.95
RTTN-216ENST00000640376 DSTQ03001 7570 aaKnown RBP2.84□□□□□ -1.96
RTTN-216ENST00000640376 KRTAP5-9P26371 169 aa2.79□□□□□ -1.96
RTTN-216ENST00000640376 KRTAP4-6Q9BYQ5 205 aa2.75□□□□□ -1.97
RTTN-216ENST00000640376 KRTAP9-6A0A140TA67 174 aa2.75□□□□□ -1.97
RTTN-216ENST00000640376 SYNE2Q8WXH0 6885 aaKnown RBP2.74□□□□□ -1.97
RTTN-216ENST00000640376 MDN1Q9NU22 5596 aa2.72□□□□□ -1.97
RTTN-216ENST00000640376 KRTAP9-7A8MTY7 169 aa2.71□□□□□ -1.97
RTTN-216ENST00000640376 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.71□□□□□ -1.98
RTTN-216ENST00000640376 LCE3BQ5TA77 95 aa2.71□□□□□ -1.98
RTTN-216ENST00000640376 KRTAP6-3Q3LI67 103 aa2.68□□□□□ -1.98
RTTN-216ENST00000640376 LCE1AQ5T7P2 110 aa2.68□□□□□ -1.98
RTTN-216ENST00000640376 KRTAP6-1Q3LI64 71 aa2.66□□□□□ -1.98
RTTN-216ENST00000640376 KRTAP12-4P60329 112 aa2.65□□□□□ -1.98
RTTN-216ENST00000640376 SPRR2EP22531 72 aa2.64□□□□□ -1.99
RTTN-216ENST00000640376 SPRR2BP35325 72 aa2.64□□□□□ -1.99
RTTN-216ENST00000640376 SPRR2AP35326 72 aa2.64□□□□□ -1.99
RTTN-216ENST00000640376 KRTAP4-9Q9BYQ8 210 aa2.64□□□□□ -1.99
RTTN-216ENST00000640376 MT1AP04731 61 aa2.62□□□□□ -1.99
RTTN-216ENST00000640376 SYNE1Q8NF91 8797 aaKnown RBP2.61□□□□□ -1.99
RTTN-216ENST00000640376 KRTAP9-9Q9BYP9 154 aa2.6□□□□□ -1.99
RTTN-216ENST00000640376 KRTAP9-4Q9BYQ2 154 aa2.6□□□□□ -1.99
RTTN-216ENST00000640376 KRTAP5-5Q701N2 237 aaPredicted RBP2.59□□□□□ -2
RTTN-216ENST00000640376 SPRR2DP22532 72 aa2.53□□□□□ -2
RTTN-216ENST00000640376 LCE3DQ9BYE3 92 aa2.51□□□□□ -2.01
RTTN-216ENST00000640376 KRTAP4-12Q9BQ66 201 aa2.48□□□□□ -2.01
RTTN-216ENST00000640376 NEBP20929 6669 aa2.48□□□□□ -2.01
RTTN-216ENST00000640376 LCE3EQ5T5B0 92 aa2.47□□□□□ -2.01
RTTN-216ENST00000640376 KRTAP6-2Q3LI66 62 aa2.4□□□□□ -2.03
RTTN-216ENST00000640376 KRTAP5-4Q6L8H1 288 aa2.37□□□□□ -2.03
RTTN-216ENST00000640376 PRM1P04553 51 aa2.35□□□□□ -2.03
RTTN-216ENST00000640376 MT3P25713 68 aa2.35□□□□□ -2.03
RTTN-216ENST00000640376 OBSCNQ5VST9 7968 aa2.35□□□□□ -2.03
RTTN-216ENST00000640376 KRTAP2-2Q9BYT5 123 aa2.25□□□□□ -2.05
RTTN-216ENST00000640376 LCE1DQ5T752 114 aa2.25□□□□□ -2.05
RTTN-216ENST00000640376 MT4P47944 62 aa2.24□□□□□ -2.05
RTTN-216ENST00000640376 KRTAP20-1Q3LI63 56 aa2.24□□□□□ -2.05
RTTN-216ENST00000640376 KRTAP20-2Q3LI61 65 aa2.17□□□□□ -2.06
RTTN-216ENST00000640376 KRTAP5-2Q701N4 177 aa2.17□□□□□ -2.06
RTTN-216ENST00000640376 HMCN1Q96RW7 5635 aa2.16□□□□□ -2.06
RTTN-216ENST00000640376 KRTAP4-11Q9BYQ6 195 aa2.14□□□□□ -2.07
RTTN-216ENST00000640376 LCE1FQ5T754 118 aa2.13□□□□□ -2.07
RTTN-216ENST00000640376 KRTAP5-3Q6L8H2 238 aa2.12□□□□□ -2.07
RTTN-216ENST00000640376 KRTAP4-2Q9BYR5 136 aa2.11□□□□□ -2.07
RTTN-216ENST00000640376 MUC5ACP98088 5654 aa2□□□□□ -2.09
RTTN-216ENST00000640376 LCE1BQ5T7P3 118 aa1.94□□□□□ -2.1
RTTN-216ENST00000640376 LCE1EQ5T753 118 aa1.92□□□□□ -2.1
RTTN-216ENST00000640376 AHNAK2Q8IVF2 5795 aa1.88□□□□□ -2.11
RTTN-216ENST00000640376 KRTAP5-10Q6L8G5 202 aa1.84□□□□□ -2.11
RTTN-216ENST00000640376 KRTAP5-1Q6L8H4 278 aa1.84□□□□□ -2.11
RTTN-216ENST00000640376 LCE1CQ5T751 118 aa1.82□□□□□ -2.12
RTTN-216ENST00000640376 KRTAP5-8O75690 187 aa1.81□□□□□ -2.12
RTTN-216ENST00000640376 KRTAP5-7Q6L8G8 165 aa1.81□□□□□ -2.12
RTTN-216ENST00000640376 MUC5BQ9HC84 5762 aaPredicted RBP1.76□□□□□ -2.13
RTTN-216ENST00000640376 MUC19Q7Z5P9 8384 aa1.75□□□□□ -2.13
RTTN-216ENST00000640376 GPR98Q8WXG9 6306 aa1.71□□□□□ -2.13
RTTN-216ENST00000640376 KRTAP21-2Q3LI59 83 aa1.71□□□□□ -2.14
RTTN-216ENST00000640376 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.71□□□□□ -2.14
RTTN-216ENST00000640376 KRTAP4-4Q9BYR3 166 aa1.59□□□□□ -2.15
RTTN-216ENST00000640376 KRTAP5-11Q6L8G4 156 aa1.58□□□□□ -2.16
RTTN-216ENST00000640376 KRTAP21-1Q3LI58 79 aa1.45□□□□□ -2.18
RTTN-216ENST00000640376 AHNAKQ09666 5890 aaKnown RBP1.37□□□□□ -2.19
RTTN-216ENST00000640376 PHGR1C9JFL3 82 aa1.36□□□□□ -2.19
RTTN-216ENST00000640376 MUC16Q8WXI7 14507 aa0.93□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 146.7 ms