RNA–Protein interactions for RNA: ENST00000640072.1

NECAP1-222, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 3,456 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-222ENST00000640072 KRTAP2-1Q9BYU5 128 aa2.1□□□□□ -2.07
NECAP1-222ENST00000640072 KRTAP10-7P60409 375 aaPredicted RBP2.1□□□□□ -2.07
NECAP1-222ENST00000640072 PCLOQ9Y6V0 5065 aa2.09□□□□□ -2.08
NECAP1-222ENST00000640072 KRTAP19-2Q3LHN2 52 aa2.08□□□□□ -2.08
NECAP1-222ENST00000640072 HMCN2Q8NDA2 5059 aa2.08□□□□□ -2.08
NECAP1-222ENST00000640072 HERC1Q15751 4861 aa2.07□□□□□ -2.08
NECAP1-222ENST00000640072 LCE3DQ9BYE3 92 aa2.05□□□□□ -2.08
NECAP1-222ENST00000640072 SPRR2GQ9BYE4 73 aa2.02□□□□□ -2.09
NECAP1-222ENST00000640072 KRTAP9-3Q9BYQ3 159 aa2.01□□□□□ -2.09
NECAP1-222ENST00000640072 KRTAP4-1Q9BYQ7 146 aa2□□□□□ -2.09
NECAP1-222ENST00000640072 KRTAP9-6A8MVA2 160 aa1.99□□□□□ -2.09
NECAP1-222ENST00000640072 KRTAP19-5Q3LI72 72 aa1.98□□□□□ -2.09
NECAP1-222ENST00000640072 SYNE1Q8NF91 8797 aaKnown RBP1.98□□□□□ -2.09
NECAP1-222ENST00000640072 PRM1P04553 51 aa1.94□□□□□ -2.1
NECAP1-222ENST00000640072 MT1XP80297 61 aa1.9□□□□□ -2.1
NECAP1-222ENST00000640072 OBSCNQ5VST9 7968 aa1.9□□□□□ -2.1
NECAP1-222ENST00000640072 RNF213Q63HN8 5207 aa1.87□□□□□ -2.11
NECAP1-222ENST00000640072 MUC2Q02817 5179 aa1.87□□□□□ -2.11
NECAP1-222ENST00000640072 CRCT1Q9UGL9 99 aa1.86□□□□□ -2.11
NECAP1-222ENST00000640072 MUC19Q7Z5P9 8384 aa1.85□□□□□ -2.11
NECAP1-222ENST00000640072 MT1HP80294 61 aa1.85□□□□□ -2.11
NECAP1-222ENST00000640072 KRTAP19-8Q3LI54 63 aa1.83□□□□□ -2.12
NECAP1-222ENST00000640072 FAT4Q6V0I7 4981 aa1.81□□□□□ -2.12
NECAP1-222ENST00000640072 MT1BP07438 61 aa1.8□□□□□ -2.12
NECAP1-222ENST00000640072 UBR4Q5T4S7 5183 aa1.79□□□□□ -2.12
NECAP1-222ENST00000640072 MT1FP04733 61 aa1.78□□□□□ -2.12
NECAP1-222ENST00000640072 MT2AP02795 61 aa1.77□□□□□ -2.13
NECAP1-222ENST00000640072 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.75□□□□□ -2.13
NECAP1-222ENST00000640072 MT1GP13640 62 aa1.72□□□□□ -2.13
NECAP1-222ENST00000640072 MT1LQ93083 61 aa1.71□□□□□ -2.14
NECAP1-222ENST00000640072 KRTAP5-5Q701N2 237 aaPredicted RBP1.69□□□□□ -2.14
NECAP1-222ENST00000640072 KRTAP6-2Q3LI66 62 aa1.68□□□□□ -2.14
NECAP1-222ENST00000640072 KRTAP19-7Q3SYF9 63 aa1.67□□□□□ -2.14
NECAP1-222ENST00000640072 MT1AP04731 61 aa1.65□□□□□ -2.14
NECAP1-222ENST00000640072 KRTAP19-6Q3LI70 58 aa1.65□□□□□ -2.15
NECAP1-222ENST00000640072 MT1EP04732 61 aa1.64□□□□□ -2.15
NECAP1-222ENST00000640072 SSPOA2VEC9 5147 aa1.64□□□□□ -2.15
NECAP1-222ENST00000640072 KRTAP5-9P26371 169 aa1.63□□□□□ -2.15
NECAP1-222ENST00000640072 USH2AO75445 5202 aa1.62□□□□□ -2.15
NECAP1-222ENST00000640072 KRTAP4-3Q9BYR4 195 aa1.62□□□□□ -2.15
NECAP1-222ENST00000640072 KMT2DO14686 5537 aa1.62□□□□□ -2.15
NECAP1-222ENST00000640072 FCGBPQ9Y6R7 5405 aaPredicted RBP1.57□□□□□ -2.16
NECAP1-222ENST00000640072 SPRR2FQ96RM1 72 aa1.55□□□□□ -2.16
NECAP1-222ENST00000640072 LCE1CQ5T751 118 aa1.54□□□□□ -2.16
NECAP1-222ENST00000640072 LCE1BQ5T7P3 118 aa1.54□□□□□ -2.16
NECAP1-222ENST00000640072 DSTQ03001 7570 aaKnown RBP1.53□□□□□ -2.16
NECAP1-222ENST00000640072 KRTAP19-3Q7Z4W3 81 aa1.51□□□□□ -2.17
NECAP1-222ENST00000640072 MT1MQ8N339 61 aa1.5□□□□□ -2.17
NECAP1-222ENST00000640072 KRTAP5-4Q6L8H1 288 aa1.5□□□□□ -2.17
NECAP1-222ENST00000640072 SPRR2DP22532 72 aa1.48□□□□□ -2.17
NECAP1-222ENST00000640072 SPRR2AP35326 72 aa1.47□□□□□ -2.17
NECAP1-222ENST00000640072 KRTAP6-1Q3LI64 71 aa1.46□□□□□ -2.18
NECAP1-222ENST00000640072 SPRR2EP22531 72 aa1.44□□□□□ -2.18
NECAP1-222ENST00000640072 SPRR2BP35325 72 aa1.44□□□□□ -2.18
NECAP1-222ENST00000640072 KRTAP4-4Q9BYR3 166 aa1.42□□□□□ -2.18
NECAP1-222ENST00000640072 KRTAP5-1Q6L8H4 278 aa1.42□□□□□ -2.18
NECAP1-222ENST00000640072 KRTAP5-11Q6L8G4 156 aa1.39□□□□□ -2.19
NECAP1-222ENST00000640072 KRTAP5-7Q6L8G8 165 aa1.39□□□□□ -2.19
NECAP1-222ENST00000640072 FSIP2Q5CZC0 6907 aa1.36□□□□□ -2.19
NECAP1-222ENST00000640072 KRTAP5-2Q701N4 177 aa1.34□□□□□ -2.19
NECAP1-222ENST00000640072 KRTAP5-8O75690 187 aa1.32□□□□□ -2.2
NECAP1-222ENST00000640072 MUC12Q9UKN1 5478 aa1.31□□□□□ -2.2
NECAP1-222ENST00000640072 MACF1Q9UPN3 7388 aaKnown RBP1.3□□□□□ -2.2
NECAP1-222ENST00000640072 NEBP20929 6669 aa1.29□□□□□ -2.2
NECAP1-222ENST00000640072 KRTAP20-1Q3LI63 56 aa1.29□□□□□ -2.2
NECAP1-222ENST00000640072 SYNE2Q8WXH0 6885 aaKnown RBP1.29□□□□□ -2.2
NECAP1-222ENST00000640072 AHNAKQ09666 5890 aaKnown RBP1.28□□□□□ -2.2
NECAP1-222ENST00000640072 KRTAP21-1Q3LI58 79 aa1.21□□□□□ -2.22
NECAP1-222ENST00000640072 GPR98Q8WXG9 6306 aa1.2□□□□□ -2.22
NECAP1-222ENST00000640072 MDN1Q9NU22 5596 aa1.18□□□□□ -2.22
NECAP1-222ENST00000640072 KRTAP5-10Q6L8G5 202 aa1.17□□□□□ -2.22
NECAP1-222ENST00000640072 AHNAK2Q8IVF2 5795 aa1.16□□□□□ -2.22
NECAP1-222ENST00000640072 KRTAP20-2Q3LI61 65 aa1.09□□□□□ -2.23
NECAP1-222ENST00000640072 MUC5ACP98088 5654 aa1.09□□□□□ -2.23
NECAP1-222ENST00000640072 MT4P47944 62 aa0.95□□□□□ -2.26
NECAP1-222ENST00000640072 MUC16Q8WXI7 14507 aa0.87□□□□□ -2.27
NECAP1-222ENST00000640072 KRTAP21-2Q3LI59 83 aa0.85□□□□□ -2.27
NECAP1-222ENST00000640072 PHGR1C9JFL3 82 aa0.72□□□□□ -2.29
Retrieved 78 of 20,778 RNA–protein pairs in 37.8 ms