RNA–Protein interactions for RNA: ENST00000640021.1

NOTCH2-208, Transcript of notch 2, humanhuman

TSL 5

Gene NOTCH2, Length 2,058 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH2-208ENST00000640021 SSPOA2VEC9 5147 aa4.22□□□□□ -1.73
NOTCH2-208ENST00000640021 MT1GP13640 62 aa4.03□□□□□ -1.76
NOTCH2-208ENST00000640021 KRTAP19-3Q7Z4W3 81 aa4.01□□□□□ -1.77
NOTCH2-208ENST00000640021 MT1MQ8N339 61 aa3.99□□□□□ -1.77
NOTCH2-208ENST00000640021 KRTAP4-3Q9BYR4 195 aa3.99□□□□□ -1.77
NOTCH2-208ENST00000640021 LOC100996750A0A140TA64 210 aa3.98□□□□□ -1.77
NOTCH2-208ENST00000640021 FSIP2Q5CZC0 6907 aa3.95□□□□□ -1.78
NOTCH2-208ENST00000640021 FCGBPQ9Y6R7 5405 aaPredicted RBP3.91□□□□□ -1.78
NOTCH2-208ENST00000640021 LCE5AQ5TCM9 118 aa3.87□□□□□ -1.79
NOTCH2-208ENST00000640021 CRCT1Q9UGL9 99 aa3.86□□□□□ -1.79
NOTCH2-208ENST00000640021 MUC12Q9UKN1 5478 aa3.86□□□□□ -1.79
NOTCH2-208ENST00000640021 SPRR2FQ96RM1 72 aa3.86□□□□□ -1.79
NOTCH2-208ENST00000640021 KRTAP4-6Q9BYQ5 205 aa3.85□□□□□ -1.79
NOTCH2-208ENST00000640021 KRTAP9-2Q9BYQ4 174 aa3.74□□□□□ -1.81
NOTCH2-208ENST00000640021 KRTAP12-4P60329 112 aa3.73□□□□□ -1.81
NOTCH2-208ENST00000640021 DSTQ03001 7570 aaKnown RBP3.69□□□□□ -1.82
NOTCH2-208ENST00000640021 MACF1Q9UPN3 7388 aaKnown RBP3.68□□□□□ -1.82
NOTCH2-208ENST00000640021 LCE3BQ5TA77 95 aa3.67□□□□□ -1.82
NOTCH2-208ENST00000640021 MT1AP04731 61 aa3.64□□□□□ -1.83
NOTCH2-208ENST00000640021 KRTAP6-1Q3LI64 71 aa3.61□□□□□ -1.83
NOTCH2-208ENST00000640021 KRTAP5-9P26371 169 aa3.59□□□□□ -1.83
NOTCH2-208ENST00000640021 LCE1AQ5T7P2 110 aa3.59□□□□□ -1.83
NOTCH2-208ENST00000640021 KRTAP4-9Q9BYQ8 210 aa3.55□□□□□ -1.84
NOTCH2-208ENST00000640021 KRTAP5-5Q701N2 237 aaPredicted RBP3.52□□□□□ -1.85
NOTCH2-208ENST00000640021 SYNE2Q8WXH0 6885 aaKnown RBP3.52□□□□□ -1.85
NOTCH2-208ENST00000640021 LCE3DQ9BYE3 92 aa3.51□□□□□ -1.85
NOTCH2-208ENST00000640021 SPRR2EP22531 72 aa3.51□□□□□ -1.85
NOTCH2-208ENST00000640021 SPRR2BP35325 72 aa3.51□□□□□ -1.85
NOTCH2-208ENST00000640021 SPRR2AP35326 72 aa3.51□□□□□ -1.85
NOTCH2-208ENST00000640021 SYNE1Q8NF91 8797 aaKnown RBP3.51□□□□□ -1.85
NOTCH2-208ENST00000640021 MDN1Q9NU22 5596 aa3.49□□□□□ -1.85
NOTCH2-208ENST00000640021 LCE3EQ5T5B0 92 aa3.47□□□□□ -1.85
NOTCH2-208ENST00000640021 KRTAP9-4Q9BYQ2 154 aa3.4□□□□□ -1.86
NOTCH2-208ENST00000640021 KRTAP9-6A0A140TA67 174 aa3.4□□□□□ -1.87
NOTCH2-208ENST00000640021 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.38□□□□□ -1.87
NOTCH2-208ENST00000640021 SPRR2DP22532 72 aa3.37□□□□□ -1.87
NOTCH2-208ENST00000640021 KRTAP9-7A8MTY7 169 aa3.29□□□□□ -1.88
NOTCH2-208ENST00000640021 PRM1P04553 51 aa3.28□□□□□ -1.88
NOTCH2-208ENST00000640021 KRTAP6-3Q3LI67 103 aa3.28□□□□□ -1.88
NOTCH2-208ENST00000640021 MT3P25713 68 aa3.27□□□□□ -1.89
NOTCH2-208ENST00000640021 KRTAP6-2Q3LI66 62 aa3.24□□□□□ -1.89
NOTCH2-208ENST00000640021 KRTAP9-9Q9BYP9 154 aa3.2□□□□□ -1.9
NOTCH2-208ENST00000640021 KRTAP4-12Q9BQ66 201 aa3.18□□□□□ -1.9
NOTCH2-208ENST00000640021 KRTAP5-4Q6L8H1 288 aa3.11□□□□□ -1.91
NOTCH2-208ENST00000640021 LCE1DQ5T752 114 aa3.05□□□□□ -1.92
NOTCH2-208ENST00000640021 NEBP20929 6669 aa3.01□□□□□ -1.93
NOTCH2-208ENST00000640021 OBSCNQ5VST9 7968 aa3.01□□□□□ -1.93
NOTCH2-208ENST00000640021 KRTAP4-2Q9BYR5 136 aa2.98□□□□□ -1.93
NOTCH2-208ENST00000640021 LCE4AQ5TA78 99 aa2.95□□□□□ -1.94
NOTCH2-208ENST00000640021 MT4P47944 62 aa2.94□□□□□ -1.94
NOTCH2-208ENST00000640021 KRTAP20-2Q3LI61 65 aa2.91□□□□□ -1.94
NOTCH2-208ENST00000640021 KRTAP5-2Q701N4 177 aa2.91□□□□□ -1.94
NOTCH2-208ENST00000640021 KRTAP2-2Q9BYT5 123 aa2.89□□□□□ -1.95
NOTCH2-208ENST00000640021 KRTAP5-3Q6L8H2 238 aa2.84□□□□□ -1.95
NOTCH2-208ENST00000640021 KRTAP4-11Q9BYQ6 195 aa2.84□□□□□ -1.95
NOTCH2-208ENST00000640021 KRTAP20-1Q3LI63 56 aa2.78□□□□□ -1.96
NOTCH2-208ENST00000640021 HMCN1Q96RW7 5635 aa2.73□□□□□ -1.97
NOTCH2-208ENST00000640021 LCE1EQ5T753 118 aa2.68□□□□□ -1.98
NOTCH2-208ENST00000640021 MUC5ACP98088 5654 aa2.66□□□□□ -1.98
NOTCH2-208ENST00000640021 LCE1BQ5T7P3 118 aa2.59□□□□□ -1.99
NOTCH2-208ENST00000640021 KRTAP5-10Q6L8G5 202 aa2.54□□□□□ -2
NOTCH2-208ENST00000640021 KRTAP5-1Q6L8H4 278 aa2.53□□□□□ -2.01
NOTCH2-208ENST00000640021 LCE1CQ5T751 118 aa2.52□□□□□ -2.01
NOTCH2-208ENST00000640021 GPR98Q8WXG9 6306 aa2.43□□□□□ -2.02
NOTCH2-208ENST00000640021 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.38□□□□□ -2.03
NOTCH2-208ENST00000640021 KRTAP21-2Q3LI59 83 aa2.33□□□□□ -2.04
NOTCH2-208ENST00000640021 KRTAP5-8O75690 187 aa2.3□□□□□ -2.04
NOTCH2-208ENST00000640021 AHNAK2Q8IVF2 5795 aa2.29□□□□□ -2.04
NOTCH2-208ENST00000640021 KRTAP5-7Q6L8G8 165 aa2.29□□□□□ -2.04
NOTCH2-208ENST00000640021 KRTAP5-11Q6L8G4 156 aa2.16□□□□□ -2.06
NOTCH2-208ENST00000640021 KRTAP4-4Q9BYR3 166 aa2.1□□□□□ -2.07
NOTCH2-208ENST00000640021 KRTAP21-1Q3LI58 79 aa2.08□□□□□ -2.08
NOTCH2-208ENST00000640021 MUC5BQ9HC84 5762 aaPredicted RBP1.98□□□□□ -2.09
NOTCH2-208ENST00000640021 LCE1FQ5T754 118 aa1.93□□□□□ -2.1
NOTCH2-208ENST00000640021 MUC19Q7Z5P9 8384 aa1.93□□□□□ -2.1
NOTCH2-208ENST00000640021 AHNAKQ09666 5890 aaKnown RBP1.86□□□□□ -2.11
NOTCH2-208ENST00000640021 PHGR1C9JFL3 82 aa1.86□□□□□ -2.11
NOTCH2-208ENST00000640021 MUC16Q8WXI7 14507 aa1.26□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 35.8 ms