RNA–Protein interactions for RNA: ENST00000639950.1

PAX6-262, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-262ENST00000639950 KRTAP9-2Q9BYQ4 174 aa6.42□□□□□ -1.38
PAX6-262ENST00000639950 KRTAP4-3Q9BYR4 195 aa6.4□□□□□ -1.38
PAX6-262ENST00000639950 KRTAP19-4Q3LI73 84 aa6.38□□□□□ -1.39
PAX6-262ENST00000639950 KRTAP19-3Q7Z4W3 81 aa6.34□□□□□ -1.39
PAX6-262ENST00000639950 SPRR2FQ96RM1 72 aa6.32□□□□□ -1.4
PAX6-262ENST00000639950 MT1MQ8N339 61 aa6.31□□□□□ -1.4
PAX6-262ENST00000639950 LOC100996750A0A140TA64 210 aa6.28□□□□□ -1.4
PAX6-262ENST00000639950 SYNE2Q8WXH0 6885 aaKnown RBP6.27□□□□□ -1.41
PAX6-262ENST00000639950 MT1GP13640 62 aa6.26□□□□□ -1.41
PAX6-262ENST00000639950 CRCT1Q9UGL9 99 aa6.22□□□□□ -1.41
PAX6-262ENST00000639950 LCE5AQ5TCM9 118 aa6.19□□□□□ -1.42
PAX6-262ENST00000639950 DSTQ03001 7570 aaKnown RBP6.17□□□□□ -1.42
PAX6-262ENST00000639950 KRTAP2-3P0C7H8 128 aa6.14□□□□□ -1.43
PAX6-262ENST00000639950 KRTAP2-4Q9BYR9 128 aa6.14□□□□□ -1.43
PAX6-262ENST00000639950 KRTAP2-1Q9BYU5 128 aa6.14□□□□□ -1.43
PAX6-262ENST00000639950 MDN1Q9NU22 5596 aa6.13□□□□□ -1.43
PAX6-262ENST00000639950 KRTAP5-9P26371 169 aa6□□□□□ -1.45
PAX6-262ENST00000639950 LCE1AQ5T7P2 110 aa5.96□□□□□ -1.45
PAX6-262ENST00000639950 INE1O15225 51 aa5.92□□□□□ -1.46
PAX6-262ENST00000639950 SPRR2EP22531 72 aa5.85□□□□□ -1.47
PAX6-262ENST00000639950 SPRR2BP35325 72 aa5.85□□□□□ -1.47
PAX6-262ENST00000639950 SPRR2AP35326 72 aa5.85□□□□□ -1.47
PAX6-262ENST00000639950 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.76□□□□□ -1.49
PAX6-262ENST00000639950 KRTAP9-6A0A140TA67 174 aa5.67□□□□□ -1.5
PAX6-262ENST00000639950 KRTAP6-1Q3LI64 71 aa5.67□□□□□ -1.5
PAX6-262ENST00000639950 KRTAP6-3Q3LI67 103 aa5.66□□□□□ -1.5
PAX6-262ENST00000639950 LCE3BQ5TA77 95 aa5.65□□□□□ -1.51
PAX6-262ENST00000639950 KRTAP5-5Q701N2 237 aaPredicted RBP5.62□□□□□ -1.51
PAX6-262ENST00000639950 SPRR2DP22532 72 aa5.6□□□□□ -1.51
PAX6-262ENST00000639950 MT1AP04731 61 aa5.58□□□□□ -1.52
PAX6-262ENST00000639950 SYNE1Q8NF91 8797 aaKnown RBP5.57□□□□□ -1.52
PAX6-262ENST00000639950 KRTAP4-9Q9BYQ8 210 aa5.51□□□□□ -1.53
PAX6-262ENST00000639950 KRTAP12-4P60329 112 aa5.35□□□□□ -1.55
PAX6-262ENST00000639950 NEBP20929 6669 aa5.35□□□□□ -1.55
PAX6-262ENST00000639950 KRTAP9-4Q9BYQ2 154 aa5.29□□□□□ -1.56
PAX6-262ENST00000639950 KRTAP9-7A8MTY7 169 aa5.27□□□□□ -1.57
PAX6-262ENST00000639950 LCE3DQ9BYE3 92 aa5.16□□□□□ -1.58
PAX6-262ENST00000639950 KRTAP6-2Q3LI66 62 aa5.14□□□□□ -1.59
PAX6-262ENST00000639950 KRTAP5-4Q6L8H1 288 aa5.11□□□□□ -1.59
PAX6-262ENST00000639950 LCE3EQ5T5B0 92 aa5.05□□□□□ -1.6
PAX6-262ENST00000639950 OBSCNQ5VST9 7968 aa5.01□□□□□ -1.61
PAX6-262ENST00000639950 MT3P25713 68 aa5□□□□□ -1.61
PAX6-262ENST00000639950 KRTAP4-6Q9BYQ5 205 aa5□□□□□ -1.61
PAX6-262ENST00000639950 MT4P47944 62 aa4.97□□□□□ -1.61
PAX6-262ENST00000639950 LCE4AQ5TA78 99 aa4.84□□□□□ -1.64
PAX6-262ENST00000639950 KRTAP20-2Q3LI61 65 aa4.82□□□□□ -1.64
PAX6-262ENST00000639950 HMCN1Q96RW7 5635 aa4.81□□□□□ -1.64
PAX6-262ENST00000639950 KRTAP2-2Q9BYT5 123 aa4.78□□□□□ -1.64
PAX6-262ENST00000639950 LCE1DQ5T752 114 aa4.75□□□□□ -1.65
PAX6-262ENST00000639950 KRTAP5-2Q701N4 177 aa4.72□□□□□ -1.65
PAX6-262ENST00000639950 PRM1P04553 51 aa4.7□□□□□ -1.66
PAX6-262ENST00000639950 KRTAP20-1Q3LI63 56 aa4.66□□□□□ -1.66
PAX6-262ENST00000639950 KRTAP5-3Q6L8H2 238 aa4.61□□□□□ -1.67
PAX6-262ENST00000639950 MUC5ACP98088 5654 aa4.27□□□□□ -1.73
PAX6-262ENST00000639950 LCE1EQ5T753 118 aa4.18□□□□□ -1.74
PAX6-262ENST00000639950 LCE1BQ5T7P3 118 aa4.15□□□□□ -1.75
PAX6-262ENST00000639950 KRTAP5-1Q6L8H4 278 aa4.07□□□□□ -1.76
PAX6-262ENST00000639950 KRTAP4-11Q9BYQ6 195 aa4.07□□□□□ -1.76
PAX6-262ENST00000639950 KRTAP4-12Q9BQ66 201 aa4.05□□□□□ -1.76
PAX6-262ENST00000639950 KRTAP4-2Q9BYR5 136 aa4.03□□□□□ -1.76
PAX6-262ENST00000639950 KRTAP5-10Q6L8G5 202 aa4.01□□□□□ -1.77
PAX6-262ENST00000639950 AHNAK2Q8IVF2 5795 aa4.01□□□□□ -1.77
PAX6-262ENST00000639950 LCE1CQ5T751 118 aa3.95□□□□□ -1.78
PAX6-262ENST00000639950 KRTAP5-8O75690 187 aa3.92□□□□□ -1.78
PAX6-262ENST00000639950 KRTAP9-9Q9BYP9 154 aa3.92□□□□□ -1.78
PAX6-262ENST00000639950 KRTAP5-7Q6L8G8 165 aa3.77□□□□□ -1.81
PAX6-262ENST00000639950 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.7□□□□□ -1.82
PAX6-262ENST00000639950 KRTAP21-2Q3LI59 83 aa3.67□□□□□ -1.82
PAX6-262ENST00000639950 MUC5BQ9HC84 5762 aaPredicted RBP3.54□□□□□ -1.84
PAX6-262ENST00000639950 LCE1FQ5T754 118 aa3.51□□□□□ -1.85
PAX6-262ENST00000639950 GPR98Q8WXG9 6306 aa3.46□□□□□ -1.86
PAX6-262ENST00000639950 KRTAP5-11Q6L8G4 156 aa3.43□□□□□ -1.86
PAX6-262ENST00000639950 KRTAP4-4Q9BYR3 166 aa3.4□□□□□ -1.87
PAX6-262ENST00000639950 MUC19Q7Z5P9 8384 aa3.02□□□□□ -1.93
PAX6-262ENST00000639950 PHGR1C9JFL3 82 aa2.98□□□□□ -1.93
PAX6-262ENST00000639950 KRTAP21-1Q3LI58 79 aa2.88□□□□□ -1.95
PAX6-262ENST00000639950 AHNAKQ09666 5890 aaKnown RBP2.82□□□□□ -1.96
PAX6-262ENST00000639950 MUC16Q8WXI7 14507 aa1.97□□□□□ -2.09
Retrieved 78 of 20,778 RNA–protein pairs in 59.1 ms