RNA–Protein interactions for RNA: ENST00000639594.1

CROCCP2-206, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 2, humanhuman

TSL 1 (best)

Gene CROCCP2, Length 2,175 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP2-206ENST00000639594 MACF1Q9UPN3 7388 aaKnown RBP6.58□□□□□ -1.36
CROCCP2-206ENST00000639594 KRTAP19-4Q3LI73 84 aa6.52□□□□□ -1.36
CROCCP2-206ENST00000639594 INE1O15225 51 aa6.48□□□□□ -1.37
CROCCP2-206ENST00000639594 SYNE2Q8WXH0 6885 aaKnown RBP6.43□□□□□ -1.38
CROCCP2-206ENST00000639594 MUC12Q9UKN1 5478 aa6.42□□□□□ -1.38
CROCCP2-206ENST00000639594 KRTAP2-3P0C7H8 128 aa6.33□□□□□ -1.4
CROCCP2-206ENST00000639594 KRTAP2-4Q9BYR9 128 aa6.33□□□□□ -1.4
CROCCP2-206ENST00000639594 KRTAP2-1Q9BYU5 128 aa6.33□□□□□ -1.4
CROCCP2-206ENST00000639594 KRTAP9-6A0A140TA67 174 aa6.29□□□□□ -1.4
CROCCP2-206ENST00000639594 SPRR2FQ96RM1 72 aa6.27□□□□□ -1.41
CROCCP2-206ENST00000639594 KRTAP4-3Q9BYR4 195 aa6.27□□□□□ -1.41
CROCCP2-206ENST00000639594 KRTAP19-3Q7Z4W3 81 aa6.22□□□□□ -1.41
CROCCP2-206ENST00000639594 LOC100996750A0A140TA64 210 aa6.2□□□□□ -1.42
CROCCP2-206ENST00000639594 MT1MQ8N339 61 aa6.2□□□□□ -1.42
CROCCP2-206ENST00000639594 MT1GP13640 62 aa6.18□□□□□ -1.42
CROCCP2-206ENST00000639594 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.16□□□□□ -1.42
CROCCP2-206ENST00000639594 MDN1Q9NU22 5596 aa6.15□□□□□ -1.43
CROCCP2-206ENST00000639594 KRTAP5-9P26371 169 aa6.13□□□□□ -1.43
CROCCP2-206ENST00000639594 LCE5AQ5TCM9 118 aa6.04□□□□□ -1.44
CROCCP2-206ENST00000639594 LCE1AQ5T7P2 110 aa5.99□□□□□ -1.45
CROCCP2-206ENST00000639594 KRTAP6-3Q3LI67 103 aa5.97□□□□□ -1.45
CROCCP2-206ENST00000639594 DSTQ03001 7570 aaKnown RBP5.95□□□□□ -1.46
CROCCP2-206ENST00000639594 SPRR2EP22531 72 aa5.91□□□□□ -1.46
CROCCP2-206ENST00000639594 SPRR2BP35325 72 aa5.91□□□□□ -1.46
CROCCP2-206ENST00000639594 SPRR2AP35326 72 aa5.91□□□□□ -1.46
CROCCP2-206ENST00000639594 KRTAP9-7A8MTY7 169 aa5.79□□□□□ -1.48
CROCCP2-206ENST00000639594 NEBP20929 6669 aa5.69□□□□□ -1.5
CROCCP2-206ENST00000639594 SPRR2DP22532 72 aa5.68□□□□□ -1.5
CROCCP2-206ENST00000639594 LCE3BQ5TA77 95 aa5.64□□□□□ -1.51
CROCCP2-206ENST00000639594 KRTAP6-1Q3LI64 71 aa5.61□□□□□ -1.51
CROCCP2-206ENST00000639594 KRTAP12-4P60329 112 aa5.55□□□□□ -1.52
CROCCP2-206ENST00000639594 MT1AP04731 61 aa5.55□□□□□ -1.52
CROCCP2-206ENST00000639594 KRTAP4-9Q9BYQ8 210 aa5.51□□□□□ -1.53
CROCCP2-206ENST00000639594 KRTAP5-5Q701N2 237 aaPredicted RBP5.5□□□□□ -1.53
CROCCP2-206ENST00000639594 SYNE1Q8NF91 8797 aaKnown RBP5.36□□□□□ -1.55
CROCCP2-206ENST00000639594 LCE3DQ9BYE3 92 aa5.27□□□□□ -1.57
CROCCP2-206ENST00000639594 KRTAP9-4Q9BYQ2 154 aa5.25□□□□□ -1.57
CROCCP2-206ENST00000639594 LCE3EQ5T5B0 92 aa5.19□□□□□ -1.58
CROCCP2-206ENST00000639594 KRTAP5-4Q6L8H1 288 aa5.14□□□□□ -1.59
CROCCP2-206ENST00000639594 KRTAP20-1Q3LI63 56 aa5.1□□□□□ -1.59
CROCCP2-206ENST00000639594 KRTAP2-2Q9BYT5 123 aa5.1□□□□□ -1.59
CROCCP2-206ENST00000639594 KRTAP6-2Q3LI66 62 aa5.04□□□□□ -1.6
CROCCP2-206ENST00000639594 MT4P47944 62 aa4.99□□□□□ -1.61
CROCCP2-206ENST00000639594 MT3P25713 68 aa4.98□□□□□ -1.61
CROCCP2-206ENST00000639594 KRTAP4-6Q9BYQ5 205 aa4.98□□□□□ -1.61
CROCCP2-206ENST00000639594 LCE4AQ5TA78 99 aa4.97□□□□□ -1.61
CROCCP2-206ENST00000639594 HMCN1Q96RW7 5635 aa4.91□□□□□ -1.62
CROCCP2-206ENST00000639594 PRM1P04553 51 aa4.89□□□□□ -1.63
CROCCP2-206ENST00000639594 LCE1DQ5T752 114 aa4.88□□□□□ -1.63
CROCCP2-206ENST00000639594 KRTAP20-2Q3LI61 65 aa4.83□□□□□ -1.64
CROCCP2-206ENST00000639594 OBSCNQ5VST9 7968 aa4.73□□□□□ -1.65
CROCCP2-206ENST00000639594 KRTAP5-2Q701N4 177 aa4.67□□□□□ -1.66
CROCCP2-206ENST00000639594 KRTAP5-3Q6L8H2 238 aa4.65□□□□□ -1.67
CROCCP2-206ENST00000639594 KRTAP4-12Q9BQ66 201 aa4.44□□□□□ -1.7
CROCCP2-206ENST00000639594 AHNAK2Q8IVF2 5795 aa4.29□□□□□ -1.72
CROCCP2-206ENST00000639594 KRTAP9-9Q9BYP9 154 aa4.23□□□□□ -1.73
CROCCP2-206ENST00000639594 GPR98Q8WXG9 6306 aa4.17□□□□□ -1.74
CROCCP2-206ENST00000639594 KRTAP4-11Q9BYQ6 195 aa4.17□□□□□ -1.74
CROCCP2-206ENST00000639594 MUC5ACP98088 5654 aa4.16□□□□□ -1.74
CROCCP2-206ENST00000639594 LCE1EQ5T753 118 aa4.12□□□□□ -1.75
CROCCP2-206ENST00000639594 KRTAP5-1Q6L8H4 278 aa4.07□□□□□ -1.76
CROCCP2-206ENST00000639594 LCE1BQ5T7P3 118 aa4.04□□□□□ -1.76
CROCCP2-206ENST00000639594 KRTAP5-8O75690 187 aa4.02□□□□□ -1.77
CROCCP2-206ENST00000639594 KRTAP5-10Q6L8G5 202 aa3.99□□□□□ -1.77
CROCCP2-206ENST00000639594 KRTAP4-2Q9BYR5 136 aa3.93□□□□□ -1.78
CROCCP2-206ENST00000639594 LCE1CQ5T751 118 aa3.88□□□□□ -1.79
CROCCP2-206ENST00000639594 KRTAP5-7Q6L8G8 165 aa3.85□□□□□ -1.79
CROCCP2-206ENST00000639594 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.66□□□□□ -1.82
CROCCP2-206ENST00000639594 KRTAP21-2Q3LI59 83 aa3.63□□□□□ -1.83
CROCCP2-206ENST00000639594 MUC5BQ9HC84 5762 aaPredicted RBP3.58□□□□□ -1.84
CROCCP2-206ENST00000639594 KRTAP5-11Q6L8G4 156 aa3.4□□□□□ -1.87
CROCCP2-206ENST00000639594 KRTAP4-4Q9BYR3 166 aa3.31□□□□□ -1.88
CROCCP2-206ENST00000639594 AHNAKQ09666 5890 aaKnown RBP3.19□□□□□ -1.9
CROCCP2-206ENST00000639594 KRTAP21-1Q3LI58 79 aa3.06□□□□□ -1.92
CROCCP2-206ENST00000639594 LCE1FQ5T754 118 aa2.99□□□□□ -1.93
CROCCP2-206ENST00000639594 MUC19Q7Z5P9 8384 aa2.95□□□□□ -1.94
CROCCP2-206ENST00000639594 PHGR1C9JFL3 82 aa2.94□□□□□ -1.94
CROCCP2-206ENST00000639594 MUC16Q8WXI7 14507 aa1.97□□□□□ -2.09
Retrieved 78 of 20,778 RNA–protein pairs in 120 ms