RNA–Protein interactions for RNA: ENST00000639534.1

CHD1L-211, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 5 BASIC

Gene CHD1L, Length 1,144 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-211ENST00000639534 KRTAP9-9Q9BYP9 154 aa5.04□□□□□ -1.6
CHD1L-211ENST00000639534 KRTAP9-4Q9BYQ2 154 aa5.04□□□□□ -1.6
CHD1L-211ENST00000639534 FCGBPQ9Y6R7 5405 aaPredicted RBP5.04□□□□□ -1.6
CHD1L-211ENST00000639534 CRCT1Q9UGL9 99 aa5.03□□□□□ -1.6
CHD1L-211ENST00000639534 KMT2DO14686 5537 aa5.02□□□□□ -1.61
CHD1L-211ENST00000639534 MT1GP13640 62 aa4.98□□□□□ -1.61
CHD1L-211ENST00000639534 KRTAP19-3Q7Z4W3 81 aa4.97□□□□□ -1.61
CHD1L-211ENST00000639534 A0A0A0MQY5 61 aa4.94□□□□□ -1.62
CHD1L-211ENST00000639534 SPRR2FQ96RM1 72 aa4.93□□□□□ -1.62
CHD1L-211ENST00000639534 KRTAP4-7Q9BYR0 210 aa4.92□□□□□ -1.62
CHD1L-211ENST00000639534 MT1MQ8N339 61 aa4.89□□□□□ -1.63
CHD1L-211ENST00000639534 KRTAP9-6A8MVA2 160 aa4.87□□□□□ -1.63
CHD1L-211ENST00000639534 LCE1DQ5T752 114 aa4.86□□□□□ -1.63
CHD1L-211ENST00000639534 LCE5AQ5TCM9 118 aa4.84□□□□□ -1.63
CHD1L-211ENST00000639534 KRTAP5-9P26371 169 aa4.82□□□□□ -1.64
CHD1L-211ENST00000639534 MACF1Q9UPN3 7388 aaKnown RBP4.81□□□□□ -1.64
CHD1L-211ENST00000639534 KRTAP4-3Q9BYR4 195 aa4.72□□□□□ -1.65
CHD1L-211ENST00000639534 KRTAP4-9Q9BYQ8 210 aa4.71□□□□□ -1.66
CHD1L-211ENST00000639534 KRTAP2-3P0C7H8 128 aa4.68□□□□□ -1.66
CHD1L-211ENST00000639534 LCE1AQ5T7P2 110 aa4.68□□□□□ -1.66
CHD1L-211ENST00000639534 KRTAP2-4Q9BYR9 128 aa4.68□□□□□ -1.66
CHD1L-211ENST00000639534 KRTAP2-1Q9BYU5 128 aa4.68□□□□□ -1.66
CHD1L-211ENST00000639534 KRTAP6-3Q3LI67 103 aa4.66□□□□□ -1.66
CHD1L-211ENST00000639534 SPRR2EP22531 72 aa4.63□□□□□ -1.67
CHD1L-211ENST00000639534 SPRR2BP35325 72 aa4.63□□□□□ -1.67
CHD1L-211ENST00000639534 SPRR2AP35326 72 aa4.63□□□□□ -1.67
CHD1L-211ENST00000639534 MUC12Q9UKN1 5478 aa4.63□□□□□ -1.67
CHD1L-211ENST00000639534 LCE4AQ5TA78 99 aa4.61□□□□□ -1.67
CHD1L-211ENST00000639534 INE1O15225 51 aa4.6□□□□□ -1.67
CHD1L-211ENST00000639534 KRTAP4-2Q9BYR5 136 aa4.6□□□□□ -1.67
CHD1L-211ENST00000639534 SYNE2Q8WXH0 6885 aaKnown RBP4.57□□□□□ -1.68
CHD1L-211ENST00000639534 KRTAP9-7A8MTY7 169 aa4.56□□□□□ -1.68
CHD1L-211ENST00000639534 KRTAP4-11Q9BYQ6 195 aa4.54□□□□□ -1.68
CHD1L-211ENST00000639534 SPRR2DP22532 72 aa4.47□□□□□ -1.69
CHD1L-211ENST00000639534 MT1AP04731 61 aa4.39□□□□□ -1.71
CHD1L-211ENST00000639534 KRTAP5-5Q701N2 237 aaPredicted RBP4.37□□□□□ -1.71
CHD1L-211ENST00000639534 MDN1Q9NU22 5596 aa4.36□□□□□ -1.71
CHD1L-211ENST00000639534 DSTQ03001 7570 aaKnown RBP4.31□□□□□ -1.72
CHD1L-211ENST00000639534 KRTAP6-1Q3LI64 71 aa4.29□□□□□ -1.72
CHD1L-211ENST00000639534 NEBP20929 6669 aa4.18□□□□□ -1.74
CHD1L-211ENST00000639534 KRTAP5-4Q6L8H1 288 aa4.09□□□□□ -1.75
CHD1L-211ENST00000639534 KRTAP5-3Q6L8H2 238 aa4.09□□□□□ -1.75
CHD1L-211ENST00000639534 KRTAP12-4P60329 112 aa4.06□□□□□ -1.76
CHD1L-211ENST00000639534 SYNE1Q8NF91 8797 aaKnown RBP4.02□□□□□ -1.77
CHD1L-211ENST00000639534 MT3P25713 68 aa3.99□□□□□ -1.77
CHD1L-211ENST00000639534 LCE3DQ9BYE3 92 aa3.98□□□□□ -1.77
CHD1L-211ENST00000639534 KRTAP2-2Q9BYT5 123 aa3.96□□□□□ -1.78
CHD1L-211ENST00000639534 KRTAP6-2Q3LI66 62 aa3.92□□□□□ -1.78
CHD1L-211ENST00000639534 LCE3EQ5T5B0 92 aa3.91□□□□□ -1.78
CHD1L-211ENST00000639534 KRTAP20-1Q3LI63 56 aa3.87□□□□□ -1.79
CHD1L-211ENST00000639534 MT4P47944 62 aa3.82□□□□□ -1.8
CHD1L-211ENST00000639534 KRTAP20-2Q3LI61 65 aa3.8□□□□□ -1.8
CHD1L-211ENST00000639534 KRTAP5-2Q701N4 177 aa3.75□□□□□ -1.81
CHD1L-211ENST00000639534 HMCN1Q96RW7 5635 aa3.58□□□□□ -1.84
CHD1L-211ENST00000639534 GPR98Q8WXG9 6306 aa3.54□□□□□ -1.84
CHD1L-211ENST00000639534 OBSCNQ5VST9 7968 aa3.48□□□□□ -1.85
CHD1L-211ENST00000639534 PRM1P04553 51 aa3.47□□□□□ -1.85
CHD1L-211ENST00000639534 LCE1EQ5T753 118 aa3.43□□□□□ -1.86
CHD1L-211ENST00000639534 KRTAP5-10Q6L8G5 202 aa3.19□□□□□ -1.9
CHD1L-211ENST00000639534 KRTAP5-1Q6L8H4 278 aa3.18□□□□□ -1.9
CHD1L-211ENST00000639534 LCE1CQ5T751 118 aa3.17□□□□□ -1.9
CHD1L-211ENST00000639534 LCE1BQ5T7P3 118 aa3.17□□□□□ -1.9
CHD1L-211ENST00000639534 LCE1FQ5T754 118 aa3.13□□□□□ -1.91
CHD1L-211ENST00000639534 KRTAP5-8O75690 187 aa3.11□□□□□ -1.91
CHD1L-211ENST00000639534 KRTAP5-7Q6L8G8 165 aa3.1□□□□□ -1.91
CHD1L-211ENST00000639534 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.1□□□□□ -1.91
CHD1L-211ENST00000639534 MUC5ACP98088 5654 aa3.09□□□□□ -1.91
CHD1L-211ENST00000639534 AHNAK2Q8IVF2 5795 aa3.08□□□□□ -1.92
CHD1L-211ENST00000639534 KRTAP5-11Q6L8G4 156 aa3.02□□□□□ -1.93
CHD1L-211ENST00000639534 KRTAP21-2Q3LI59 83 aa2.81□□□□□ -1.96
CHD1L-211ENST00000639534 AHNAKQ09666 5890 aaKnown RBP2.66□□□□□ -1.98
CHD1L-211ENST00000639534 MUC5BQ9HC84 5762 aaPredicted RBP2.63□□□□□ -1.99
CHD1L-211ENST00000639534 KRTAP4-4Q9BYR3 166 aa2.54□□□□□ -2
CHD1L-211ENST00000639534 PHGR1C9JFL3 82 aa2.36□□□□□ -2.03
CHD1L-211ENST00000639534 KRTAP21-1Q3LI58 79 aa2.19□□□□□ -2.06
CHD1L-211ENST00000639534 MUC19Q7Z5P9 8384 aa2.04□□□□□ -2.08
CHD1L-211ENST00000639534 MUC16Q8WXI7 14507 aa1.59□□□□□ -2.16
Retrieved 77 of 20,778 RNA–protein pairs in 5.4 ms