RNA–Protein interactions for RNA: ENST00000638685.1

PAX6-236, Transcript of paired box 6, humanhuman

TSL 5 BASIC

Gene PAX6, Length 2,372 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-236ENST00000638685 LCE3CQ5T5A8 94 aa3.76□□□□□ -1.81
PAX6-236ENST00000638685 MACF1Q9UPN3 7388 aaKnown RBP3.73□□□□□ -1.81
PAX6-236ENST00000638685 KRTAP4-12Q9BQ66 201 aa3.7□□□□□ -1.82
PAX6-236ENST00000638685 MT1EP04732 61 aa3.67□□□□□ -1.82
PAX6-236ENST00000638685 SYNE2Q8WXH0 6885 aaKnown RBP3.65□□□□□ -1.83
PAX6-236ENST00000638685 KRTAP4-7Q9BYR0 210 aa3.64□□□□□ -1.83
PAX6-236ENST00000638685 KRTAP9-7A8MTY7 169 aa3.63□□□□□ -1.83
PAX6-236ENST00000638685 INE1O15225 51 aa3.63□□□□□ -1.83
PAX6-236ENST00000638685 LCE4AQ5TA78 99 aa3.63□□□□□ -1.83
PAX6-236ENST00000638685 MDN1Q9NU22 5596 aa3.62□□□□□ -1.83
PAX6-236ENST00000638685 MT1LQ93083 61 aa3.62□□□□□ -1.83
PAX6-236ENST00000638685 CRCT1Q9UGL9 99 aa3.59□□□□□ -1.83
PAX6-236ENST00000638685 KRTAP9-9Q9BYP9 154 aa3.56□□□□□ -1.84
PAX6-236ENST00000638685 KRTAP9-4Q9BYQ2 154 aa3.56□□□□□ -1.84
PAX6-236ENST00000638685 DSTQ03001 7570 aaKnown RBP3.55□□□□□ -1.84
PAX6-236ENST00000638685 KRTAP9-6A8MVA2 160 aa3.55□□□□□ -1.84
PAX6-236ENST00000638685 LCE3BQ5TA77 95 aa3.55□□□□□ -1.84
PAX6-236ENST00000638685 KRTAP4-2Q9BYR5 136 aa3.53□□□□□ -1.84
PAX6-236ENST00000638685 SPRR2FQ96RM1 72 aa3.52□□□□□ -1.85
PAX6-236ENST00000638685 KRTAP4-3Q9BYR4 195 aa3.5□□□□□ -1.85
PAX6-236ENST00000638685 KRTAP19-3Q7Z4W3 81 aa3.48□□□□□ -1.85
PAX6-236ENST00000638685 KRTAP2-3P0C7H8 128 aa3.45□□□□□ -1.86
PAX6-236ENST00000638685 KRTAP2-4Q9BYR9 128 aa3.45□□□□□ -1.86
PAX6-236ENST00000638685 KRTAP2-1Q9BYU5 128 aa3.45□□□□□ -1.86
PAX6-236ENST00000638685 MT1MQ8N339 61 aa3.45□□□□□ -1.86
PAX6-236ENST00000638685 MT1GP13640 62 aa3.43□□□□□ -1.86
PAX6-236ENST00000638685 LCE5AQ5TCM9 118 aa3.42□□□□□ -1.86
PAX6-236ENST00000638685 KRTAP5-9P26371 169 aa3.39□□□□□ -1.87
PAX6-236ENST00000638685 LCE1AQ5T7P2 110 aa3.34□□□□□ -1.87
PAX6-236ENST00000638685 LCE1DQ5T752 114 aa3.33□□□□□ -1.88
PAX6-236ENST00000638685 KRTAP4-9Q9BYQ8 210 aa3.33□□□□□ -1.88
PAX6-236ENST00000638685 SPRR2EP22531 72 aa3.27□□□□□ -1.89
PAX6-236ENST00000638685 SPRR2BP35325 72 aa3.27□□□□□ -1.89
PAX6-236ENST00000638685 SPRR2AP35326 72 aa3.27□□□□□ -1.89
PAX6-236ENST00000638685 KRTAP6-3Q3LI67 103 aa3.23□□□□□ -1.89
PAX6-236ENST00000638685 SYNE1Q8NF91 8797 aaKnown RBP3.18□□□□□ -1.9
PAX6-236ENST00000638685 SPRR2DP22532 72 aa3.14□□□□□ -1.91
PAX6-236ENST00000638685 NEBP20929 6669 aa3.13□□□□□ -1.91
PAX6-236ENST00000638685 KRTAP4-11Q9BYQ6 195 aa3.13□□□□□ -1.91
PAX6-236ENST00000638685 KRTAP5-5Q701N2 237 aaPredicted RBP3.1□□□□□ -1.91
PAX6-236ENST00000638685 KRTAP6-1Q3LI64 71 aa3.09□□□□□ -1.92
PAX6-236ENST00000638685 HMCN1Q96RW7 5635 aa3.06□□□□□ -1.92
PAX6-236ENST00000638685 MT1AP04731 61 aa3.03□□□□□ -1.92
PAX6-236ENST00000638685 KRTAP12-4P60329 112 aa3.03□□□□□ -1.92
PAX6-236ENST00000638685 KRTAP20-1Q3LI63 56 aa2.94□□□□□ -1.94
PAX6-236ENST00000638685 OBSCNQ5VST9 7968 aa2.93□□□□□ -1.94
PAX6-236ENST00000638685 LCE3DQ9BYE3 92 aa2.89□□□□□ -1.95
PAX6-236ENST00000638685 KRTAP5-4Q6L8H1 288 aa2.87□□□□□ -1.95
PAX6-236ENST00000638685 LCE3EQ5T5B0 92 aa2.85□□□□□ -1.95
PAX6-236ENST00000638685 KRTAP6-2Q3LI66 62 aa2.81□□□□□ -1.96
PAX6-236ENST00000638685 MT3P25713 68 aa2.79□□□□□ -1.96
PAX6-236ENST00000638685 MT4P47944 62 aa2.79□□□□□ -1.96
PAX6-236ENST00000638685 KRTAP2-2Q9BYT5 123 aa2.75□□□□□ -1.97
PAX6-236ENST00000638685 KRTAP20-2Q3LI61 65 aa2.7□□□□□ -1.98
PAX6-236ENST00000638685 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.7□□□□□ -1.98
PAX6-236ENST00000638685 PRM1P04553 51 aa2.64□□□□□ -1.99
PAX6-236ENST00000638685 KRTAP5-2Q701N4 177 aa2.63□□□□□ -1.99
PAX6-236ENST00000638685 LCE1FQ5T754 118 aa2.61□□□□□ -1.99
PAX6-236ENST00000638685 GPR98Q8WXG9 6306 aa2.6□□□□□ -1.99
PAX6-236ENST00000638685 AHNAK2Q8IVF2 5795 aa2.4□□□□□ -2.02
PAX6-236ENST00000638685 MUC5ACP98088 5654 aa2.4□□□□□ -2.02
PAX6-236ENST00000638685 LCE1EQ5T753 118 aa2.37□□□□□ -2.03
PAX6-236ENST00000638685 KRTAP5-10Q6L8G5 202 aa2.31□□□□□ -2.04
PAX6-236ENST00000638685 KRTAP5-7Q6L8G8 165 aa2.31□□□□□ -2.04
PAX6-236ENST00000638685 KRTAP5-1Q6L8H4 278 aa2.29□□□□□ -2.04
PAX6-236ENST00000638685 LCE1BQ5T7P3 118 aa2.26□□□□□ -2.05
PAX6-236ENST00000638685 KRTAP4-4Q9BYR3 166 aa2.23□□□□□ -2.05
PAX6-236ENST00000638685 KRTAP5-8O75690 187 aa2.23□□□□□ -2.05
PAX6-236ENST00000638685 LCE1CQ5T751 118 aa2.17□□□□□ -2.06
PAX6-236ENST00000638685 MUC5BQ9HC84 5762 aaPredicted RBP2.12□□□□□ -2.07
PAX6-236ENST00000638685 KRTAP5-11Q6L8G4 156 aa2.12□□□□□ -2.07
PAX6-236ENST00000638685 AHNAKQ09666 5890 aaKnown RBP2.09□□□□□ -2.07
PAX6-236ENST00000638685 KRTAP21-2Q3LI59 83 aa2.01□□□□□ -2.09
PAX6-236ENST00000638685 MUC19Q7Z5P9 8384 aa1.82□□□□□ -2.12
PAX6-236ENST00000638685 KRTAP21-1Q3LI58 79 aa1.68□□□□□ -2.14
PAX6-236ENST00000638685 PHGR1C9JFL3 82 aa1.65□□□□□ -2.14
PAX6-236ENST00000638685 MUC16Q8WXI7 14507 aa1.09□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 169.7 ms