RNA–Protein interactions for RNA: ENST00000637941.1

TCF4-289, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 2,115 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-289ENST00000637941 KMT2DO14686 5537 aa4.47□□□□□ -1.69
TCF4-289ENST00000637941 KRTAP9-6A8MVA2 160 aa4.42□□□□□ -1.7
TCF4-289ENST00000637941 KRTAP9-4Q9BYQ2 154 aa4.42□□□□□ -1.7
TCF4-289ENST00000637941 KRTAP9-7A8MTY7 169 aa4.42□□□□□ -1.7
TCF4-289ENST00000637941 MT1EP04732 61 aa4.41□□□□□ -1.7
TCF4-289ENST00000637941 MT1LQ93083 61 aa4.41□□□□□ -1.7
TCF4-289ENST00000637941 LCE4AQ5TA78 99 aa4.39□□□□□ -1.71
TCF4-289ENST00000637941 KRTAP2-3P0C7H8 128 aa4.38□□□□□ -1.71
TCF4-289ENST00000637941 KRTAP2-4Q9BYR9 128 aa4.38□□□□□ -1.71
TCF4-289ENST00000637941 KRTAP2-1Q9BYU5 128 aa4.38□□□□□ -1.71
TCF4-289ENST00000637941 KRTAP9-9Q9BYP9 154 aa4.37□□□□□ -1.71
TCF4-289ENST00000637941 FSIP2Q5CZC0 6907 aa4.37□□□□□ -1.71
TCF4-289ENST00000637941 KRTAP4-7Q9BYR0 210 aa4.33□□□□□ -1.72
TCF4-289ENST00000637941 FCGBPQ9Y6R7 5405 aaPredicted RBP4.29□□□□□ -1.72
TCF4-289ENST00000637941 LCE5AQ5TCM9 118 aa4.27□□□□□ -1.73
TCF4-289ENST00000637941 LCE1DQ5T752 114 aa4.24□□□□□ -1.73
TCF4-289ENST00000637941 KRTAP5-3Q6L8H2 238 aa4.16□□□□□ -1.74
TCF4-289ENST00000637941 MT1GP13640 62 aa4.16□□□□□ -1.74
TCF4-289ENST00000637941 KRTAP19-3Q7Z4W3 81 aa4.14□□□□□ -1.75
TCF4-289ENST00000637941 CRCT1Q9UGL9 99 aa4.13□□□□□ -1.75
TCF4-289ENST00000637941 MT1MQ8N339 61 aa4.12□□□□□ -1.75
TCF4-289ENST00000637941 KRTAP4-9Q9BYQ8 210 aa4.1□□□□□ -1.75
TCF4-289ENST00000637941 SPRR2FQ96RM1 72 aa4.07□□□□□ -1.76
TCF4-289ENST00000637941 MUC12Q9UKN1 5478 aa4.05□□□□□ -1.76
TCF4-289ENST00000637941 KRTAP4-3Q9BYR4 195 aa4.05□□□□□ -1.76
TCF4-289ENST00000637941 MACF1Q9UPN3 7388 aaKnown RBP4.05□□□□□ -1.76
TCF4-289ENST00000637941 KRTAP4-2Q9BYR5 136 aa3.96□□□□□ -1.78
TCF4-289ENST00000637941 KRTAP4-11Q9BYQ6 195 aa3.95□□□□□ -1.78
TCF4-289ENST00000637941 KRTAP5-9P26371 169 aa3.93□□□□□ -1.78
TCF4-289ENST00000637941 SYNE2Q8WXH0 6885 aaKnown RBP3.91□□□□□ -1.78
TCF4-289ENST00000637941 KRTAP12-4P60329 112 aa3.85□□□□□ -1.79
TCF4-289ENST00000637941 LCE1AQ5T7P2 110 aa3.85□□□□□ -1.79
TCF4-289ENST00000637941 SPRR2EP22531 72 aa3.82□□□□□ -1.8
TCF4-289ENST00000637941 SPRR2BP35325 72 aa3.82□□□□□ -1.8
TCF4-289ENST00000637941 SPRR2AP35326 72 aa3.82□□□□□ -1.8
TCF4-289ENST00000637941 MDN1Q9NU22 5596 aa3.81□□□□□ -1.8
TCF4-289ENST00000637941 MT1AP04731 61 aa3.79□□□□□ -1.8
TCF4-289ENST00000637941 KRTAP6-3Q3LI67 103 aa3.78□□□□□ -1.8
TCF4-289ENST00000637941 DSTQ03001 7570 aaKnown RBP3.71□□□□□ -1.82
TCF4-289ENST00000637941 KRTAP6-1Q3LI64 71 aa3.7□□□□□ -1.82
TCF4-289ENST00000637941 SPRR2DP22532 72 aa3.67□□□□□ -1.82
TCF4-289ENST00000637941 LCE3DQ9BYE3 92 aa3.64□□□□□ -1.83
TCF4-289ENST00000637941 KRTAP5-5Q701N2 237 aaPredicted RBP3.63□□□□□ -1.83
TCF4-289ENST00000637941 LCE1FQ5T754 118 aa3.62□□□□□ -1.83
TCF4-289ENST00000637941 LCE3EQ5T5B0 92 aa3.61□□□□□ -1.83
TCF4-289ENST00000637941 MT3P25713 68 aa3.6□□□□□ -1.83
TCF4-289ENST00000637941 KRTAP2-2Q9BYT5 123 aa3.52□□□□□ -1.85
TCF4-289ENST00000637941 NEBP20929 6669 aa3.48□□□□□ -1.85
TCF4-289ENST00000637941 SYNE1Q8NF91 8797 aaKnown RBP3.46□□□□□ -1.86
TCF4-289ENST00000637941 PRM1P04553 51 aa3.4□□□□□ -1.87
TCF4-289ENST00000637941 KRTAP6-2Q3LI66 62 aa3.32□□□□□ -1.88
TCF4-289ENST00000637941 KRTAP5-4Q6L8H1 288 aa3.32□□□□□ -1.88
TCF4-289ENST00000637941 MT4P47944 62 aa3.19□□□□□ -1.9
TCF4-289ENST00000637941 KRTAP20-1Q3LI63 56 aa3.15□□□□□ -1.91
TCF4-289ENST00000637941 KRTAP20-2Q3LI61 65 aa3.12□□□□□ -1.91
TCF4-289ENST00000637941 KRTAP5-2Q701N4 177 aa3.05□□□□□ -1.92
TCF4-289ENST00000637941 LCE1EQ5T753 118 aa3.04□□□□□ -1.92
TCF4-289ENST00000637941 HMCN1Q96RW7 5635 aa3.04□□□□□ -1.92
TCF4-289ENST00000637941 GPR98Q8WXG9 6306 aa2.98□□□□□ -1.93
TCF4-289ENST00000637941 OBSCNQ5VST9 7968 aa2.97□□□□□ -1.93
TCF4-289ENST00000637941 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.95□□□□□ -1.94
TCF4-289ENST00000637941 MUC5ACP98088 5654 aa2.67□□□□□ -1.98
TCF4-289ENST00000637941 LCE1BQ5T7P3 118 aa2.65□□□□□ -1.98
TCF4-289ENST00000637941 KRTAP5-11Q6L8G4 156 aa2.63□□□□□ -1.99
TCF4-289ENST00000637941 KRTAP5-10Q6L8G5 202 aa2.63□□□□□ -1.99
TCF4-289ENST00000637941 KRTAP5-1Q6L8H4 278 aa2.62□□□□□ -1.99
TCF4-289ENST00000637941 AHNAK2Q8IVF2 5795 aa2.61□□□□□ -1.99
TCF4-289ENST00000637941 LCE1CQ5T751 118 aa2.61□□□□□ -1.99
TCF4-289ENST00000637941 KRTAP5-8O75690 187 aa2.54□□□□□ -2
TCF4-289ENST00000637941 KRTAP5-7Q6L8G8 165 aa2.49□□□□□ -2.01
TCF4-289ENST00000637941 MUC5BQ9HC84 5762 aaPredicted RBP2.45□□□□□ -2.02
TCF4-289ENST00000637941 AHNAKQ09666 5890 aaKnown RBP2.44□□□□□ -2.02
TCF4-289ENST00000637941 KRTAP21-2Q3LI59 83 aa2.39□□□□□ -2.03
TCF4-289ENST00000637941 KRTAP4-4Q9BYR3 166 aa2.34□□□□□ -2.03
TCF4-289ENST00000637941 KRTAP21-1Q3LI58 79 aa2.17□□□□□ -2.06
TCF4-289ENST00000637941 PHGR1C9JFL3 82 aa1.93□□□□□ -2.1
TCF4-289ENST00000637941 MUC19Q7Z5P9 8384 aa1.84□□□□□ -2.12
TCF4-289ENST00000637941 MUC16Q8WXI7 14507 aa1.31□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 93.5 ms