RNA–Protein interactions for RNA: ENST00000637540.1

SCN8A-213, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 5

Gene SCN8A, Length 93 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-213ENST00000637540 KRTAP19-3Q7Z4W3 81 aa1.64□□□□□ -2.15
SCN8A-213ENST00000637540 MUC12Q9UKN1 5478 aa1.63□□□□□ -2.15
SCN8A-213ENST00000637540 MT1GP13640 62 aa1.63□□□□□ -2.15
SCN8A-213ENST00000637540 MT1MQ8N339 61 aa1.63□□□□□ -2.15
SCN8A-213ENST00000637540 LUZP6Q538Z0 58 aa1.62□□□□□ -2.15
SCN8A-213ENST00000637540 KRTAP4-3Q9BYR4 195 aa1.61□□□□□ -2.15
SCN8A-213ENST00000637540 SPRR2FQ96RM1 72 aa1.6□□□□□ -2.15
SCN8A-213ENST00000637540 LCE1AQ5T7P2 110 aa1.59□□□□□ -2.15
SCN8A-213ENST00000637540 MACF1Q9UPN3 7388 aaKnown RBP1.57□□□□□ -2.16
SCN8A-213ENST00000637540 H3BS24 57 aa1.57□□□□□ -2.16
SCN8A-213ENST00000637540 KRTAP2-3P0C7H8 128 aa1.57□□□□□ -2.16
SCN8A-213ENST00000637540 KRTAP2-4Q9BYR9 128 aa1.57□□□□□ -2.16
SCN8A-213ENST00000637540 KRTAP2-1Q9BYU5 128 aa1.57□□□□□ -2.16
SCN8A-213ENST00000637540 LOC100996750A0A140TA64 210 aa1.56□□□□□ -2.16
SCN8A-213ENST00000637540 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.56□□□□□ -2.16
SCN8A-213ENST00000637540 KRTAP6-3Q3LI67 103 aa1.56□□□□□ -2.16
SCN8A-213ENST00000637540 KRTAP9-6A0A140TA67 174 aa1.55□□□□□ -2.16
SCN8A-213ENST00000637540 MDN1Q9NU22 5596 aa1.52□□□□□ -2.17
SCN8A-213ENST00000637540 SYNE2Q8WXH0 6885 aaKnown RBP1.51□□□□□ -2.17
SCN8A-213ENST00000637540 SPRR2EP22531 72 aa1.5□□□□□ -2.17
SCN8A-213ENST00000637540 SPRR2BP35325 72 aa1.5□□□□□ -2.17
SCN8A-213ENST00000637540 SPRR2AP35326 72 aa1.5□□□□□ -2.17
SCN8A-213ENST00000637540 KRTAP5-5Q701N2 237 aaPredicted RBP1.5□□□□□ -2.17
SCN8A-213ENST00000637540 A0A0A0MQY5 61 aa1.45□□□□□ -2.18
SCN8A-213ENST00000637540 MT1AP04731 61 aa1.45□□□□□ -2.18
SCN8A-213ENST00000637540 KRTAP6-1Q3LI64 71 aa1.45□□□□□ -2.18
SCN8A-213ENST00000637540 KRTAP9-7A8MTY7 169 aa1.44□□□□□ -2.18
SCN8A-213ENST00000637540 DSTQ03001 7570 aaKnown RBP1.44□□□□□ -2.18
SCN8A-213ENST00000637540 SPRR2DP22532 72 aa1.43□□□□□ -2.18
SCN8A-213ENST00000637540 KRTAP5-4Q6L8H1 288 aa1.41□□□□□ -2.18
SCN8A-213ENST00000637540 SYNE1Q8NF91 8797 aaKnown RBP1.41□□□□□ -2.18
SCN8A-213ENST00000637540 INE1O15225 51 aa1.4□□□□□ -2.19
SCN8A-213ENST00000637540 LCE3BQ5TA77 95 aa1.4□□□□□ -2.19
SCN8A-213ENST00000637540 NEBP20929 6669 aa1.38□□□□□ -2.19
SCN8A-213ENST00000637540 KRTAP9-4Q9BYQ2 154 aa1.37□□□□□ -2.19
SCN8A-213ENST00000637540 KRTAP4-9Q9BYQ8 210 aa1.34□□□□□ -2.19
SCN8A-213ENST00000637540 LCE4AQ5TA78 99 aa1.31□□□□□ -2.2
SCN8A-213ENST00000637540 KRTAP6-2Q3LI66 62 aa1.3□□□□□ -2.2
SCN8A-213ENST00000637540 KRTAP5-2Q701N4 177 aa1.3□□□□□ -2.2
SCN8A-213ENST00000637540 KRTAP4-6Q9BYQ5 205 aa1.3□□□□□ -2.2
SCN8A-213ENST00000637540 KRTAP2-2Q9BYT5 123 aa1.3□□□□□ -2.2
SCN8A-213ENST00000637540 MT3P25713 68 aa1.28□□□□□ -2.2
SCN8A-213ENST00000637540 KRTAP12-4P60329 112 aa1.28□□□□□ -2.2
SCN8A-213ENST00000637540 KRTAP20-2Q3LI61 65 aa1.28□□□□□ -2.2
SCN8A-213ENST00000637540 KRTAP5-3Q6L8H2 238 aa1.27□□□□□ -2.21
SCN8A-213ENST00000637540 LCE3DQ9BYE3 92 aa1.27□□□□□ -2.21
SCN8A-213ENST00000637540 KRTAP20-1Q3LI63 56 aa1.26□□□□□ -2.21
SCN8A-213ENST00000637540 LCE1DQ5T752 114 aa1.25□□□□□ -2.21
SCN8A-213ENST00000637540 MT4P47944 62 aa1.24□□□□□ -2.21
SCN8A-213ENST00000637540 LCE3EQ5T5B0 92 aa1.24□□□□□ -2.21
SCN8A-213ENST00000637540 HMCN1Q96RW7 5635 aa1.24□□□□□ -2.21
SCN8A-213ENST00000637540 OBSCNQ5VST9 7968 aa1.16□□□□□ -2.22
SCN8A-213ENST00000637540 LCE1EQ5T753 118 aa1.13□□□□□ -2.23
SCN8A-213ENST00000637540 PRM1P04553 51 aa1.11□□□□□ -2.23
SCN8A-213ENST00000637540 KRTAP5-10Q6L8G5 202 aa1.1□□□□□ -2.23
SCN8A-213ENST00000637540 KRTAP5-1Q6L8H4 278 aa1.1□□□□□ -2.23
SCN8A-213ENST00000637540 KRTAP5-7Q6L8G8 165 aa1.08□□□□□ -2.24
SCN8A-213ENST00000637540 KRTAP4-11Q9BYQ6 195 aa1.08□□□□□ -2.24
SCN8A-213ENST00000637540 KRTAP4-2Q9BYR5 136 aa1.08□□□□□ -2.24
SCN8A-213ENST00000637540 AHNAK2Q8IVF2 5795 aa1.08□□□□□ -2.24
SCN8A-213ENST00000637540 MUC5ACP98088 5654 aa1.08□□□□□ -2.24
SCN8A-213ENST00000637540 KRTAP5-8O75690 187 aa1.07□□□□□ -2.24
SCN8A-213ENST00000637540 LCE1CQ5T751 118 aa1.05□□□□□ -2.24
SCN8A-213ENST00000637540 LCE1BQ5T7P3 118 aa1.05□□□□□ -2.24
SCN8A-213ENST00000637540 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.02□□□□□ -2.25
SCN8A-213ENST00000637540 KRTAP21-2Q3LI59 83 aa0.97□□□□□ -2.25
SCN8A-213ENST00000637540 KRTAP5-11Q6L8G4 156 aa0.93□□□□□ -2.26
SCN8A-213ENST00000637540 MUC5BQ9HC84 5762 aaPredicted RBP0.91□□□□□ -2.26
SCN8A-213ENST00000637540 KRTAP9-9Q9BYP9 154 aa0.88□□□□□ -2.27
SCN8A-213ENST00000637540 GPR98Q8WXG9 6306 aa0.85□□□□□ -2.27
SCN8A-213ENST00000637540 KRTAP4-12Q9BQ66 201 aa0.83□□□□□ -2.28
SCN8A-213ENST00000637540 LCE1FQ5T754 118 aa0.81□□□□□ -2.28
SCN8A-213ENST00000637540 KRTAP4-4Q9BYR3 166 aa0.81□□□□□ -2.28
SCN8A-213ENST00000637540 PHGR1C9JFL3 82 aa0.79□□□□□ -2.28
SCN8A-213ENST00000637540 AHNAKQ09666 5890 aaKnown RBP0.76□□□□□ -2.29
SCN8A-213ENST00000637540 KRTAP21-1Q3LI58 79 aa0.73□□□□□ -2.29
SCN8A-213ENST00000637540 MUC19Q7Z5P9 8384 aa0.69□□□□□ -2.3
SCN8A-213ENST00000637540 MUC16Q8WXI7 14507 aa0.63□□□□□ -2.31
Retrieved 78 of 20,778 RNA–protein pairs in 73.1 ms