RNA–Protein interactions for RNA: ENST00000637325.1

PNKP-228, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 100 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-228ENST00000637325 KRTAP4-9Q9BYQ8 210 aa4.85□□□□□ -1.63
PNKP-228ENST00000637325 K7ERS5 55 aa4.8□□□□□ -1.64
PNKP-228ENST00000637325 V9GYY9 64 aa4.8□□□□□ -1.64
PNKP-228ENST00000637325 KRTAP12-3P60328 96 aa4.78□□□□□ -1.64
PNKP-228ENST00000637325 KRTAP4-3Q9BYR4 195 aa4.77□□□□□ -1.65
PNKP-228ENST00000637325 PSPHP1O15172 72 aa4.76□□□□□ -1.65
PNKP-228ENST00000637325 KRTAP25-1Q3LHN0 102 aa4.74□□□□□ -1.65
PNKP-228ENST00000637325 LCE4AQ5TA78 99 aa4.74□□□□□ -1.65
PNKP-228ENST00000637325 LCE1DQ5T752 114 aa4.73□□□□□ -1.65
PNKP-228ENST00000637325 GPR98Q8WXG9 6306 aa4.73□□□□□ -1.65
PNKP-228ENST00000637325 Q1T7F1 81 aa4.72□□□□□ -1.65
PNKP-228ENST00000637325 MT4P47944 62 aa4.71□□□□□ -1.66
PNKP-228ENST00000637325 KRTAP4-7Q9BYR0 210 aa4.67□□□□□ -1.66
PNKP-228ENST00000637325 HMCN1Q96RW7 5635 aa4.66□□□□□ -1.66
PNKP-228ENST00000637325 A6NED7 52 aa4.62□□□□□ -1.67
PNKP-228ENST00000637325 KRTAP5-4Q6L8H1 288 aa4.62□□□□□ -1.67
PNKP-228ENST00000637325 AHNAK2Q8IVF2 5795 aa4.55□□□□□ -1.68
PNKP-228ENST00000637325 KRTAP23-1A1A580 65 aa4.55□□□□□ -1.68
PNKP-228ENST00000637325 KRTAP4-6Q9BYQ5 205 aa4.55□□□□□ -1.68
PNKP-228ENST00000637325 CDC42SE1Q9NRR8 79 aa4.52□□□□□ -1.69
PNKP-228ENST00000637325 KRTAP19-4Q3LI73 84 aa4.51□□□□□ -1.69
PNKP-228ENST00000637325 KRTAP15-1Q3LI76 137 aa4.48□□□□□ -1.69
PNKP-228ENST00000637325 RPS28P62857 69 aaKnown RBP4.47□□□□□ -1.69
PNKP-228ENST00000637325 KRTAP5-5Q701N2 237 aaPredicted RBP4.45□□□□□ -1.7
PNKP-228ENST00000637325 LOC100996750A0A140TA64 210 aa4.43□□□□□ -1.7
PNKP-228ENST00000637325 ROMO1P60602 79 aa4.43□□□□□ -1.7
PNKP-228ENST00000637325 PCP4P48539 62 aa4.4□□□□□ -1.71
PNKP-228ENST00000637325 KRTAP12-4P60329 112 aa4.4□□□□□ -1.71
PNKP-228ENST00000637325 LCE3CQ5T5A8 94 aa4.4□□□□□ -1.71
PNKP-228ENST00000637325 KRTAP20-2Q3LI61 65 aa4.38□□□□□ -1.71
PNKP-228ENST00000637325 SPRR5A0A1B0GTR4 108 aa4.37□□□□□ -1.71
PNKP-228ENST00000637325 KRTAP5-10Q6L8G5 202 aa4.36□□□□□ -1.71
PNKP-228ENST00000637325 SYNE1Q8NF91 8797 aaKnown RBP4.28□□□□□ -1.72
PNKP-228ENST00000637325 KRTAP5-3Q6L8H2 238 aa4.28□□□□□ -1.72
PNKP-228ENST00000637325 KRTAP5-7Q6L8G8 165 aa4.2□□□□□ -1.74
PNKP-228ENST00000637325 MT1AP04731 61 aa4.18□□□□□ -1.74
PNKP-228ENST00000637325 KRTAP6-1Q3LI64 71 aa4.15□□□□□ -1.75
PNKP-228ENST00000637325 KRTAP9-6A8MVA2 160 aa4.11□□□□□ -1.75
PNKP-228ENST00000637325 KRTAP5-2Q701N4 177 aa4.05□□□□□ -1.76
PNKP-228ENST00000637325 KRTAP9-4Q9BYQ2 154 aa4.05□□□□□ -1.76
PNKP-228ENST00000637325 KRTAP4-11Q9BYQ6 195 aa4□□□□□ -1.77
PNKP-228ENST00000637325 KRTAP6-2Q3LI66 62 aa3.97□□□□□ -1.77
PNKP-228ENST00000637325 BRK1Q8WUW1 75 aa3.96□□□□□ -1.78
PNKP-228ENST00000637325 KRTAP5-8O75690 187 aa3.84□□□□□ -1.79
PNKP-228ENST00000637325 MT3P25713 68 aa3.84□□□□□ -1.79
PNKP-228ENST00000637325 OBSCNQ5VST9 7968 aa3.74□□□□□ -1.81
PNKP-228ENST00000637325 AHNAKQ09666 5890 aaKnown RBP3.74□□□□□ -1.81
PNKP-228ENST00000637325 PMAIP1Q13794 54 aa3.72□□□□□ -1.81
PNKP-228ENST00000637325 MUC5BQ9HC84 5762 aaPredicted RBP3.7□□□□□ -1.82
PNKP-228ENST00000637325 KRTAP9-9Q9BYP9 154 aa3.7□□□□□ -1.82
PNKP-228ENST00000637325 MUC5ACP98088 5654 aa3.67□□□□□ -1.82
PNKP-228ENST00000637325 KRTAP5-1Q6L8H4 278 aa3.63□□□□□ -1.83
PNKP-228ENST00000637325 PRAC1Q96KF2 57 aa3.58□□□□□ -1.84
PNKP-228ENST00000637325 LCE1EQ5T753 118 aa3.5□□□□□ -1.85
PNKP-228ENST00000637325 PRO0628Q9UI54 55 aa3.4□□□□□ -1.87
PNKP-228ENST00000637325 LCE1BQ5T7P3 118 aa3.34□□□□□ -1.87
PNKP-228ENST00000637325 KRTAP4-2Q9BYR5 136 aa3.29□□□□□ -1.88
PNKP-228ENST00000637325 KTN1-AS1Q86SY8 53 aa3.27□□□□□ -1.89
PNKP-228ENST00000637325 LCE1CQ5T751 118 aa3.24□□□□□ -1.89
PNKP-228ENST00000637325 SVIPQ8NHG7 77 aa3.19□□□□□ -1.9
PNKP-228ENST00000637325 LCE3DQ9BYE3 92 aa3.19□□□□□ -1.9
PNKP-228ENST00000637325 LUZP6Q538Z0 58 aa3.08□□□□□ -1.92
PNKP-228ENST00000637325 LCE3EQ5T5B0 92 aa3.01□□□□□ -1.93
PNKP-228ENST00000637325 KRTAP4-12Q9BQ66 201 aa3.01□□□□□ -1.93
PNKP-228ENST00000637325 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.94□□□□□ -1.94
PNKP-228ENST00000637325 KRTAP5-11Q6L8G4 156 aa2.93□□□□□ -1.94
PNKP-228ENST00000637325 LCE1FQ5T754 118 aa2.86□□□□□ -1.95
PNKP-228ENST00000637325 KRTAP21-2Q3LI59 83 aa2.72□□□□□ -1.97
PNKP-228ENST00000637325 PHGR1C9JFL3 82 aa2.57□□□□□ -2
PNKP-228ENST00000637325 KRTAP4-4Q9BYR3 166 aa2.52□□□□□ -2.01
PNKP-228ENST00000637325 NDUFAF8A1L188 74 aa2.4□□□□□ -2.03
PNKP-228ENST00000637325 MUC19Q7Z5P9 8384 aa2.32□□□□□ -2.04
PNKP-228ENST00000637325 PRM1P04553 51 aa2.27□□□□□ -2.05
PNKP-228ENST00000637325 KRTAP21-1Q3LI58 79 aa1.95□□□□□ -2.1
PNKP-228ENST00000637325 INE1O15225 51 aa1.92□□□□□ -2.1
PNKP-228ENST00000637325 A0A0A0MQY5 61 aa1.89□□□□□ -2.11
PNKP-228ENST00000637325 MUC16Q8WXI7 14507 aa1.67□□□□□ -2.14
PNKP-228ENST00000637325 H3BS24 57 aa0.66□□□□□ -2.3
Retrieved 78 of 20,778 RNA–protein pairs in 115.3 ms