RNA–Protein interactions for RNA: ENST00000636767.1

CLN5-215, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 2,368 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-215ENST00000636767 MT1EP04732 61 aa7.38□□□□□ -1.23
CLN5-215ENST00000636767 KRTAP19-6Q3LI70 58 aa7.16□□□□□ -1.26
CLN5-215ENST00000636767 FCGBPQ9Y6R7 5405 aaPredicted RBP7.09□□□□□ -1.28
CLN5-215ENST00000636767 LOC100996750A0A140TA64 210 aa7.02□□□□□ -1.29
CLN5-215ENST00000636767 KRTAP4-3Q9BYR4 195 aa7.01□□□□□ -1.29
CLN5-215ENST00000636767 MT1GP13640 62 aa6.93□□□□□ -1.3
CLN5-215ENST00000636767 MT1MQ8N339 61 aa6.88□□□□□ -1.31
CLN5-215ENST00000636767 MUC12Q9UKN1 5478 aa6.85□□□□□ -1.31
CLN5-215ENST00000636767 KRTAP19-3Q7Z4W3 81 aa6.83□□□□□ -1.32
CLN5-215ENST00000636767 CRCT1Q9UGL9 99 aa6.76□□□□□ -1.33
CLN5-215ENST00000636767 KRTAP9-2Q9BYQ4 174 aa6.76□□□□□ -1.33
CLN5-215ENST00000636767 MACF1Q9UPN3 7388 aaKnown RBP6.76□□□□□ -1.33
CLN5-215ENST00000636767 KRTAP12-4P60329 112 aa6.65□□□□□ -1.34
CLN5-215ENST00000636767 SYNE2Q8WXH0 6885 aaKnown RBP6.6□□□□□ -1.35
CLN5-215ENST00000636767 LCE5AQ5TCM9 118 aa6.58□□□□□ -1.36
CLN5-215ENST00000636767 KRTAP4-6Q9BYQ5 205 aa6.54□□□□□ -1.36
CLN5-215ENST00000636767 SPRR2FQ96RM1 72 aa6.5□□□□□ -1.37
CLN5-215ENST00000636767 LCE3BQ5TA77 95 aa6.46□□□□□ -1.37
CLN5-215ENST00000636767 DSTQ03001 7570 aaKnown RBP6.45□□□□□ -1.38
CLN5-215ENST00000636767 MDN1Q9NU22 5596 aa6.44□□□□□ -1.38
CLN5-215ENST00000636767 KRTAP4-9Q9BYQ8 210 aa6.38□□□□□ -1.39
CLN5-215ENST00000636767 MT1AP04731 61 aa6.3□□□□□ -1.4
CLN5-215ENST00000636767 KRTAP6-1Q3LI64 71 aa6.3□□□□□ -1.4
CLN5-215ENST00000636767 KRTAP5-9P26371 169 aa6.21□□□□□ -1.42
CLN5-215ENST00000636767 SYNE1Q8NF91 8797 aaKnown RBP6.18□□□□□ -1.42
CLN5-215ENST00000636767 LCE1AQ5T7P2 110 aa6.15□□□□□ -1.43
CLN5-215ENST00000636767 LCE3DQ9BYE3 92 aa6.14□□□□□ -1.43
CLN5-215ENST00000636767 LCE3EQ5T5B0 92 aa6.08□□□□□ -1.44
CLN5-215ENST00000636767 KRTAP5-5Q701N2 237 aaPredicted RBP6.06□□□□□ -1.44
CLN5-215ENST00000636767 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.06□□□□□ -1.44
CLN5-215ENST00000636767 SPRR2EP22531 72 aa6.04□□□□□ -1.44
CLN5-215ENST00000636767 SPRR2BP35325 72 aa6.04□□□□□ -1.44
CLN5-215ENST00000636767 SPRR2AP35326 72 aa6.04□□□□□ -1.44
CLN5-215ENST00000636767 KRTAP9-6A0A140TA67 174 aa6.02□□□□□ -1.45
CLN5-215ENST00000636767 KRTAP9-7A8MTY7 169 aa6□□□□□ -1.45
CLN5-215ENST00000636767 PRM1P04553 51 aa5.93□□□□□ -1.46
CLN5-215ENST00000636767 KRTAP6-3Q3LI67 103 aa5.89□□□□□ -1.47
CLN5-215ENST00000636767 KRTAP9-4Q9BYQ2 154 aa5.81□□□□□ -1.48
CLN5-215ENST00000636767 SPRR2DP22532 72 aa5.78□□□□□ -1.48
CLN5-215ENST00000636767 KRTAP6-2Q3LI66 62 aa5.71□□□□□ -1.5
CLN5-215ENST00000636767 NEBP20929 6669 aa5.62□□□□□ -1.51
CLN5-215ENST00000636767 MT3P25713 68 aa5.54□□□□□ -1.52
CLN5-215ENST00000636767 OBSCNQ5VST9 7968 aa5.38□□□□□ -1.55
CLN5-215ENST00000636767 KRTAP9-9Q9BYP9 154 aa5.31□□□□□ -1.56
CLN5-215ENST00000636767 KRTAP4-12Q9BQ66 201 aa5.27□□□□□ -1.57
CLN5-215ENST00000636767 KRTAP5-4Q6L8H1 288 aa5.26□□□□□ -1.57
CLN5-215ENST00000636767 KRTAP2-2Q9BYT5 123 aa5.23□□□□□ -1.57
CLN5-215ENST00000636767 MT4P47944 62 aa5.14□□□□□ -1.59
CLN5-215ENST00000636767 LCE1DQ5T752 114 aa5.14□□□□□ -1.59
CLN5-215ENST00000636767 HMCN1Q96RW7 5635 aa5.04□□□□□ -1.6
CLN5-215ENST00000636767 KRTAP4-2Q9BYR5 136 aa5.01□□□□□ -1.61
CLN5-215ENST00000636767 LCE4AQ5TA78 99 aa4.98□□□□□ -1.61
CLN5-215ENST00000636767 KRTAP20-2Q3LI61 65 aa4.97□□□□□ -1.61
CLN5-215ENST00000636767 KRTAP5-2Q701N4 177 aa4.91□□□□□ -1.62
CLN5-215ENST00000636767 KRTAP20-1Q3LI63 56 aa4.91□□□□□ -1.62
CLN5-215ENST00000636767 KRTAP5-3Q6L8H2 238 aa4.9□□□□□ -1.62
CLN5-215ENST00000636767 KRTAP4-11Q9BYQ6 195 aa4.75□□□□□ -1.65
CLN5-215ENST00000636767 MUC5ACP98088 5654 aa4.73□□□□□ -1.65
CLN5-215ENST00000636767 KRTAP5-10Q6L8G5 202 aa4.49□□□□□ -1.69
CLN5-215ENST00000636767 LCE1EQ5T753 118 aa4.46□□□□□ -1.7
CLN5-215ENST00000636767 LCE1BQ5T7P3 118 aa4.45□□□□□ -1.7
CLN5-215ENST00000636767 KRTAP5-1Q6L8H4 278 aa4.41□□□□□ -1.7
CLN5-215ENST00000636767 LCE1CQ5T751 118 aa4.23□□□□□ -1.73
CLN5-215ENST00000636767 AHNAK2Q8IVF2 5795 aa4.21□□□□□ -1.73
CLN5-215ENST00000636767 KRTAP5-8O75690 187 aa4.07□□□□□ -1.76
CLN5-215ENST00000636767 KRTAP21-2Q3LI59 83 aa4.05□□□□□ -1.76
CLN5-215ENST00000636767 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.02□□□□□ -1.77
CLN5-215ENST00000636767 KRTAP5-7Q6L8G8 165 aa3.88□□□□□ -1.79
CLN5-215ENST00000636767 KRTAP21-1Q3LI58 79 aa3.75□□□□□ -1.81
CLN5-215ENST00000636767 MUC5BQ9HC84 5762 aaPredicted RBP3.74□□□□□ -1.81
CLN5-215ENST00000636767 KRTAP4-4Q9BYR3 166 aa3.71□□□□□ -1.82
CLN5-215ENST00000636767 GPR98Q8WXG9 6306 aa3.68□□□□□ -1.82
CLN5-215ENST00000636767 KRTAP5-11Q6L8G4 156 aa3.62□□□□□ -1.83
CLN5-215ENST00000636767 MUC19Q7Z5P9 8384 aa3.51□□□□□ -1.85
CLN5-215ENST00000636767 PHGR1C9JFL3 82 aa3.14□□□□□ -1.91
CLN5-215ENST00000636767 AHNAKQ09666 5890 aaKnown RBP2.98□□□□□ -1.93
CLN5-215ENST00000636767 LCE1FQ5T754 118 aa2.95□□□□□ -1.94
CLN5-215ENST00000636767 MUC16Q8WXI7 14507 aa2.13□□□□□ -2.07
Retrieved 78 of 20,778 RNA–protein pairs in 95.7 ms