RNA–Protein interactions for RNA: ENST00000636398.1

EFHC1-220, Transcript of EF-hand domain containing 1, humanhuman

TSL 5

Gene EFHC1, Length 1,703 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFHC1-220ENST00000636398 UBR4Q5T4S7 5183 aa0.95□□□□□ -2.26
EFHC1-220ENST00000636398 RPL39P62891 51 aaKnown RBP0.95□□□□□ -2.26
EFHC1-220ENST00000636398 S4R3F8 94 aa0.95□□□□□ -2.26
EFHC1-220ENST00000636398 VPS13BQ7Z7G8 4022 aa0.94□□□□□ -2.26
EFHC1-220ENST00000636398 IGLV5-48A0A075B6I7 105 aa0.92□□□□□ -2.26
EFHC1-220ENST00000636398 SPINK1P00995 79 aa0.92□□□□□ -2.26
EFHC1-220ENST00000636398 POLR2KP53803 58 aaKnown RBP0.92□□□□□ -2.26
EFHC1-220ENST00000636398 FAT3Q8TDW7 4589 aa0.92□□□□□ -2.26
EFHC1-220ENST00000636398 PRLHP81277 87 aa0.92□□□□□ -2.26
EFHC1-220ENST00000636398 RNF213Q63HN8 5207 aa0.92□□□□□ -2.26
EFHC1-220ENST00000636398 LRP2P98164 4655 aa0.92□□□□□ -2.26
EFHC1-220ENST00000636398 AHNAK2Q8IVF2 5795 aa0.91□□□□□ -2.26
EFHC1-220ENST00000636398 HMCN2Q8NDA2 5059 aa0.91□□□□□ -2.26
EFHC1-220ENST00000636398 LPAP08519 4548 aa0.91□□□□□ -2.26
EFHC1-220ENST00000636398 DNAH8Q96JB1 4490 aa0.9□□□□□ -2.27
EFHC1-220ENST00000636398 C9orf92A6NGG3 77 aa0.89□□□□□ -2.27
EFHC1-220ENST00000636398 M0R2T5 61 aa0.89□□□□□ -2.27
EFHC1-220ENST00000636398 PKHD1L1Q86WI1 4243 aa0.89□□□□□ -2.27
EFHC1-220ENST00000636398 CRCT1Q9UGL9 99 aa0.89□□□□□ -2.27
EFHC1-220ENST00000636398 MMP24-AS1A0A0U1RRL7 71 aa0.87□□□□□ -2.27
EFHC1-220ENST00000636398 KRTAP19-3Q7Z4W3 81 aa0.87□□□□□ -2.27
EFHC1-220ENST00000636398 KRTAP4-1Q9BYQ7 146 aa0.87□□□□□ -2.27
EFHC1-220ENST00000636398 TNXBP22105 4242 aa0.87□□□□□ -2.27
EFHC1-220ENST00000636398 MUC2Q02817 5179 aa0.86□□□□□ -2.27
EFHC1-220ENST00000636398 FSIP2Q5CZC0 6907 aa0.85□□□□□ -2.27
EFHC1-220ENST00000636398 MT1HP80294 61 aa0.84□□□□□ -2.27
EFHC1-220ENST00000636398 KRTAP2-3P0C7H8 128 aa0.84□□□□□ -2.28
EFHC1-220ENST00000636398 KRTAP2-4Q9BYR9 128 aa0.84□□□□□ -2.28
EFHC1-220ENST00000636398 KRTAP2-1Q9BYU5 128 aa0.84□□□□□ -2.28
EFHC1-220ENST00000636398 FAT4Q6V0I7 4981 aa0.83□□□□□ -2.28
EFHC1-220ENST00000636398 RPS29P62273 56 aaKnown RBP0.82□□□□□ -2.28
EFHC1-220ENST00000636398 KRTAP19-2Q3LHN2 52 aa0.81□□□□□ -2.28
EFHC1-220ENST00000636398 MUC17Q685J3 4493 aa0.79□□□□□ -2.28
EFHC1-220ENST00000636398 MACF1Q9UPN3 7388 aaKnown RBP0.79□□□□□ -2.28
EFHC1-220ENST00000636398 MT2AP02795 61 aa0.78□□□□□ -2.29
EFHC1-220ENST00000636398 MT1FP04733 61 aa0.78□□□□□ -2.29
EFHC1-220ENST00000636398 FCGBPQ9Y6R7 5405 aaPredicted RBP0.76□□□□□ -2.29
EFHC1-220ENST00000636398 MUC5ACP98088 5654 aa0.76□□□□□ -2.29
EFHC1-220ENST00000636398 SYNE2Q8WXH0 6885 aaKnown RBP0.75□□□□□ -2.29
EFHC1-220ENST00000636398 USH2AO75445 5202 aa0.74□□□□□ -2.29
EFHC1-220ENST00000636398 SSPOA2VEC9 5147 aa0.73□□□□□ -2.29
EFHC1-220ENST00000636398 M0QZ58 72 aa0.73□□□□□ -2.29
EFHC1-220ENST00000636398 PRM1P04553 51 aa0.73□□□□□ -2.29
EFHC1-220ENST00000636398 FLGP20930 4061 aaPredicted RBP0.73□□□□□ -2.29
EFHC1-220ENST00000636398 KRTAP20-1Q3LI63 56 aa0.72□□□□□ -2.29
EFHC1-220ENST00000636398 KRTAP19-6Q3LI70 58 aa0.72□□□□□ -2.29
EFHC1-220ENST00000636398 SPRR2EP22531 72 aa0.69□□□□□ -2.3
EFHC1-220ENST00000636398 SPRR2BP35325 72 aa0.69□□□□□ -2.3
EFHC1-220ENST00000636398 SPRR2AP35326 72 aa0.69□□□□□ -2.3
EFHC1-220ENST00000636398 SPRR2FQ96RM1 72 aa0.69□□□□□ -2.3
EFHC1-220ENST00000636398 NEBP20929 6669 aa0.69□□□□□ -2.3
EFHC1-220ENST00000636398 MT1BP07438 61 aa0.68□□□□□ -2.3
EFHC1-220ENST00000636398 TNP1P09430 55 aa0.67□□□□□ -2.3
EFHC1-220ENST00000636398 SPRR2DP22532 72 aa0.67□□□□□ -2.3
EFHC1-220ENST00000636398 KRTAP8-1Q8IUC2 63 aa0.67□□□□□ -2.3
EFHC1-220ENST00000636398 SPRR2GQ9BYE4 73 aa0.67□□□□□ -2.3
EFHC1-220ENST00000636398 KMT2DO14686 5537 aa0.66□□□□□ -2.3
EFHC1-220ENST00000636398 KRTAP19-8Q3LI54 63 aa0.66□□□□□ -2.3
EFHC1-220ENST00000636398 MUC12Q9UKN1 5478 aa0.66□□□□□ -2.3
EFHC1-220ENST00000636398 MT1XP80297 61 aa0.64□□□□□ -2.31
EFHC1-220ENST00000636398 KRTAP21-1Q3LI58 79 aa0.64□□□□□ -2.31
EFHC1-220ENST00000636398 MDN1Q9NU22 5596 aa0.64□□□□□ -2.31
EFHC1-220ENST00000636398 MT4P47944 62 aa0.61□□□□□ -2.31
EFHC1-220ENST00000636398 DSTQ03001 7570 aaKnown RBP0.59□□□□□ -2.32
EFHC1-220ENST00000636398 SYNE1Q8NF91 8797 aaKnown RBP0.58□□□□□ -2.32
EFHC1-220ENST00000636398 MT1EP04732 61 aa0.57□□□□□ -2.32
EFHC1-220ENST00000636398 KRTAP19-5Q3LI72 72 aa0.57□□□□□ -2.32
EFHC1-220ENST00000636398 MT1GP13640 62 aa0.55□□□□□ -2.32
EFHC1-220ENST00000636398 KRTAP19-7Q3SYF9 63 aa0.55□□□□□ -2.32
EFHC1-220ENST00000636398 MT1MQ8N339 61 aa0.55□□□□□ -2.32
EFHC1-220ENST00000636398 MT1LQ93083 61 aa0.54□□□□□ -2.32
EFHC1-220ENST00000636398 KRTAP5-10Q6L8G5 202 aa0.53□□□□□ -2.32
EFHC1-220ENST00000636398 KRTAP20-2Q3LI61 65 aa0.51□□□□□ -2.33
EFHC1-220ENST00000636398 MT1AP04731 61 aa0.49□□□□□ -2.33
EFHC1-220ENST00000636398 MUC16Q8WXI7 14507 aa0.48□□□□□ -2.33
EFHC1-220ENST00000636398 KRTAP6-1Q3LI64 71 aa0.47□□□□□ -2.33
EFHC1-220ENST00000636398 KRTAP6-2Q3LI66 62 aa0.46□□□□□ -2.34
EFHC1-220ENST00000636398 PHGR1C9JFL3 82 aa0.36□□□□□ -2.35
Retrieved 78 of 20,778 RNA–protein pairs in 44.5 ms