RNA–Protein interactions for RNA: ENST00000636398.1

EFHC1-220, Transcript of EF-hand domain containing 1, humanhuman

TSL 5

Gene EFHC1, Length 1,703 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFHC1-220ENST00000636398 AEBP2Q6ZN18 517 aaPredicted RBP12.47□□□□□ -0.41
EFHC1-220ENST00000636398 POTEDQ86YR6 584 aa12.46□□□□□ -0.41
EFHC1-220ENST00000636398 CHIC1Q5VXU3 224 aa12.23□□□□□ -0.45
EFHC1-220ENST00000636398 PHF23Q9BUL5 403 aaPredicted RBP10.87□□□□□ -0.67
EFHC1-220ENST00000636398 SENP3Q9H4L4 574 aaPredicted RBP10.75□□□□□ -0.69
EFHC1-220ENST00000636398 FOXD1Q16676 465 aa10.17□□□□□ -0.78
EFHC1-220ENST00000636398 MSH5O43196 834 aa10.16□□□□□ -0.78
EFHC1-220ENST00000636398 PLPPR3Q6T4P5 718 aa10.15□□□□□ -0.78
EFHC1-220ENST00000636398 CACNB1Q02641 598 aaPredicted RBP9.62□□□□□ -0.87
EFHC1-220ENST00000636398 ADRA2BP18089 450 aa9.57□□□□□ -0.88
EFHC1-220ENST00000636398 POTEHQ6S545 545 aa9.47□□□□□ -0.89
EFHC1-220ENST00000636398 KCNA4P22459 653 aa9.45□□□□□ -0.9
EFHC1-220ENST00000636398 EHMT2Q96KQ7 1210 aa9.44□□□□□ -0.9
EFHC1-220ENST00000636398 PPP6R1Q9UPN7 881 aa9.43□□□□□ -0.9
EFHC1-220ENST00000636398 PIAS4Q8N2W9 510 aaPredicted RBP9.25□□□□□ -0.93
EFHC1-220ENST00000636398 CSRNP3Q8WYN3 585 aa9.07□□□□□ -0.96
EFHC1-220ENST00000636398 SLC4A1APQ9BWU0 796 aaKnown RBP9.05□□□□□ -0.96
EFHC1-220ENST00000636398 PPP4R3CPQ6ZMV5 832 aa9.03□□□□□ -0.96
EFHC1-220ENST00000636398 NCBP3Q53F19 620 aaKnown RBP8.89□□□□□ -0.99
EFHC1-220ENST00000636398 NPM3O75607 178 aaKnown RBP8.83□□□□□ -1
EFHC1-220ENST00000636398 ZBTB22O15209 634 aa8.72□□□□□ -1.01
EFHC1-220ENST00000636398 CNKSR2Q8WXI2 1034 aa8.64□□□□□ -1.03
EFHC1-220ENST00000636398 SCAF1Q9H7N4 1312 aaKnown RBP8.54□□□□□ -1.04
EFHC1-220ENST00000636398 FOXD4L1Q9NU39 408 aa8.49□□□□□ -1.05
EFHC1-220ENST00000636398 RNF39Q9H2S5 420 aa8.49□□□□□ -1.05
EFHC1-220ENST00000636398 PLSCR2Q9NRY7 297 aa8.45□□□□□ -1.06
EFHC1-220ENST00000636398 MAPK8IP2Q13387 824 aaPredicted RBP8.43□□□□□ -1.06
EFHC1-220ENST00000636398 DMRT2Q9Y5R5 561 aa8.42□□□□□ -1.06
EFHC1-220ENST00000636398 DNAJC5BQ9UF47 199 aa8.4□□□□□ -1.06
EFHC1-220ENST00000636398 SLC24A1O60721 1099 aa8.37□□□□□ -1.07
EFHC1-220ENST00000636398 RTN4Q9NQC3 1192 aaKnown RBP8.37□□□□□ -1.07
EFHC1-220ENST00000636398 RNF216Q9NWF9 866 aaPredicted RBP8.34□□□□□ -1.07
EFHC1-220ENST00000636398 C1QBPQ07021 282 aaKnown RBP8.31□□□□□ -1.08
EFHC1-220ENST00000636398 AMER1Q5JTC6 1135 aaPredicted RBP8.3□□□□□ -1.08
EFHC1-220ENST00000636398 SLC4A2P04920 1241 aa8.22□□□□□ -1.09
EFHC1-220ENST00000636398 HOXD11P31277 338 aaPredicted RBP8.17□□□□□ -1.1
EFHC1-220ENST00000636398 SP7Q8TDD2 431 aaPredicted RBP8.17□□□□□ -1.1
EFHC1-220ENST00000636398 FKBP8Q14318 412 aa8.16□□□□□ -1.1
EFHC1-220ENST00000636398 MYCNP04198 464 aaPredicted RBP8.11□□□□□ -1.11
EFHC1-220ENST00000636398 ATXN8OSP0DMR3 200 aa8.11□□□□□ -1.11
EFHC1-220ENST00000636398 DCAF8L1A6NGE4 600 aa8.05□□□□□ -1.12
EFHC1-220ENST00000636398 ATF5Q9Y2D1 282 aaPredicted RBP7.93□□□□□ -1.14
EFHC1-220ENST00000636398 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.81□□□□□ -1.162e-6■■■■□ 23.3
EFHC1-220ENST00000636398 SAMD1Q6SPF0 538 aaPredicted RBP7.77□□□□□ -1.17
EFHC1-220ENST00000636398 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.76□□□□□ -1.17
EFHC1-220ENST00000636398 HNRNPUL2Q1KMD3 747 aaKnown RBP7.76□□□□□ -1.17
EFHC1-220ENST00000636398 U3KPZ7 1027 aaPredicted RBP7.75□□□□□ -1.17
EFHC1-220ENST00000636398 ZNF219Q9P2Y4 722 aaPredicted RBP7.68□□□□□ -1.18
EFHC1-220ENST00000636398 PLCB2Q00722 1185 aa7.66□□□□□ -1.18
EFHC1-220ENST00000636398 FBXO3Q9UK99 471 aa7.66□□□□□ -1.18
EFHC1-220ENST00000636398 SPDYE4A6NLX3 237 aa7.64□□□□□ -1.19
EFHC1-220ENST00000636398 LHX8Q68G74 356 aa7.64□□□□□ -1.19
EFHC1-220ENST00000636398 MKRN4PQ13434 485 aaPredicted RBP7.59□□□□□ -1.19
EFHC1-220ENST00000636398 VASPP50552 380 aaPredicted RBP7.58□□□□□ -1.2
EFHC1-220ENST00000636398 HAP1P54257 671 aaPredicted RBP7.58□□□□□ -1.2
EFHC1-220ENST00000636398 CHRDL2Q6WN34 429 aa7.58□□□□□ -1.2
EFHC1-220ENST00000636398 DCAF8L2P0C7V8 631 aa7.57□□□□□ -1.2
EFHC1-220ENST00000636398 IFNLR1Q8IU57 520 aaPredicted RBP7.56□□□□□ -1.2
EFHC1-220ENST00000636398 PROM2Q8N271 834 aa7.56□□□□□ -1.2
EFHC1-220ENST00000636398 APLP2Q06481 763 aa7.52□□□□□ -1.2
EFHC1-220ENST00000636398 PKD2Q13563 968 aa7.49□□□□□ -1.21
EFHC1-220ENST00000636398 DSG3P32926 999 aa7.48□□□□□ -1.21
EFHC1-220ENST00000636398 PRKCSHP14314 528 aaPredicted RBP7.47□□□□□ -1.21
EFHC1-220ENST00000636398 FBLN2P98095 1184 aa7.47□□□□□ -1.21
EFHC1-220ENST00000636398 BCANQ96GW7 911 aa7.47□□□□□ -1.21
EFHC1-220ENST00000636398 TRHP20396 242 aaPredicted RBP7.44□□□□□ -1.22
EFHC1-220ENST00000636398 POLA2Q14181 598 aa7.43□□□□□ -1.22
EFHC1-220ENST00000636398 VSIG10Q8N0Z9 540 aa7.43□□□□□ -1.22
EFHC1-220ENST00000636398 SPINK5Q9NQ38 1064 aaPredicted RBP7.41□□□□□ -1.22
EFHC1-220ENST00000636398 TAOK2Q9UL54 1235 aa7.41□□□□□ -1.22
EFHC1-220ENST00000636398 HAX1O00165 279 aa7.37□□□□□ -1.23
EFHC1-220ENST00000636398 KDM2AQ9Y2K7 1162 aa7.37□□□□□ -1.23
EFHC1-220ENST00000636398 ECM2O94769 699 aaPredicted RBP7.35□□□□□ -1.23
EFHC1-220ENST00000636398 NPM1P06748 294 aaKnown RBP eCLIP7.35□□□□□ -1.23
EFHC1-220ENST00000636398 KLHL34Q8N239 644 aa7.35□□□□□ -1.23
EFHC1-220ENST00000636398 BBXQ8WY36 941 aaPredicted RBP7.35□□□□□ -1.23
EFHC1-220ENST00000636398 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.35□□□□□ -1.23
EFHC1-220ENST00000636398 PAXIP1Q6ZW49 1069 aaPredicted RBP7.34□□□□□ -1.23
EFHC1-220ENST00000636398 CAPN15O75808 1086 aa7.33□□□□□ -1.24
EFHC1-220ENST00000636398 SPOCK2Q92563 424 aa7.33□□□□□ -1.24
EFHC1-220ENST00000636398 CFAP44Q96MT7 982 aa7.32□□□□□ -1.24
EFHC1-220ENST00000636398 TPRNQ4KMQ1 711 aa7.32□□□□□ -1.24
EFHC1-220ENST00000636398 PCDH10Q9P2E7 1040 aa7.3□□□□□ -1.24
EFHC1-220ENST00000636398 RGL2O15211 777 aa7.28□□□□□ -1.24
EFHC1-220ENST00000636398 POTEMA6NI47 508 aa7.27□□□□□ -1.25
EFHC1-220ENST00000636398 ABCB7O75027 752 aa7.27□□□□□ -1.25
EFHC1-220ENST00000636398 ZBTB12Q9Y330 459 aaPredicted RBP7.25□□□□□ -1.25
EFHC1-220ENST00000636398 PLCD3Q8N3E9 789 aa7.24□□□□□ -1.25
EFHC1-220ENST00000636398 TSHZ2Q9NRE2 1034 aa7.24□□□□□ -1.25
EFHC1-220ENST00000636398 SPRYD3Q8NCJ5 442 aa7.23□□□□□ -1.25
EFHC1-220ENST00000636398 ZNF692Q9BU19 519 aaPredicted RBP7.22□□□□□ -1.25
EFHC1-220ENST00000636398 STAG3Q9UJ98 1225 aa7.22□□□□□ -1.25
EFHC1-220ENST00000636398 POTEGQ6S5H5 508 aa7.19□□□□□ -1.26
EFHC1-220ENST00000636398 MIER1Q8N108 512 aa7.19□□□□□ -1.26
EFHC1-220ENST00000636398 CHGAP10645 457 aaKnown RBP7.18□□□□□ -1.26
EFHC1-220ENST00000636398 RBM42Q9BTD8 480 aaKnown RBP7.18□□□□□ -1.26
EFHC1-220ENST00000636398 CIZ1Q9ULV3 898 aaPredicted RBP7.16□□□□□ -1.26
EFHC1-220ENST00000636398 OSCARQ8IYS5 282 aa7.15□□□□□ -1.26
EFHC1-220ENST00000636398 PABPN1Q86U42 306 aaKnown RBP eCLIP7.15□□□□□ -1.27
EFHC1-220ENST00000636398 SSUH2Q9Y2M2 353 aa7.15□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms