RNA–Protein interactions for RNA: ENST00000635945.1

SCN2A-208, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

TSL 5

Gene SCN2A, Length 3,119 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-208ENST00000635945 KRTAP2-4Q9BYR9 128 aa2.61□□□□□ -1.99
SCN2A-208ENST00000635945 KRTAP2-1Q9BYU5 128 aa2.61□□□□□ -1.99
SCN2A-208ENST00000635945 CRCT1Q9UGL9 99 aa2.58□□□□□ -2
SCN2A-208ENST00000635945 KRTAP19-6Q3LI70 58 aa2.57□□□□□ -2
SCN2A-208ENST00000635945 SYNE1Q8NF91 8797 aaKnown RBP2.56□□□□□ -2
SCN2A-208ENST00000635945 OBSCNQ5VST9 7968 aa2.56□□□□□ -2
SCN2A-208ENST00000635945 SSPOA2VEC9 5147 aa2.56□□□□□ -2
SCN2A-208ENST00000635945 MUC12Q9UKN1 5478 aa2.55□□□□□ -2
SCN2A-208ENST00000635945 KRTAP19-7Q3SYF9 63 aa2.54□□□□□ -2
SCN2A-208ENST00000635945 KRTAP4-3Q9BYR4 195 aa2.53□□□□□ -2
SCN2A-208ENST00000635945 KRTAP12-4P60329 112 aa2.51□□□□□ -2.01
SCN2A-208ENST00000635945 MT1LQ93083 61 aa2.47□□□□□ -2.01
SCN2A-208ENST00000635945 MT1GP13640 62 aa2.47□□□□□ -2.01
SCN2A-208ENST00000635945 KRTAP4-9Q9BYQ8 210 aa2.44□□□□□ -2.02
SCN2A-208ENST00000635945 MT1EP04732 61 aa2.42□□□□□ -2.02
SCN2A-208ENST00000635945 KRTAP5-3Q6L8H2 238 aa2.41□□□□□ -2.02
SCN2A-208ENST00000635945 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.39□□□□□ -2.03
SCN2A-208ENST00000635945 LCE3BQ5TA77 95 aa2.38□□□□□ -2.03
SCN2A-208ENST00000635945 KRTAP9-7A8MTY7 169 aa2.36□□□□□ -2.03
SCN2A-208ENST00000635945 KRTAP5-9P26371 169 aa2.35□□□□□ -2.03
SCN2A-208ENST00000635945 KRTAP6-3Q3LI67 103 aa2.35□□□□□ -2.03
SCN2A-208ENST00000635945 SYNE2Q8WXH0 6885 aaKnown RBP2.35□□□□□ -2.03
SCN2A-208ENST00000635945 HMCN1Q96RW7 5635 aa2.33□□□□□ -2.04
SCN2A-208ENST00000635945 PRM1P04553 51 aa2.27□□□□□ -2.05
SCN2A-208ENST00000635945 MACF1Q9UPN3 7388 aaKnown RBP2.27□□□□□ -2.05
SCN2A-208ENST00000635945 MT1MQ8N339 61 aa2.27□□□□□ -2.05
SCN2A-208ENST00000635945 KRTAP19-3Q7Z4W3 81 aa2.21□□□□□ -2.06
SCN2A-208ENST00000635945 LCE3DQ9BYE3 92 aa2.2□□□□□ -2.06
SCN2A-208ENST00000635945 KRTAP5-5Q701N2 237 aaPredicted RBP2.19□□□□□ -2.06
SCN2A-208ENST00000635945 MDN1Q9NU22 5596 aa2.18□□□□□ -2.06
SCN2A-208ENST00000635945 KRTAP6-1Q3LI64 71 aa2.17□□□□□ -2.06
SCN2A-208ENST00000635945 KRTAP19-4Q3LI73 84 aa2.17□□□□□ -2.06
SCN2A-208ENST00000635945 LCE1AQ5T7P2 110 aa2.17□□□□□ -2.06
SCN2A-208ENST00000635945 LCE3EQ5T5B0 92 aa2.16□□□□□ -2.06
SCN2A-208ENST00000635945 NEBP20929 6669 aa2.15□□□□□ -2.07
SCN2A-208ENST00000635945 LCE1DQ5T752 114 aa2.15□□□□□ -2.07
SCN2A-208ENST00000635945 SPRR2FQ96RM1 72 aa2.14□□□□□ -2.07
SCN2A-208ENST00000635945 KRTAP4-12Q9BQ66 201 aa2.13□□□□□ -2.07
SCN2A-208ENST00000635945 KRTAP4-2Q9BYR5 136 aa2.11□□□□□ -2.07
SCN2A-208ENST00000635945 KRTAP6-2Q3LI66 62 aa2.1□□□□□ -2.07
SCN2A-208ENST00000635945 KRTAP9-9Q9BYP9 154 aa2.1□□□□□ -2.07
SCN2A-208ENST00000635945 KRTAP9-4Q9BYQ2 154 aa2.1□□□□□ -2.07
SCN2A-208ENST00000635945 LCE5AQ5TCM9 118 aa2.08□□□□□ -2.08
SCN2A-208ENST00000635945 SPRR2EP22531 72 aa2.08□□□□□ -2.08
SCN2A-208ENST00000635945 SPRR2BP35325 72 aa2.08□□□□□ -2.08
SCN2A-208ENST00000635945 SPRR2AP35326 72 aa2.08□□□□□ -2.08
SCN2A-208ENST00000635945 KRTAP20-1Q3LI63 56 aa2.08□□□□□ -2.08
SCN2A-208ENST00000635945 MT1AP04731 61 aa2.07□□□□□ -2.08
SCN2A-208ENST00000635945 MUC5BQ9HC84 5762 aaPredicted RBP2.03□□□□□ -2.09
SCN2A-208ENST00000635945 SPRR2DP22532 72 aa2.01□□□□□ -2.09
SCN2A-208ENST00000635945 KRTAP2-2Q9BYT5 123 aa1.99□□□□□ -2.09
SCN2A-208ENST00000635945 LCE1EQ5T753 118 aa1.98□□□□□ -2.09
SCN2A-208ENST00000635945 KRTAP5-4Q6L8H1 288 aa1.95□□□□□ -2.1
SCN2A-208ENST00000635945 GPR98Q8WXG9 6306 aa1.95□□□□□ -2.1
SCN2A-208ENST00000635945 KRTAP4-11Q9BYQ6 195 aa1.95□□□□□ -2.1
SCN2A-208ENST00000635945 LCE4AQ5TA78 99 aa1.89□□□□□ -2.11
SCN2A-208ENST00000635945 MUC19Q7Z5P9 8384 aa1.81□□□□□ -2.12
SCN2A-208ENST00000635945 MT3P25713 68 aa1.8□□□□□ -2.12
SCN2A-208ENST00000635945 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.77□□□□□ -2.13
SCN2A-208ENST00000635945 KRTAP5-2Q701N4 177 aa1.75□□□□□ -2.13
SCN2A-208ENST00000635945 MT4P47944 62 aa1.74□□□□□ -2.13
SCN2A-208ENST00000635945 KRTAP5-7Q6L8G8 165 aa1.73□□□□□ -2.13
SCN2A-208ENST00000635945 KRTAP20-2Q3LI61 65 aa1.72□□□□□ -2.13
SCN2A-208ENST00000635945 MUC5ACP98088 5654 aa1.72□□□□□ -2.13
SCN2A-208ENST00000635945 AHNAKQ09666 5890 aaKnown RBP1.7□□□□□ -2.14
SCN2A-208ENST00000635945 KRTAP5-10Q6L8G5 202 aa1.69□□□□□ -2.14
SCN2A-208ENST00000635945 AHNAK2Q8IVF2 5795 aa1.66□□□□□ -2.14
SCN2A-208ENST00000635945 LCE1FQ5T754 118 aa1.63□□□□□ -2.15
SCN2A-208ENST00000635945 LCE1BQ5T7P3 118 aa1.62□□□□□ -2.15
SCN2A-208ENST00000635945 KRTAP5-8O75690 187 aa1.53□□□□□ -2.16
SCN2A-208ENST00000635945 KRTAP5-1Q6L8H4 278 aa1.49□□□□□ -2.17
SCN2A-208ENST00000635945 KRTAP4-4Q9BYR3 166 aa1.45□□□□□ -2.18
SCN2A-208ENST00000635945 LCE1CQ5T751 118 aa1.39□□□□□ -2.19
SCN2A-208ENST00000635945 KRTAP21-2Q3LI59 83 aa1.33□□□□□ -2.2
SCN2A-208ENST00000635945 KRTAP21-1Q3LI58 79 aa1.33□□□□□ -2.2
SCN2A-208ENST00000635945 KRTAP5-11Q6L8G4 156 aa1.26□□□□□ -2.21
SCN2A-208ENST00000635945 PHGR1C9JFL3 82 aa1.06□□□□□ -2.24
SCN2A-208ENST00000635945 MUC16Q8WXI7 14507 aa0.75□□□□□ -2.29
Retrieved 78 of 20,778 RNA–protein pairs in 59 ms