RNA–Protein interactions for RNA: ENST00000630712.2

TCF4-272, Transcript of transcription factor 4, humanhuman

TSL 3

Gene TCF4, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-272ENST00000630712 RPS29P62273 56 aaKnown RBP2.23□□□□□ -2.05
TCF4-272ENST00000630712 RNF213Q63HN8 5207 aa2.23□□□□□ -2.05
TCF4-272ENST00000630712 LRP1Q07954 4544 aaKnown RBP2.22□□□□□ -2.05
TCF4-272ENST00000630712 MT1HL1P0DM35 61 aa2.19□□□□□ -2.06
TCF4-272ENST00000630712 KRTAP10-4P60372 401 aaPredicted RBP2.19□□□□□ -2.06
TCF4-272ENST00000630712 LRP2P98164 4655 aa2.19□□□□□ -2.06
TCF4-272ENST00000630712 CRCT1Q9UGL9 99 aa2.19□□□□□ -2.06
TCF4-272ENST00000630712 LPAP08519 4548 aa2.14□□□□□ -2.07
TCF4-272ENST00000630712 KRTAP10-10P60014 251 aa2.11□□□□□ -2.07
TCF4-272ENST00000630712 FAT4Q6V0I7 4981 aa2.1□□□□□ -2.07
TCF4-272ENST00000630712 C9orf92A6NGG3 77 aa2.08□□□□□ -2.08
TCF4-272ENST00000630712 MUC2Q02817 5179 aa2.08□□□□□ -2.08
TCF4-272ENST00000630712 MUC17Q685J3 4493 aa2.07□□□□□ -2.08
TCF4-272ENST00000630712 FLGP20930 4061 aaPredicted RBP2.07□□□□□ -2.08
TCF4-272ENST00000630712 FSIP2Q5CZC0 6907 aa2.06□□□□□ -2.08
TCF4-272ENST00000630712 TNP1P09430 55 aa2.02□□□□□ -2.09
TCF4-272ENST00000630712 MUC19Q7Z5P9 8384 aa2.02□□□□□ -2.09
TCF4-272ENST00000630712 LCE3DQ9BYE3 92 aa1.96□□□□□ -2.1
TCF4-272ENST00000630712 KRTAP4-1Q9BYQ7 146 aa1.92□□□□□ -2.1
TCF4-272ENST00000630712 KRTAP8-1Q8IUC2 63 aa1.9□□□□□ -2.11
TCF4-272ENST00000630712 MT1HP80294 61 aa1.89□□□□□ -2.11
TCF4-272ENST00000630712 KRTAP2-3P0C7H8 128 aa1.88□□□□□ -2.11
TCF4-272ENST00000630712 KRTAP5-7Q6L8G8 165 aa1.88□□□□□ -2.11
TCF4-272ENST00000630712 KRTAP2-4Q9BYR9 128 aa1.88□□□□□ -2.11
TCF4-272ENST00000630712 KRTAP2-1Q9BYU5 128 aa1.88□□□□□ -2.11
TCF4-272ENST00000630712 KRTAP19-2Q3LHN2 52 aa1.85□□□□□ -2.11
TCF4-272ENST00000630712 KRTAP6-3Q3LI67 103 aa1.84□□□□□ -2.11
TCF4-272ENST00000630712 M0R2T5 61 aa1.83□□□□□ -2.12
TCF4-272ENST00000630712 MACF1Q9UPN3 7388 aaKnown RBP1.81□□□□□ -2.12
TCF4-272ENST00000630712 KRTAP20-1Q3LI63 56 aa1.81□□□□□ -2.12
TCF4-272ENST00000630712 SSPOA2VEC9 5147 aa1.8□□□□□ -2.12
TCF4-272ENST00000630712 FCGBPQ9Y6R7 5405 aaPredicted RBP1.8□□□□□ -2.12
TCF4-272ENST00000630712 SYNE2Q8WXH0 6885 aaKnown RBP1.79□□□□□ -2.12
TCF4-272ENST00000630712 USH2AO75445 5202 aa1.77□□□□□ -2.13
TCF4-272ENST00000630712 KRTAP12-3P60328 96 aa1.74□□□□□ -2.13
TCF4-272ENST00000630712 KRTAP12-4P60329 112 aa1.73□□□□□ -2.13
TCF4-272ENST00000630712 KRTAP19-6Q3LI70 58 aa1.72□□□□□ -2.13
TCF4-272ENST00000630712 MT2AP02795 61 aa1.69□□□□□ -2.14
TCF4-272ENST00000630712 NEBP20929 6669 aa1.69□□□□□ -2.14
TCF4-272ENST00000630712 MT1FP04733 61 aa1.68□□□□□ -2.14
TCF4-272ENST00000630712 KRTAP21-2Q3LI59 83 aa1.68□□□□□ -2.14
TCF4-272ENST00000630712 KRTAP19-5Q3LI72 72 aa1.66□□□□□ -2.14
TCF4-272ENST00000630712 SPRR2GQ9BYE4 73 aa1.65□□□□□ -2.15
TCF4-272ENST00000630712 MUC12Q9UKN1 5478 aa1.64□□□□□ -2.15
TCF4-272ENST00000630712 MT1BP07438 61 aa1.6□□□□□ -2.15
TCF4-272ENST00000630712 KMT2DO14686 5537 aa1.6□□□□□ -2.15
TCF4-272ENST00000630712 KRTAP19-8Q3LI54 63 aa1.59□□□□□ -2.15
TCF4-272ENST00000630712 SPRR2EP22531 72 aa1.56□□□□□ -2.16
TCF4-272ENST00000630712 SPRR2BP35325 72 aa1.56□□□□□ -2.16
TCF4-272ENST00000630712 SPRR2AP35326 72 aa1.56□□□□□ -2.16
TCF4-272ENST00000630712 MT1XP80297 61 aa1.56□□□□□ -2.16
TCF4-272ENST00000630712 GPR98Q8WXG9 6306 aa1.54□□□□□ -2.16
TCF4-272ENST00000630712 PRM1P04553 51 aa1.52□□□□□ -2.17
TCF4-272ENST00000630712 SPRR2FQ96RM1 72 aa1.52□□□□□ -2.17
TCF4-272ENST00000630712 SPRR2DP22532 72 aa1.51□□□□□ -2.17
TCF4-272ENST00000630712 MDN1Q9NU22 5596 aa1.49□□□□□ -2.17
TCF4-272ENST00000630712 MT1AP04731 61 aa1.46□□□□□ -2.18
TCF4-272ENST00000630712 HMCN1Q96RW7 5635 aa1.44□□□□□ -2.18
TCF4-272ENST00000630712 SYNE1Q8NF91 8797 aaKnown RBP1.43□□□□□ -2.18
TCF4-272ENST00000630712 KRTAP5-10Q6L8G5 202 aa1.42□□□□□ -2.18
TCF4-272ENST00000630712 MT1EP04732 61 aa1.41□□□□□ -2.18
TCF4-272ENST00000630712 DSTQ03001 7570 aaKnown RBP1.39□□□□□ -2.19
TCF4-272ENST00000630712 KRTAP19-7Q3SYF9 63 aa1.39□□□□□ -2.19
TCF4-272ENST00000630712 MT4P47944 62 aa1.37□□□□□ -2.19
TCF4-272ENST00000630712 MT1LQ93083 61 aa1.37□□□□□ -2.19
TCF4-272ENST00000630712 KRTAP6-2Q3LI66 62 aa1.34□□□□□ -2.19
TCF4-272ENST00000630712 AHNAK2Q8IVF2 5795 aa1.32□□□□□ -2.2
TCF4-272ENST00000630712 KRTAP19-3Q7Z4W3 81 aa1.28□□□□□ -2.2
TCF4-272ENST00000630712 MT1MQ8N339 61 aa1.28□□□□□ -2.2
TCF4-272ENST00000630712 MT1GP13640 62 aa1.24□□□□□ -2.21
TCF4-272ENST00000630712 KRTAP20-2Q3LI61 65 aa1.19□□□□□ -2.22
TCF4-272ENST00000630712 AHNAKQ09666 5890 aaKnown RBP1.17□□□□□ -2.22
TCF4-272ENST00000630712 MUC5ACP98088 5654 aa1.16□□□□□ -2.22
TCF4-272ENST00000630712 KRTAP6-1Q3LI64 71 aa1.14□□□□□ -2.23
TCF4-272ENST00000630712 KRTAP21-1Q3LI58 79 aa1.11□□□□□ -2.23
TCF4-272ENST00000630712 MUC5BQ9HC84 5762 aaPredicted RBP1.1□□□□□ -2.23
TCF4-272ENST00000630712 PHGR1C9JFL3 82 aa0.85□□□□□ -2.27
TCF4-272ENST00000630712 MUC16Q8WXI7 14507 aa0.8□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 36.9 ms