RNA–Protein interactions for RNA: ENST00000629659.2

EWSR1-222, Transcript of EWS RNA binding protein 1, human

TSL 5 BASIC

Gene EWSR1, Length 2,446 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EWSR1-222	ENST00000629659	KRTAP9-2	Q9BYQ4	174 aa		5.67	□□□□□ -1.5
EWSR1-222	ENST00000629659	KRTAP19-6	Q3LI70	58 aa		5.66	□□□□□ -1.5
EWSR1-222	ENST00000629659	LOC100996750	A0A140TA64	210 aa		5.55	□□□□□ -1.52
EWSR1-222	ENST00000629659	FCGBP	Q9Y6R7	5405 aa	Predicted RBP	5.53	□□□□□ -1.52
EWSR1-222	ENST00000629659	KRTAP4-3	Q9BYR4	195 aa		5.5	□□□□□ -1.53
EWSR1-222	ENST00000629659	MUC12	Q9UKN1	5478 aa		5.47	□□□□□ -1.53
EWSR1-222	ENST00000629659	MT1G	P13640	62 aa		5.46	□□□□□ -1.53
EWSR1-222	ENST00000629659	CRCT1	Q9UGL9	99 aa		5.42	□□□□□ -1.54
EWSR1-222	ENST00000629659	KRTAP12-4	P60329	112 aa		5.39	□□□□□ -1.55
EWSR1-222	ENST00000629659	MT1M	Q8N339	61 aa		5.38	□□□□□ -1.55
EWSR1-222	ENST00000629659	KRTAP19-3	Q7Z4W3	81 aa		5.36	□□□□□ -1.55
EWSR1-222	ENST00000629659	MACF1	Q9UPN3	7388 aa	Known RBP	5.35	□□□□□ -1.55
EWSR1-222	ENST00000629659	SYNE2	Q8WXH0	6885 aa	Known RBP	5.27	□□□□□ -1.57
EWSR1-222	ENST00000629659	SPRR2F	Q96RM1	72 aa		5.22	□□□□□ -1.57
EWSR1-222	ENST00000629659	KRTAP9-6	A0A140TA67	174 aa		5.22	□□□□□ -1.57
EWSR1-222	ENST00000629659	DST	Q03001	7570 aa	Known RBP	5.19	□□□□□ -1.58
EWSR1-222	ENST00000629659	LCE5A	Q5TCM9	118 aa		5.18	□□□□□ -1.58
EWSR1-222	ENST00000629659	LCE3B	Q5TA77	95 aa		5.12	□□□□□ -1.59
EWSR1-222	ENST00000629659	KRTAP4-9	Q9BYQ8	210 aa		5.09	□□□□□ -1.59
EWSR1-222	ENST00000629659	MT1A	P04731	61 aa		5.04	□□□□□ -1.6
EWSR1-222	ENST00000629659	KRTAP9-1	A8MXZ3	250 aa	Predicted RBP	5.03	□□□□□ -1.6
EWSR1-222	ENST00000629659	MDN1	Q9NU22	5596 aa		4.98	□□□□□ -1.61
EWSR1-222	ENST00000629659	SYNE1	Q8NF91	8797 aa	Known RBP	4.98	□□□□□ -1.61
EWSR1-222	ENST00000629659	KRTAP6-1	Q3LI64	71 aa		4.95	□□□□□ -1.62
EWSR1-222	ENST00000629659	LCE3D	Q9BYE3	92 aa		4.92	□□□□□ -1.62
EWSR1-222	ENST00000629659	LCE3E	Q5T5B0	92 aa		4.88	□□□□□ -1.63
EWSR1-222	ENST00000629659	KRTAP5-5	Q701N2	237 aa	Predicted RBP	4.87	□□□□□ -1.63
EWSR1-222	ENST00000629659	KRTAP5-9	P26371	169 aa		4.86	□□□□□ -1.63
EWSR1-222	ENST00000629659	LCE1A	Q5T7P2	110 aa		4.86	□□□□□ -1.63
EWSR1-222	ENST00000629659	KRTAP9-7	A8MTY7	169 aa		4.85	□□□□□ -1.63
EWSR1-222	ENST00000629659	PRM1	P04553	51 aa		4.81	□□□□□ -1.64
EWSR1-222	ENST00000629659	KRTAP6-3	Q3LI67	103 aa		4.8	□□□□□ -1.64
EWSR1-222	ENST00000629659	SPRR2E	P22531	72 aa		4.77	□□□□□ -1.65
EWSR1-222	ENST00000629659	SPRR2B	P35325	72 aa		4.77	□□□□□ -1.65
EWSR1-222	ENST00000629659	SPRR2A	P35326	72 aa		4.77	□□□□□ -1.65
EWSR1-222	ENST00000629659	KRTAP4-6	Q9BYQ5	205 aa		4.66	□□□□□ -1.66
EWSR1-222	ENST00000629659	KRTAP6-2	Q3LI66	62 aa		4.59	□□□□□ -1.67
EWSR1-222	ENST00000629659	NEB	P20929	6669 aa		4.58	□□□□□ -1.68
EWSR1-222	ENST00000629659	SPRR2D	P22532	72 aa		4.58	□□□□□ -1.68
EWSR1-222	ENST00000629659	KRTAP9-4	Q9BYQ2	154 aa		4.56	□□□□□ -1.68
EWSR1-222	ENST00000629659	MT3	P25713	68 aa		4.35	□□□□□ -1.71
EWSR1-222	ENST00000629659	OBSCN	Q5VST9	7968 aa		4.32	□□□□□ -1.72
EWSR1-222	ENST00000629659	KRTAP2-2	Q9BYT5	123 aa		4.29	□□□□□ -1.72
EWSR1-222	ENST00000629659	KRTAP20-1	Q3LI63	56 aa		4.21	□□□□□ -1.74
EWSR1-222	ENST00000629659	KRTAP5-4	Q6L8H1	288 aa		4.16	□□□□□ -1.74
EWSR1-222	ENST00000629659	MT4	P47944	62 aa		4.06	□□□□□ -1.76
EWSR1-222	ENST00000629659	HMCN1	Q96RW7	5635 aa		3.96	□□□□□ -1.78
EWSR1-222	ENST00000629659	LCE4A	Q5TA78	99 aa		3.95	□□□□□ -1.78
EWSR1-222	ENST00000629659	LCE1D	Q5T752	114 aa		3.94	□□□□□ -1.78
EWSR1-222	ENST00000629659	KRTAP20-2	Q3LI61	65 aa		3.94	□□□□□ -1.78
EWSR1-222	ENST00000629659	KRTAP5-2	Q701N4	177 aa		3.89	□□□□□ -1.79
EWSR1-222	ENST00000629659	KRTAP5-3	Q6L8H2	238 aa		3.81	□□□□□ -1.8
EWSR1-222	ENST00000629659	MUC5AC	P98088	5654 aa		3.78	□□□□□ -1.8
EWSR1-222	ENST00000629659	LCE1E	Q5T753	118 aa		3.64	□□□□□ -1.83
EWSR1-222	ENST00000629659	KRTAP4-11	Q9BYQ6	195 aa		3.6	□□□□□ -1.83
EWSR1-222	ENST00000629659	KRTAP5-10	Q6L8G5	202 aa		3.58	□□□□□ -1.84
EWSR1-222	ENST00000629659	KRTAP9-9	Q9BYP9	154 aa		3.58	□□□□□ -1.84
EWSR1-222	ENST00000629659	LCE1B	Q5T7P3	118 aa		3.53	□□□□□ -1.84
EWSR1-222	ENST00000629659	KRTAP4-2	Q9BYR5	136 aa		3.53	□□□□□ -1.84
EWSR1-222	ENST00000629659	KRTAP5-1	Q6L8H4	278 aa		3.49	□□□□□ -1.85
EWSR1-222	ENST00000629659	AHNAK2	Q8IVF2	5795 aa		3.46	□□□□□ -1.86
EWSR1-222	ENST00000629659	KRTAP4-12	Q9BQ66	201 aa		3.37	□□□□□ -1.87
EWSR1-222	ENST00000629659	LCE1C	Q5T751	118 aa		3.31	□□□□□ -1.88
EWSR1-222	ENST00000629659	KRTAP5-8	O75690	187 aa		3.21	□□□□□ -1.9
EWSR1-222	ENST00000629659	KRTAP21-2	Q3LI59	83 aa		3.19	□□□□□ -1.9
EWSR1-222	ENST00000629659	GPR98	Q8WXG9	6306 aa		3.17	□□□□□ -1.9
EWSR1-222	ENST00000629659	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	3.14	□□□□□ -1.91
EWSR1-222	ENST00000629659	KRTAP21-1	Q3LI58	79 aa		3.07	□□□□□ -1.92
EWSR1-222	ENST00000629659	KRTAP5-7	Q6L8G8	165 aa		3.02	□□□□□ -1.93
EWSR1-222	ENST00000629659	KRTAP4-4	Q9BYR3	166 aa		2.94	□□□□□ -1.94
EWSR1-222	ENST00000629659	MUC5B	Q9HC84	5762 aa	Predicted RBP	2.93	□□□□□ -1.94
EWSR1-222	ENST00000629659	MUC19	Q7Z5P9	8384 aa		2.89	□□□□□ -1.95
EWSR1-222	ENST00000629659	KRTAP5-11	Q6L8G4	156 aa		2.85	□□□□□ -1.95
EWSR1-222	ENST00000629659	LCE1F	Q5T754	118 aa		2.6	□□□□□ -1.99
EWSR1-222	ENST00000629659	AHNAK	Q09666	5890 aa	Known RBP	2.56	□□□□□ -2
EWSR1-222	ENST00000629659	PHGR1	C9JFL3	82 aa		2.47	□□□□□ -2.01
EWSR1-222	ENST00000629659	MUC16	Q8WXI7	14507 aa		1.66	□□□□□ -2.14

Retrieved 77 of 20,778 RNA–protein pairs in 420.4 ms