RNA–Protein interactions for RNA: ENST00000629277.1

MECP2-218, Transcript of methyl-CpG binding protein 2, humanhuman

Gene MECP2, Length 2,558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-218ENST00000629277 KRTAP4-3Q9BYR4 195 aa6.2□□□□□ -1.42
MECP2-218ENST00000629277 FCGBPQ9Y6R7 5405 aaPredicted RBP6.17□□□□□ -1.42
MECP2-218ENST00000629277 MUC12Q9UKN1 5478 aa6.16□□□□□ -1.42
MECP2-218ENST00000629277 KRTAP19-4Q3LI73 84 aa6.12□□□□□ -1.43
MECP2-218ENST00000629277 MT1GP13640 62 aa6.1□□□□□ -1.43
MECP2-218ENST00000629277 LCE2DQ5TA82 110 aaPredicted RBP6.09□□□□□ -1.43
MECP2-218ENST00000629277 DSTQ03001 7570 aaKnown RBP6.05□□□□□ -1.44
MECP2-218ENST00000629277 CRCT1Q9UGL9 99 aa6.04□□□□□ -1.44
MECP2-218ENST00000629277 KRTAP19-6Q3LI70 58 aa5.97□□□□□ -1.45
MECP2-218ENST00000629277 MT1MQ8N339 61 aa5.93□□□□□ -1.46
MECP2-218ENST00000629277 KRTAP19-3Q7Z4W3 81 aa5.88□□□□□ -1.47
MECP2-218ENST00000629277 KRTAP12-4P60329 112 aa5.86□□□□□ -1.47
MECP2-218ENST00000629277 LCE3BQ5TA77 95 aa5.7□□□□□ -1.5
MECP2-218ENST00000629277 KRTAP4-9Q9BYQ8 210 aa5.7□□□□□ -1.5
MECP2-218ENST00000629277 KRTAP9-2Q9BYQ4 174 aa5.67□□□□□ -1.5
MECP2-218ENST00000629277 SYNE1Q8NF91 8797 aaKnown RBP5.66□□□□□ -1.5
MECP2-218ENST00000629277 LCE5AQ5TCM9 118 aa5.64□□□□□ -1.51
MECP2-218ENST00000629277 SPRR2FQ96RM1 72 aa5.63□□□□□ -1.51
MECP2-218ENST00000629277 MACF1Q9UPN3 7388 aaKnown RBP5.6□□□□□ -1.51
MECP2-218ENST00000629277 SYNE2Q8WXH0 6885 aaKnown RBP5.5□□□□□ -1.53
MECP2-218ENST00000629277 MDN1Q9NU22 5596 aa5.49□□□□□ -1.53
MECP2-218ENST00000629277 KRTAP6-1Q3LI64 71 aa5.49□□□□□ -1.53
MECP2-218ENST00000629277 KRTAP9-6A0A140TA67 174 aa5.44□□□□□ -1.54
MECP2-218ENST00000629277 MT1AP04731 61 aa5.38□□□□□ -1.55
MECP2-218ENST00000629277 LCE3DQ9BYE3 92 aa5.34□□□□□ -1.55
MECP2-218ENST00000629277 KRTAP9-7A8MTY7 169 aa5.33□□□□□ -1.56
MECP2-218ENST00000629277 KRTAP2-2Q9BYT5 123 aa5.33□□□□□ -1.56
MECP2-218ENST00000629277 KRTAP5-5Q701N2 237 aaPredicted RBP5.28□□□□□ -1.56
MECP2-218ENST00000629277 LCE3EQ5T5B0 92 aa5.27□□□□□ -1.57
MECP2-218ENST00000629277 OBSCNQ5VST9 7968 aa5.26□□□□□ -1.57
MECP2-218ENST00000629277 PRM1P04553 51 aa5.23□□□□□ -1.57
MECP2-218ENST00000629277 LCE1AQ5T7P2 110 aa5.16□□□□□ -1.58
MECP2-218ENST00000629277 KRTAP6-3Q3LI67 103 aa5.16□□□□□ -1.58
MECP2-218ENST00000629277 SPRR2EP22531 72 aa5.01□□□□□ -1.61
MECP2-218ENST00000629277 SPRR2BP35325 72 aa5.01□□□□□ -1.61
MECP2-218ENST00000629277 SPRR2AP35326 72 aa5.01□□□□□ -1.61
MECP2-218ENST00000629277 KRTAP6-2Q3LI66 62 aa5.01□□□□□ -1.61
MECP2-218ENST00000629277 KRTAP9-4Q9BYQ2 154 aa4.99□□□□□ -1.61
MECP2-218ENST00000629277 KRTAP5-9P26371 169 aa4.99□□□□□ -1.61
MECP2-218ENST00000629277 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.98□□□□□ -1.61
MECP2-218ENST00000629277 SPRR2DP22532 72 aa4.76□□□□□ -1.65
MECP2-218ENST00000629277 MT3P25713 68 aa4.74□□□□□ -1.65
MECP2-218ENST00000629277 LCE1EQ5T753 118 aa4.71□□□□□ -1.66
MECP2-218ENST00000629277 LCE1DQ5T752 114 aa4.55□□□□□ -1.68
MECP2-218ENST00000629277 NEBP20929 6669 aa4.51□□□□□ -1.69
MECP2-218ENST00000629277 KRTAP4-6Q9BYQ5 205 aa4.39□□□□□ -1.71
MECP2-218ENST00000629277 KRTAP5-4Q6L8H1 288 aa4.38□□□□□ -1.71
MECP2-218ENST00000629277 MT4P47944 62 aa4.32□□□□□ -1.72
MECP2-218ENST00000629277 KRTAP20-1Q3LI63 56 aa4.29□□□□□ -1.72
MECP2-218ENST00000629277 LCE1FQ5T754 118 aa4.19□□□□□ -1.74
MECP2-218ENST00000629277 MUC5ACP98088 5654 aa4.19□□□□□ -1.74
MECP2-218ENST00000629277 KRTAP20-2Q3LI61 65 aa4.18□□□□□ -1.74
MECP2-218ENST00000629277 HMCN1Q96RW7 5635 aa4.15□□□□□ -1.75
MECP2-218ENST00000629277 KRTAP5-2Q701N4 177 aa4.14□□□□□ -1.75
MECP2-218ENST00000629277 LCE4AQ5TA78 99 aa3.97□□□□□ -1.77
MECP2-218ENST00000629277 KRTAP4-11Q9BYQ6 195 aa3.97□□□□□ -1.77
MECP2-218ENST00000629277 LCE1BQ5T7P3 118 aa3.94□□□□□ -1.78
MECP2-218ENST00000629277 KRTAP5-3Q6L8H2 238 aa3.94□□□□□ -1.78
MECP2-218ENST00000629277 KRTAP5-10Q6L8G5 202 aa3.89□□□□□ -1.79
MECP2-218ENST00000629277 KRTAP5-1Q6L8H4 278 aa3.76□□□□□ -1.81
MECP2-218ENST00000629277 KRTAP4-2Q9BYR5 136 aa3.67□□□□□ -1.82
MECP2-218ENST00000629277 GPR98Q8WXG9 6306 aa3.65□□□□□ -1.83
MECP2-218ENST00000629277 LCE1CQ5T751 118 aa3.58□□□□□ -1.84
MECP2-218ENST00000629277 KRTAP9-9Q9BYP9 154 aa3.55□□□□□ -1.84
MECP2-218ENST00000629277 KRTAP21-2Q3LI59 83 aa3.51□□□□□ -1.85
MECP2-218ENST00000629277 AHNAK2Q8IVF2 5795 aa3.47□□□□□ -1.85
MECP2-218ENST00000629277 MUC19Q7Z5P9 8384 aa3.38□□□□□ -1.87
MECP2-218ENST00000629277 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.36□□□□□ -1.87
MECP2-218ENST00000629277 KRTAP4-4Q9BYR3 166 aa3.36□□□□□ -1.87
MECP2-218ENST00000629277 KRTAP4-12Q9BQ66 201 aa3.31□□□□□ -1.88
MECP2-218ENST00000629277 KRTAP21-1Q3LI58 79 aa3.26□□□□□ -1.89
MECP2-218ENST00000629277 KRTAP5-8O75690 187 aa3.23□□□□□ -1.89
MECP2-218ENST00000629277 KRTAP5-7Q6L8G8 165 aa3.16□□□□□ -1.9
MECP2-218ENST00000629277 MUC5BQ9HC84 5762 aaPredicted RBP3.15□□□□□ -1.9
MECP2-218ENST00000629277 KRTAP5-11Q6L8G4 156 aa3.04□□□□□ -1.92
MECP2-218ENST00000629277 AHNAKQ09666 5890 aaKnown RBP2.82□□□□□ -1.96
MECP2-218ENST00000629277 PHGR1C9JFL3 82 aa2.66□□□□□ -1.98
MECP2-218ENST00000629277 MUC16Q8WXI7 14507 aa1.81□□□□□ -2.12
Retrieved 78 of 20,778 RNA–protein pairs in 86.5 ms