RNA–Protein interactions for RNA: ENST00000625463.1

CHD2-204, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 1 (best)

Gene CHD2, Length 340 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-204ENST00000625463 KRTAP5-5Q701N2 237 aaPredicted RBP1.49□□□□□ -2.17
CHD2-204ENST00000625463 MT1XP80297 61 aa1.48□□□□□ -2.17
CHD2-204ENST00000625463 KRTAP4-4Q9BYR3 166 aa1.46□□□□□ -2.18
CHD2-204ENST00000625463 LRP2P98164 4655 aa1.45□□□□□ -2.18
CHD2-204ENST00000625463 MT1EP04732 61 aa1.45□□□□□ -2.18
CHD2-204ENST00000625463 DNHD1Q96M86 4753 aa1.45□□□□□ -2.18
CHD2-204ENST00000625463 MT1HL1P0DM35 61 aa1.43□□□□□ -2.18
CHD2-204ENST00000625463 OBSCNQ5VST9 7968 aa1.42□□□□□ -2.18
CHD2-204ENST00000625463 KRTAP5-9P26371 169 aa1.42□□□□□ -2.18
CHD2-204ENST00000625463 KRTAP5-4Q6L8H1 288 aa1.42□□□□□ -2.18
CHD2-204ENST00000625463 MT1LQ93083 61 aa1.42□□□□□ -2.18
CHD2-204ENST00000625463 KRTAP4-1Q9BYQ7 146 aa1.41□□□□□ -2.18
CHD2-204ENST00000625463 SYNE1Q8NF91 8797 aaKnown RBP1.39□□□□□ -2.19
CHD2-204ENST00000625463 KRTAP6-2Q3LI66 62 aa1.38□□□□□ -2.19
CHD2-204ENST00000625463 MT1BP07438 61 aa1.37□□□□□ -2.19
CHD2-204ENST00000625463 HYDINQ4G0P3 5121 aa1.36□□□□□ -2.19
CHD2-204ENST00000625463 SPRR2AP35326 72 aa1.35□□□□□ -2.19
CHD2-204ENST00000625463 SPRR2FQ96RM1 72 aa1.35□□□□□ -2.19
CHD2-204ENST00000625463 SPRR2BP35325 72 aa1.34□□□□□ -2.19
CHD2-204ENST00000625463 KRTAP4-3Q9BYR4 195 aa1.34□□□□□ -2.19
CHD2-204ENST00000625463 SPRR2DP22532 72 aa1.32□□□□□ -2.2
CHD2-204ENST00000625463 KRTAP19-7Q3SYF9 63 aa1.31□□□□□ -2.2
CHD2-204ENST00000625463 LCE1CQ5T751 118 aa1.31□□□□□ -2.2
CHD2-204ENST00000625463 LCE1BQ5T7P3 118 aa1.31□□□□□ -2.2
CHD2-204ENST00000625463 HMCN2Q8NDA2 5059 aa1.3□□□□□ -2.2
CHD2-204ENST00000625463 RYR1P21817 5038 aa1.29□□□□□ -2.2
CHD2-204ENST00000625463 BIRC6Q9NR09 4857 aa1.28□□□□□ -2.2
CHD2-204ENST00000625463 MUC2Q02817 5179 aa1.28□□□□□ -2.2
CHD2-204ENST00000625463 MT2AP02795 61 aa1.28□□□□□ -2.2
CHD2-204ENST00000625463 MT1HP80294 61 aa1.28□□□□□ -2.2
CHD2-204ENST00000625463 MT1FP04733 61 aa1.27□□□□□ -2.21
CHD2-204ENST00000625463 SPRR2EP22531 72 aa1.27□□□□□ -2.21
CHD2-204ENST00000625463 KMT2CQ8NEZ4 4911 aaKnown RBP1.27□□□□□ -2.21
CHD2-204ENST00000625463 MT1GP13640 62 aa1.25□□□□□ -2.21
CHD2-204ENST00000625463 RYR3Q15413 4870 aa1.24□□□□□ -2.21
CHD2-204ENST00000625463 UBR4Q5T4S7 5183 aa1.23□□□□□ -2.21
CHD2-204ENST00000625463 PCLOQ9Y6V0 5065 aa1.22□□□□□ -2.21
CHD2-204ENST00000625463 HERC2O95714 4834 aa1.22□□□□□ -2.21
CHD2-204ENST00000625463 KRTAP19-3Q7Z4W3 81 aa1.21□□□□□ -2.22
CHD2-204ENST00000625463 EPPK1P58107 5090 aaKnown RBP1.21□□□□□ -2.22
CHD2-204ENST00000625463 CRCT1Q9UGL9 99 aa1.18□□□□□ -2.22
CHD2-204ENST00000625463 RYR2Q92736 4967 aa1.18□□□□□ -2.22
CHD2-204ENST00000625463 KRTAP5-2Q701N4 177 aa1.17□□□□□ -2.22
CHD2-204ENST00000625463 KIAA1109Q2LD37 5005 aa1.16□□□□□ -2.22
CHD2-204ENST00000625463 MT1MQ8N339 61 aa1.15□□□□□ -2.23
CHD2-204ENST00000625463 MUC19Q7Z5P9 8384 aa1.13□□□□□ -2.23
CHD2-204ENST00000625463 KRTAP5-7Q6L8G8 165 aa1.13□□□□□ -2.23
CHD2-204ENST00000625463 KRTAP21-1Q3LI58 79 aa1.12□□□□□ -2.23
CHD2-204ENST00000625463 KRTAP6-1Q3LI64 71 aa1.11□□□□□ -2.23
CHD2-204ENST00000625463 ABCA13Q86UQ4 5058 aa1.1□□□□□ -2.23
CHD2-204ENST00000625463 USH2AO75445 5202 aa1.08□□□□□ -2.24
CHD2-204ENST00000625463 FAT4Q6V0I7 4981 aa1.05□□□□□ -2.24
CHD2-204ENST00000625463 RNF213Q63HN8 5207 aa1.05□□□□□ -2.24
CHD2-204ENST00000625463 FSIP2Q5CZC0 6907 aa1.05□□□□□ -2.24
CHD2-204ENST00000625463 KRTAP5-8O75690 187 aa1.04□□□□□ -2.24
CHD2-204ENST00000625463 SSPOA2VEC9 5147 aa1□□□□□ -2.25
CHD2-204ENST00000625463 KRTAP20-1Q3LI63 56 aa0.97□□□□□ -2.25
CHD2-204ENST00000625463 KRTAP5-10Q6L8G5 202 aa0.96□□□□□ -2.26
CHD2-204ENST00000625463 MDN1Q9NU22 5596 aa0.96□□□□□ -2.26
CHD2-204ENST00000625463 KRTAP21-2Q3LI59 83 aa0.94□□□□□ -2.26
CHD2-204ENST00000625463 FCGBPQ9Y6R7 5405 aaPredicted RBP0.9□□□□□ -2.26
CHD2-204ENST00000625463 KMT2DO14686 5537 aa0.9□□□□□ -2.26
CHD2-204ENST00000625463 MACF1Q9UPN3 7388 aaKnown RBP0.89□□□□□ -2.27
CHD2-204ENST00000625463 SYNE2Q8WXH0 6885 aaKnown RBP0.88□□□□□ -2.27
CHD2-204ENST00000625463 NEBP20929 6669 aa0.88□□□□□ -2.27
CHD2-204ENST00000625463 GPR98Q8WXG9 6306 aa0.86□□□□□ -2.27
CHD2-204ENST00000625463 MUC5ACP98088 5654 aa0.85□□□□□ -2.27
CHD2-204ENST00000625463 HMCN1Q96RW7 5635 aa0.82□□□□□ -2.28
CHD2-204ENST00000625463 DSTQ03001 7570 aaKnown RBP0.79□□□□□ -2.28
CHD2-204ENST00000625463 MUC12Q9UKN1 5478 aa0.78□□□□□ -2.28
CHD2-204ENST00000625463 KRTAP19-6Q3LI70 58 aa0.78□□□□□ -2.28
CHD2-204ENST00000625463 AHNAK2Q8IVF2 5795 aa0.76□□□□□ -2.29
CHD2-204ENST00000625463 AHNAKQ09666 5890 aaKnown RBP0.69□□□□□ -2.3
CHD2-204ENST00000625463 MUC5BQ9HC84 5762 aaPredicted RBP0.67□□□□□ -2.3
CHD2-204ENST00000625463 MT4P47944 62 aa0.67□□□□□ -2.3
CHD2-204ENST00000625463 MUC16Q8WXI7 14507 aa0.56□□□□□ -2.32
CHD2-204ENST00000625463 KRTAP20-2Q3LI61 65 aa0.53□□□□□ -2.32
CHD2-204ENST00000625463 PHGR1C9JFL3 82 aa0.47□□□□□ -2.33
Retrieved 78 of 20,778 RNA–protein pairs in 76.8 ms