RNA–Protein interactions for RNA: ENST00000624204.3

PMS1-221, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 3,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-221ENST00000624204 MUC12Q9UKN1 5478 aa5.09□□□□□ -1.59
PMS1-221ENST00000624204 KRTAP4-3Q9BYR4 195 aa5.09□□□□□ -1.59
PMS1-221ENST00000624204 KRTAP12-4P60329 112 aa5.05□□□□□ -1.6
PMS1-221ENST00000624204 MT1LQ93083 61 aa5.03□□□□□ -1.6
PMS1-221ENST00000624204 MT1GP13640 62 aa5.01□□□□□ -1.61
PMS1-221ENST00000624204 MT1EP04732 61 aa4.94□□□□□ -1.62
PMS1-221ENST00000624204 KRTAP4-9Q9BYQ8 210 aa4.9□□□□□ -1.62
PMS1-221ENST00000624204 KRTAP19-4Q3LI73 84 aa4.86□□□□□ -1.63
PMS1-221ENST00000624204 LCE3BQ5TA77 95 aa4.85□□□□□ -1.63
PMS1-221ENST00000624204 SSPOA2VEC9 5147 aa4.83□□□□□ -1.64
PMS1-221ENST00000624204 SYNE2Q8WXH0 6885 aaKnown RBP4.81□□□□□ -1.64
PMS1-221ENST00000624204 MT1MQ8N339 61 aa4.6□□□□□ -1.67
PMS1-221ENST00000624204 KRTAP9-7A8MTY7 169 aa4.59□□□□□ -1.67
PMS1-221ENST00000624204 LCE2AQ5TA79 106 aaPredicted RBP4.57□□□□□ -1.68
PMS1-221ENST00000624204 LCE2DQ5TA82 110 aaPredicted RBP4.56□□□□□ -1.68
PMS1-221ENST00000624204 PRM1P04553 51 aa4.55□□□□□ -1.68
PMS1-221ENST00000624204 KRTAP19-3Q7Z4W3 81 aa4.53□□□□□ -1.68
PMS1-221ENST00000624204 KRTAP9-2Q9BYQ4 174 aa4.51□□□□□ -1.69
PMS1-221ENST00000624204 SPRR2FQ96RM1 72 aa4.46□□□□□ -1.69
PMS1-221ENST00000624204 LCE3DQ9BYE3 92 aa4.44□□□□□ -1.7
PMS1-221ENST00000624204 LCE3EQ5T5B0 92 aa4.4□□□□□ -1.7
PMS1-221ENST00000624204 MDN1Q9NU22 5596 aa4.37□□□□□ -1.71
PMS1-221ENST00000624204 KRTAP6-1Q3LI64 71 aa4.35□□□□□ -1.71
PMS1-221ENST00000624204 MT1AP04731 61 aa4.34□□□□□ -1.71
PMS1-221ENST00000624204 KRTAP5-5Q701N2 237 aaPredicted RBP4.34□□□□□ -1.71
PMS1-221ENST00000624204 KRTAP19-6Q3LI70 58 aa4.34□□□□□ -1.72
PMS1-221ENST00000624204 MACF1Q9UPN3 7388 aaKnown RBP4.32□□□□□ -1.72
PMS1-221ENST00000624204 LCE5AQ5TCM9 118 aa4.27□□□□□ -1.73
PMS1-221ENST00000624204 KRTAP6-2Q3LI66 62 aa4.18□□□□□ -1.74
PMS1-221ENST00000624204 KRTAP9-6A0A140TA67 174 aa4.16□□□□□ -1.74
PMS1-221ENST00000624204 KRTAP6-3Q3LI67 103 aa4.14□□□□□ -1.75
PMS1-221ENST00000624204 LCE1AQ5T7P2 110 aa4.05□□□□□ -1.76
PMS1-221ENST00000624204 KRTAP2-2Q9BYT5 123 aa3.95□□□□□ -1.78
PMS1-221ENST00000624204 KRTAP9-4Q9BYQ2 154 aa3.88□□□□□ -1.79
PMS1-221ENST00000624204 LCE1EQ5T753 118 aa3.87□□□□□ -1.79
PMS1-221ENST00000624204 SPRR2EP22531 72 aa3.85□□□□□ -1.79
PMS1-221ENST00000624204 SPRR2BP35325 72 aa3.85□□□□□ -1.79
PMS1-221ENST00000624204 SPRR2AP35326 72 aa3.85□□□□□ -1.79
PMS1-221ENST00000624204 MUC19Q7Z5P9 8384 aa3.78□□□□□ -1.8
PMS1-221ENST00000624204 MT3P25713 68 aa3.76□□□□□ -1.81
PMS1-221ENST00000624204 LCE1DQ5T752 114 aa3.64□□□□□ -1.83
PMS1-221ENST00000624204 SPRR2DP22532 72 aa3.61□□□□□ -1.83
PMS1-221ENST00000624204 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.61□□□□□ -1.83
PMS1-221ENST00000624204 KRTAP4-11Q9BYQ6 195 aa3.52□□□□□ -1.85
PMS1-221ENST00000624204 KRTAP5-9P26371 169 aa3.51□□□□□ -1.85
PMS1-221ENST00000624204 MT4P47944 62 aa3.5□□□□□ -1.85
PMS1-221ENST00000624204 LCE1BQ5T7P3 118 aa3.41□□□□□ -1.86
PMS1-221ENST00000624204 MUC5ACP98088 5654 aa3.37□□□□□ -1.87
PMS1-221ENST00000624204 KRTAP4-6Q9BYQ5 205 aa3.37□□□□□ -1.87
PMS1-221ENST00000624204 NEBP20929 6669 aa3.28□□□□□ -1.88
PMS1-221ENST00000624204 KRTAP5-4Q6L8H1 288 aa3.17□□□□□ -1.9
PMS1-221ENST00000624204 HMCN1Q96RW7 5635 aa3.14□□□□□ -1.91
PMS1-221ENST00000624204 KRTAP5-10Q6L8G5 202 aa3.11□□□□□ -1.91
PMS1-221ENST00000624204 KRTAP20-1Q3LI63 56 aa3.1□□□□□ -1.91
PMS1-221ENST00000624204 KRTAP20-2Q3LI61 65 aa3.07□□□□□ -1.92
PMS1-221ENST00000624204 KRTAP5-2Q701N4 177 aa3.02□□□□□ -1.93
PMS1-221ENST00000624204 KRTAP4-4Q9BYR3 166 aa3□□□□□ -1.93
PMS1-221ENST00000624204 LCE1FQ5T754 118 aa2.93□□□□□ -1.94
PMS1-221ENST00000624204 KRTAP5-1Q6L8H4 278 aa2.91□□□□□ -1.94
PMS1-221ENST00000624204 LCE4AQ5TA78 99 aa2.84□□□□□ -1.95
PMS1-221ENST00000624204 KRTAP5-3Q6L8H2 238 aa2.81□□□□□ -1.96
PMS1-221ENST00000624204 KRTAP4-2Q9BYR5 136 aa2.75□□□□□ -1.97
PMS1-221ENST00000624204 KRTAP21-1Q3LI58 79 aa2.73□□□□□ -1.97
PMS1-221ENST00000624204 KRTAP21-2Q3LI59 83 aa2.7□□□□□ -1.98
PMS1-221ENST00000624204 LCE1CQ5T751 118 aa2.7□□□□□ -1.98
PMS1-221ENST00000624204 MUC5BQ9HC84 5762 aaPredicted RBP2.68□□□□□ -1.98
PMS1-221ENST00000624204 KRTAP4-12Q9BQ66 201 aa2.64□□□□□ -1.99
PMS1-221ENST00000624204 AHNAK2Q8IVF2 5795 aa2.52□□□□□ -2.01
PMS1-221ENST00000624204 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.49□□□□□ -2.01
PMS1-221ENST00000624204 KRTAP5-7Q6L8G8 165 aa2.46□□□□□ -2.01
PMS1-221ENST00000624204 GPR98Q8WXG9 6306 aa2.45□□□□□ -2.02
PMS1-221ENST00000624204 KRTAP9-9Q9BYP9 154 aa2.29□□□□□ -2.04
PMS1-221ENST00000624204 KRTAP5-11Q6L8G4 156 aa2.25□□□□□ -2.05
PMS1-221ENST00000624204 KRTAP5-8O75690 187 aa2.25□□□□□ -2.05
PMS1-221ENST00000624204 AHNAKQ09666 5890 aaKnown RBP2.11□□□□□ -2.07
PMS1-221ENST00000624204 PHGR1C9JFL3 82 aa1.98□□□□□ -2.09
PMS1-221ENST00000624204 MUC16Q8WXI7 14507 aa1.43□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 320.1 ms