RNA–Protein interactions for RNA: ENST00000622768.4

GRIA3-209, Transcript of glutamate ionotropic receptor AMPA type subunit 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene GRIA3, Length 5,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA3-209ENST00000622768 LCE3BQ5TA77 95 aa3.38□□□□□ -1.87
GRIA3-209ENST00000622768 LCE1AQ5T7P2 110 aa3.37□□□□□ -1.87
GRIA3-209ENST00000622768 KRTAP19-3Q7Z4W3 81 aa3.33□□□□□ -1.88
GRIA3-209ENST00000622768 KRTAP2-2Q9BYT5 123 aa3.31□□□□□ -1.88
GRIA3-209ENST00000622768 KRTAP2-1Q9BYU5 128 aa3.31□□□□□ -1.88
GRIA3-209ENST00000622768 LCE3CQ5T5A8 94 aa3.25□□□□□ -1.89
GRIA3-209ENST00000622768 MUC2Q02817 5179 aa3.23□□□□□ -1.89
GRIA3-209ENST00000622768 KRTAP4-8A0A0G2JLE6 195 aa3.22□□□□□ -1.89
GRIA3-209ENST00000622768 KRTAP4-8Q9BYQ9 185 aa3.22□□□□□ -1.89
GRIA3-209ENST00000622768 MT1EP04732 61 aa3.2□□□□□ -1.9
GRIA3-209ENST00000622768 LCE4AQ5TA78 99 aa3.18□□□□□ -1.9
GRIA3-209ENST00000622768 MT1LQ93083 61 aa3.12□□□□□ -1.91
GRIA3-209ENST00000622768 MT1MQ8N339 61 aa3.1□□□□□ -1.91
GRIA3-209ENST00000622768 MT4P47944 62 aa3.1□□□□□ -1.91
GRIA3-209ENST00000622768 KRTAP5-9P26371 169 aa3.09□□□□□ -1.91
GRIA3-209ENST00000622768 SYNE2Q8WXH0 6885 aaKnown RBP3.06□□□□□ -1.92
GRIA3-209ENST00000622768 LOC100996750A0A140TA64 210 aa3.02□□□□□ -1.93
GRIA3-209ENST00000622768 KRTAP4-6Q9BYQ5 205 aa3.02□□□□□ -1.93
GRIA3-209ENST00000622768 SSPOA2VEC9 5147 aa3□□□□□ -1.93
GRIA3-209ENST00000622768 SPRR5A0A1B0GTR4 108 aa2.97□□□□□ -1.93
GRIA3-209ENST00000622768 NEBP20929 6669 aa2.96□□□□□ -1.94
GRIA3-209ENST00000622768 MT3P25713 68 aa2.95□□□□□ -1.94
GRIA3-209ENST00000622768 KRTAP19-7Q3SYF9 63 aa2.94□□□□□ -1.94
GRIA3-209ENST00000622768 LCE5AQ5TCM9 118 aa2.94□□□□□ -1.94
GRIA3-209ENST00000622768 FSIP2Q5CZC0 6907 aa2.93□□□□□ -1.94
GRIA3-209ENST00000622768 USH2AO75445 5202 aa2.93□□□□□ -1.94
GRIA3-209ENST00000622768 MT1AP04731 61 aa2.87□□□□□ -1.95
GRIA3-209ENST00000622768 KRTAP4-9Q9BYQ8 210 aa2.83□□□□□ -1.96
GRIA3-209ENST00000622768 FCGBPQ9Y6R7 5405 aaPredicted RBP2.75□□□□□ -1.97
GRIA3-209ENST00000622768 KRTAP4-7Q9BYR0 210 aa2.74□□□□□ -1.97
GRIA3-209ENST00000622768 KRTAP4-3Q9BYR4 195 aa2.72□□□□□ -1.97
GRIA3-209ENST00000622768 LCE3DQ9BYE3 92 aa2.71□□□□□ -1.98
GRIA3-209ENST00000622768 MACF1Q9UPN3 7388 aaKnown RBP2.69□□□□□ -1.98
GRIA3-209ENST00000622768 LCE1DQ5T752 114 aa2.69□□□□□ -1.98
GRIA3-209ENST00000622768 KRTAP9-4Q9BYQ2 154 aa2.67□□□□□ -1.98
GRIA3-209ENST00000622768 KRTAP9-9Q9BYP9 154 aa2.66□□□□□ -1.98
GRIA3-209ENST00000622768 LCE3EQ5T5B0 92 aa2.64□□□□□ -1.99
GRIA3-209ENST00000622768 KRTAP5-4Q6L8H1 288 aa2.6□□□□□ -1.99
GRIA3-209ENST00000622768 LCE1BQ5T7P3 118 aa2.59□□□□□ -1.99
GRIA3-209ENST00000622768 GPR98Q8WXG9 6306 aa2.55□□□□□ -2
GRIA3-209ENST00000622768 KRTAP20-2Q3LI61 65 aa2.55□□□□□ -2
GRIA3-209ENST00000622768 KRTAP6-2Q3LI66 62 aa2.55□□□□□ -2
GRIA3-209ENST00000622768 KRTAP6-1Q3LI64 71 aa2.53□□□□□ -2
GRIA3-209ENST00000622768 KRTAP9-6A8MVA2 160 aa2.52□□□□□ -2.01
GRIA3-209ENST00000622768 KMT2DO14686 5537 aa2.49□□□□□ -2.01
GRIA3-209ENST00000622768 MDN1Q9NU22 5596 aa2.39□□□□□ -2.03
GRIA3-209ENST00000622768 KRTAP5-3Q6L8H2 238 aa2.38□□□□□ -2.03
GRIA3-209ENST00000622768 KRTAP4-2Q9BYR5 136 aa2.37□□□□□ -2.03
GRIA3-209ENST00000622768 KRTAP5-5Q701N2 237 aaPredicted RBP2.37□□□□□ -2.03
GRIA3-209ENST00000622768 KRTAP4-11Q9BYQ6 195 aa2.36□□□□□ -2.03
GRIA3-209ENST00000622768 MUC12Q9UKN1 5478 aa2.36□□□□□ -2.03
GRIA3-209ENST00000622768 LCE1CQ5T751 118 aa2.27□□□□□ -2.05
GRIA3-209ENST00000622768 LCE1EQ5T753 118 aa2.27□□□□□ -2.05
GRIA3-209ENST00000622768 LCE1FQ5T754 118 aa2.27□□□□□ -2.05
GRIA3-209ENST00000622768 KRTAP4-12Q9BQ66 201 aa2.26□□□□□ -2.05
GRIA3-209ENST00000622768 SYNE1Q8NF91 8797 aaKnown RBP2.22□□□□□ -2.05
GRIA3-209ENST00000622768 HMCN1Q96RW7 5635 aa2.22□□□□□ -2.05
GRIA3-209ENST00000622768 KRTAP5-2Q701N4 177 aa2.21□□□□□ -2.06
GRIA3-209ENST00000622768 AHNAK2Q8IVF2 5795 aa2.19□□□□□ -2.06
GRIA3-209ENST00000622768 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.17□□□□□ -2.06
GRIA3-209ENST00000622768 DSTQ03001 7570 aaKnown RBP2.16□□□□□ -2.06
GRIA3-209ENST00000622768 OBSCNQ5VST9 7968 aa2.16□□□□□ -2.06
GRIA3-209ENST00000622768 KRTAP5-7Q6L8G8 165 aa2.15□□□□□ -2.07
GRIA3-209ENST00000622768 KRTAP5-10Q6L8G5 202 aa2.08□□□□□ -2.08
GRIA3-209ENST00000622768 PRM1P04553 51 aa2.06□□□□□ -2.08
GRIA3-209ENST00000622768 KRTAP5-8O75690 187 aa2.05□□□□□ -2.08
GRIA3-209ENST00000622768 MUC5ACP98088 5654 aa2.03□□□□□ -2.09
GRIA3-209ENST00000622768 AHNAKQ09666 5890 aaKnown RBP2□□□□□ -2.09
GRIA3-209ENST00000622768 KRTAP5-1Q6L8H4 278 aa1.77□□□□□ -2.13
GRIA3-209ENST00000622768 MUC5BQ9HC84 5762 aaPredicted RBP1.76□□□□□ -2.13
GRIA3-209ENST00000622768 PHGR1C9JFL3 82 aa1.75□□□□□ -2.13
GRIA3-209ENST00000622768 KRTAP5-11Q6L8G4 156 aa1.74□□□□□ -2.13
GRIA3-209ENST00000622768 MUC19Q7Z5P9 8384 aa1.68□□□□□ -2.14
GRIA3-209ENST00000622768 KRTAP4-4Q9BYR3 166 aa1.65□□□□□ -2.15
GRIA3-209ENST00000622768 KRTAP21-2Q3LI59 83 aa1.51□□□□□ -2.17
GRIA3-209ENST00000622768 KRTAP21-1Q3LI58 79 aa1.42□□□□□ -2.18
GRIA3-209ENST00000622768 MUC16Q8WXI7 14507 aa0.96□□□□□ -2.26
Retrieved 77 of 20,778 RNA–protein pairs in 176.8 ms