RNA–Protein interactions for RNA: ENST00000622668.4

HDAC9-229, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-229ENST00000622668 USH2AO75445 5202 aa3.2□□□□□ -1.9
HDAC9-229ENST00000622668 KMT2DO14686 5537 aa3.2□□□□□ -1.9
HDAC9-229ENST00000622668 KRTAP19-3Q7Z4W3 81 aa3.19□□□□□ -1.9
HDAC9-229ENST00000622668 OBSCNQ5VST9 7968 aa3.18□□□□□ -1.9
HDAC9-229ENST00000622668 KRTAP12-4P60329 112 aa3.18□□□□□ -1.9
HDAC9-229ENST00000622668 KRTAP20-1Q3LI63 56 aa3.15□□□□□ -1.91
HDAC9-229ENST00000622668 KRTAP6-3Q3LI67 103 aa3.15□□□□□ -1.91
HDAC9-229ENST00000622668 LCE3BQ5TA77 95 aa3.14□□□□□ -1.91
HDAC9-229ENST00000622668 KRTAP19-4Q3LI73 84 aa3.13□□□□□ -1.91
HDAC9-229ENST00000622668 MT1EP04732 61 aa3.12□□□□□ -1.91
HDAC9-229ENST00000622668 DSTQ03001 7570 aaKnown RBP3.12□□□□□ -1.91
HDAC9-229ENST00000622668 MT4P47944 62 aa3.1□□□□□ -1.91
HDAC9-229ENST00000622668 MACF1Q9UPN3 7388 aaKnown RBP3.09□□□□□ -1.91
HDAC9-229ENST00000622668 MT1LQ93083 61 aa3.07□□□□□ -1.92
HDAC9-229ENST00000622668 KRTAP4-7Q9BYR0 210 aa3.07□□□□□ -1.92
HDAC9-229ENST00000622668 FCGBPQ9Y6R7 5405 aaPredicted RBP3.05□□□□□ -1.92
HDAC9-229ENST00000622668 MT1MQ8N339 61 aa3.02□□□□□ -1.93
HDAC9-229ENST00000622668 KRTAP2-3P0C7H8 128 aa3.02□□□□□ -1.93
HDAC9-229ENST00000622668 KRTAP2-4Q9BYR9 128 aa3.02□□□□□ -1.93
HDAC9-229ENST00000622668 SSPOA2VEC9 5147 aa3.01□□□□□ -1.93
HDAC9-229ENST00000622668 KRTAP4-3Q9BYR4 195 aa2.98□□□□□ -1.93
HDAC9-229ENST00000622668 KRTAP19-7Q3SYF9 63 aa2.96□□□□□ -1.93
HDAC9-229ENST00000622668 LCE1AQ5T7P2 110 aa2.95□□□□□ -1.94
HDAC9-229ENST00000622668 KRTAP2-2Q9BYT5 123 aa2.94□□□□□ -1.94
HDAC9-229ENST00000622668 KRTAP2-1Q9BYU5 128 aa2.94□□□□□ -1.94
HDAC9-229ENST00000622668 SPRR5A0A1B0GTR4 108 aa2.92□□□□□ -1.94
HDAC9-229ENST00000622668 MDN1Q9NU22 5596 aa2.91□□□□□ -1.94
HDAC9-229ENST00000622668 KRTAP4-9Q9BYQ8 210 aa2.89□□□□□ -1.95
HDAC9-229ENST00000622668 NEBP20929 6669 aa2.88□□□□□ -1.95
HDAC9-229ENST00000622668 LOC100996750A0A140TA64 210 aa2.88□□□□□ -1.95
HDAC9-229ENST00000622668 MUC12Q9UKN1 5478 aa2.87□□□□□ -1.95
HDAC9-229ENST00000622668 KRTAP4-6Q9BYQ5 205 aa2.85□□□□□ -1.95
HDAC9-229ENST00000622668 INE1O15225 51 aa2.82□□□□□ -1.96
HDAC9-229ENST00000622668 LCE5AQ5TCM9 118 aa2.8□□□□□ -1.96
HDAC9-229ENST00000622668 MT3P25713 68 aa2.78□□□□□ -1.96
HDAC9-229ENST00000622668 GPR98Q8WXG9 6306 aa2.76□□□□□ -1.97
HDAC9-229ENST00000622668 KRTAP5-9P26371 169 aa2.75□□□□□ -1.97
HDAC9-229ENST00000622668 LCE4AQ5TA78 99 aa2.73□□□□□ -1.97
HDAC9-229ENST00000622668 LCE3DQ9BYE3 92 aa2.72□□□□□ -1.97
HDAC9-229ENST00000622668 LCE1DQ5T752 114 aa2.72□□□□□ -1.97
HDAC9-229ENST00000622668 MT1AP04731 61 aa2.7□□□□□ -1.98
HDAC9-229ENST00000622668 LCE1BQ5T7P3 118 aa2.69□□□□□ -1.98
HDAC9-229ENST00000622668 LCE3EQ5T5B0 92 aa2.63□□□□□ -1.99
HDAC9-229ENST00000622668 KRTAP6-1Q3LI64 71 aa2.6□□□□□ -1.99
HDAC9-229ENST00000622668 KRTAP6-2Q3LI66 62 aa2.58□□□□□ -2
HDAC9-229ENST00000622668 KRTAP9-6A8MVA2 160 aa2.51□□□□□ -2.01
HDAC9-229ENST00000622668 KRTAP9-4Q9BYQ2 154 aa2.51□□□□□ -2.01
HDAC9-229ENST00000622668 KRTAP20-2Q3LI61 65 aa2.39□□□□□ -2.03
HDAC9-229ENST00000622668 KRTAP9-9Q9BYP9 154 aa2.37□□□□□ -2.03
HDAC9-229ENST00000622668 MUC19Q7Z5P9 8384 aa2.35□□□□□ -2.03
HDAC9-229ENST00000622668 LCE1CQ5T751 118 aa2.27□□□□□ -2.05
HDAC9-229ENST00000622668 LCE1EQ5T753 118 aa2.27□□□□□ -2.05
HDAC9-229ENST00000622668 LCE1FQ5T754 118 aa2.27□□□□□ -2.05
HDAC9-229ENST00000622668 KRTAP4-12Q9BQ66 201 aa2.27□□□□□ -2.05
HDAC9-229ENST00000622668 PRM1P04553 51 aa2.26□□□□□ -2.05
HDAC9-229ENST00000622668 KRTAP5-4Q6L8H1 288 aa2.24□□□□□ -2.05
HDAC9-229ENST00000622668 KRTAP4-11Q9BYQ6 195 aa2.23□□□□□ -2.05
HDAC9-229ENST00000622668 KRTAP5-3Q6L8H2 238 aa2.21□□□□□ -2.06
HDAC9-229ENST00000622668 MUC5ACP98088 5654 aa2.21□□□□□ -2.06
HDAC9-229ENST00000622668 HMCN1Q96RW7 5635 aa2.18□□□□□ -2.06
HDAC9-229ENST00000622668 KRTAP4-2Q9BYR5 136 aa2.16□□□□□ -2.06
HDAC9-229ENST00000622668 AHNAK2Q8IVF2 5795 aa2.14□□□□□ -2.07
HDAC9-229ENST00000622668 KRTAP5-5Q701N2 237 aaPredicted RBP2.1□□□□□ -2.07
HDAC9-229ENST00000622668 KRTAP5-8O75690 187 aa1.98□□□□□ -2.09
HDAC9-229ENST00000622668 KRTAP4-4Q9BYR3 166 aa1.91□□□□□ -2.1
HDAC9-229ENST00000622668 AHNAKQ09666 5890 aaKnown RBP1.83□□□□□ -2.12
HDAC9-229ENST00000622668 KRTAP5-2Q701N4 177 aa1.83□□□□□ -2.12
HDAC9-229ENST00000622668 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.82□□□□□ -2.12
HDAC9-229ENST00000622668 KRTAP5-10Q6L8G5 202 aa1.8□□□□□ -2.12
HDAC9-229ENST00000622668 MUC5BQ9HC84 5762 aaPredicted RBP1.73□□□□□ -2.13
HDAC9-229ENST00000622668 KRTAP5-7Q6L8G8 165 aa1.71□□□□□ -2.13
HDAC9-229ENST00000622668 KRTAP5-1Q6L8H4 278 aa1.67□□□□□ -2.14
HDAC9-229ENST00000622668 PHGR1C9JFL3 82 aa1.64□□□□□ -2.15
HDAC9-229ENST00000622668 KRTAP5-11Q6L8G4 156 aa1.54□□□□□ -2.16
HDAC9-229ENST00000622668 KRTAP21-2Q3LI59 83 aa1.41□□□□□ -2.18
HDAC9-229ENST00000622668 KRTAP21-1Q3LI58 79 aa1.12□□□□□ -2.23
HDAC9-229ENST00000622668 MUC16Q8WXI7 14507 aa0.95□□□□□ -2.26
Retrieved 77 of 20,778 RNA–protein pairs in 37 ms