RNA–Protein interactions for RNA: ENST00000622445.4

CACNB1-212, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 5 BASIC

Gene CACNB1, Length 3,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-212ENST00000622445 KRTAP4-3Q9BYR4 195 aa4.46□□□□□ -1.7
CACNB1-212ENST00000622445 LOC100996750A0A140TA64 210 aa4.45□□□□□ -1.7
CACNB1-212ENST00000622445 KRTAP19-7Q3SYF9 63 aa4.41□□□□□ -1.7
CACNB1-212ENST00000622445 SYNE2Q8WXH0 6885 aaKnown RBP4.38□□□□□ -1.71
CACNB1-212ENST00000622445 MT1GP13640 62 aa4.37□□□□□ -1.71
CACNB1-212ENST00000622445 MT1LQ93083 61 aa4.31□□□□□ -1.72
CACNB1-212ENST00000622445 MT1EP04732 61 aa4.28□□□□□ -1.72
CACNB1-212ENST00000622445 KRTAP9-6A0A140TA67 174 aa4.26□□□□□ -1.73
CACNB1-212ENST00000622445 LCE3BQ5TA77 95 aa4.17□□□□□ -1.74
CACNB1-212ENST00000622445 KRTAP2-3P0C7H8 128 aa4.16□□□□□ -1.74
CACNB1-212ENST00000622445 KRTAP4-9Q9BYQ8 210 aa4.16□□□□□ -1.74
CACNB1-212ENST00000622445 KRTAP2-4Q9BYR9 128 aa4.16□□□□□ -1.74
CACNB1-212ENST00000622445 KRTAP2-1Q9BYU5 128 aa4.16□□□□□ -1.74
CACNB1-212ENST00000622445 SPRR2FQ96RM1 72 aa4.15□□□□□ -1.75
CACNB1-212ENST00000622445 KRTAP12-4P60329 112 aa4.15□□□□□ -1.75
CACNB1-212ENST00000622445 MACF1Q9UPN3 7388 aaKnown RBP4.11□□□□□ -1.75
CACNB1-212ENST00000622445 MDN1Q9NU22 5596 aa4.08□□□□□ -1.76
CACNB1-212ENST00000622445 MT1MQ8N339 61 aa4.03□□□□□ -1.76
CACNB1-212ENST00000622445 KRTAP19-3Q7Z4W3 81 aa3.99□□□□□ -1.77
CACNB1-212ENST00000622445 KRTAP19-6Q3LI70 58 aa3.92□□□□□ -1.78
CACNB1-212ENST00000622445 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.91□□□□□ -1.78
CACNB1-212ENST00000622445 KRTAP9-7A8MTY7 169 aa3.9□□□□□ -1.78
CACNB1-212ENST00000622445 KRTAP6-1Q3LI64 71 aa3.79□□□□□ -1.8
CACNB1-212ENST00000622445 LCE3DQ9BYE3 92 aa3.74□□□□□ -1.81
CACNB1-212ENST00000622445 LCE5AQ5TCM9 118 aa3.72□□□□□ -1.81
CACNB1-212ENST00000622445 KRTAP19-4Q3LI73 84 aa3.71□□□□□ -1.82
CACNB1-212ENST00000622445 PRM1P04553 51 aa3.7□□□□□ -1.82
CACNB1-212ENST00000622445 SPRR2EP22531 72 aa3.66□□□□□ -1.82
CACNB1-212ENST00000622445 SPRR2BP35325 72 aa3.66□□□□□ -1.82
CACNB1-212ENST00000622445 SPRR2AP35326 72 aa3.66□□□□□ -1.82
CACNB1-212ENST00000622445 LCE3EQ5T5B0 92 aa3.65□□□□□ -1.83
CACNB1-212ENST00000622445 KRTAP6-3Q3LI67 103 aa3.57□□□□□ -1.84
CACNB1-212ENST00000622445 MT1AP04731 61 aa3.53□□□□□ -1.85
CACNB1-212ENST00000622445 LCE1AQ5T7P2 110 aa3.52□□□□□ -1.85
CACNB1-212ENST00000622445 NEBP20929 6669 aa3.48□□□□□ -1.85
CACNB1-212ENST00000622445 KRTAP6-2Q3LI66 62 aa3.47□□□□□ -1.85
CACNB1-212ENST00000622445 SPRR2DP22532 72 aa3.46□□□□□ -1.86
CACNB1-212ENST00000622445 KRTAP5-5Q701N2 237 aaPredicted RBP3.45□□□□□ -1.86
CACNB1-212ENST00000622445 LCE1EQ5T753 118 aa3.43□□□□□ -1.86
CACNB1-212ENST00000622445 KRTAP20-1Q3LI63 56 aa3.42□□□□□ -1.86
CACNB1-212ENST00000622445 KRTAP5-9P26371 169 aa3.36□□□□□ -1.87
CACNB1-212ENST00000622445 MT4P47944 62 aa3.32□□□□□ -1.88
CACNB1-212ENST00000622445 KRTAP2-2Q9BYT5 123 aa3.32□□□□□ -1.88
CACNB1-212ENST00000622445 KRTAP9-4Q9BYQ2 154 aa3.32□□□□□ -1.88
CACNB1-212ENST00000622445 MT3P25713 68 aa3.27□□□□□ -1.89
CACNB1-212ENST00000622445 LCE1DQ5T752 114 aa3.22□□□□□ -1.89
CACNB1-212ENST00000622445 MUC19Q7Z5P9 8384 aa3.16□□□□□ -1.9
CACNB1-212ENST00000622445 KRTAP4-6Q9BYQ5 205 aa3.15□□□□□ -1.91
CACNB1-212ENST00000622445 LCE1FQ5T754 118 aa3.14□□□□□ -1.91
CACNB1-212ENST00000622445 LCE1BQ5T7P3 118 aa3.06□□□□□ -1.92
CACNB1-212ENST00000622445 LCE4AQ5TA78 99 aa3.03□□□□□ -1.93
CACNB1-212ENST00000622445 KRTAP9-9Q9BYP9 154 aa3.02□□□□□ -1.93
CACNB1-212ENST00000622445 HMCN1Q96RW7 5635 aa2.99□□□□□ -1.93
CACNB1-212ENST00000622445 GPR98Q8WXG9 6306 aa2.97□□□□□ -1.93
CACNB1-212ENST00000622445 MUC5ACP98088 5654 aa2.96□□□□□ -1.94
CACNB1-212ENST00000622445 KRTAP4-11Q9BYQ6 195 aa2.9□□□□□ -1.95
CACNB1-212ENST00000622445 KRTAP20-2Q3LI61 65 aa2.83□□□□□ -1.96
CACNB1-212ENST00000622445 KRTAP5-4Q6L8H1 288 aa2.71□□□□□ -1.98
CACNB1-212ENST00000622445 AHNAK2Q8IVF2 5795 aa2.67□□□□□ -1.98
CACNB1-212ENST00000622445 KRTAP4-4Q9BYR3 166 aa2.64□□□□□ -1.99
CACNB1-212ENST00000622445 KRTAP5-3Q6L8H2 238 aa2.6□□□□□ -1.99
CACNB1-212ENST00000622445 MUC5BQ9HC84 5762 aaPredicted RBP2.54□□□□□ -2
CACNB1-212ENST00000622445 KRTAP5-2Q701N4 177 aa2.53□□□□□ -2
CACNB1-212ENST00000622445 KRTAP5-10Q6L8G5 202 aa2.53□□□□□ -2.01
CACNB1-212ENST00000622445 KRTAP4-12Q9BQ66 201 aa2.44□□□□□ -2.02
CACNB1-212ENST00000622445 KRTAP4-2Q9BYR5 136 aa2.44□□□□□ -2.02
CACNB1-212ENST00000622445 KRTAP5-8O75690 187 aa2.35□□□□□ -2.03
CACNB1-212ENST00000622445 KRTAP5-7Q6L8G8 165 aa2.3□□□□□ -2.04
CACNB1-212ENST00000622445 KRTAP5-1Q6L8H4 278 aa2.29□□□□□ -2.04
CACNB1-212ENST00000622445 KRTAP21-2Q3LI59 83 aa2.27□□□□□ -2.05
CACNB1-212ENST00000622445 LCE1CQ5T751 118 aa2.26□□□□□ -2.05
CACNB1-212ENST00000622445 AHNAKQ09666 5890 aaKnown RBP2.24□□□□□ -2.05
CACNB1-212ENST00000622445 KRTAP21-1Q3LI58 79 aa1.99□□□□□ -2.09
CACNB1-212ENST00000622445 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.94□□□□□ -2.1
CACNB1-212ENST00000622445 KRTAP5-11Q6L8G4 156 aa1.89□□□□□ -2.11
CACNB1-212ENST00000622445 PHGR1C9JFL3 82 aa1.69□□□□□ -2.14
CACNB1-212ENST00000622445 MUC16Q8WXI7 14507 aa1.17□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 41.2 ms