RNA–Protein interactions for RNA: ENST00000622166.1

IGHV3-54-201, Transcript of immunoglobulin heavy variable 3-54 (pseudogene), humanhuman

BASIC

Gene IGHV3-54, Length 353 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-54-201ENST00000622166 CRCT1Q9UGL9 99 aa3.53□□□□□ -1.84
IGHV3-54-201ENST00000622166 INE1O15225 51 aa3.5□□□□□ -1.85
IGHV3-54-201ENST00000622166 KRTAP19-4Q3LI73 84 aa3.48□□□□□ -1.85
IGHV3-54-201ENST00000622166 KRTAP4-9Q9BYQ8 210 aa3.48□□□□□ -1.85
IGHV3-54-201ENST00000622166 KRTAP9-7A8MTY7 169 aa3.46□□□□□ -1.86
IGHV3-54-201ENST00000622166 KRTAP19-7Q3SYF9 63 aa3.44□□□□□ -1.86
IGHV3-54-201ENST00000622166 KRTAP9-6A8MVA2 160 aa3.37□□□□□ -1.87
IGHV3-54-201ENST00000622166 MT1EP04732 61 aa3.36□□□□□ -1.87
IGHV3-54-201ENST00000622166 MT1LQ93083 61 aa3.36□□□□□ -1.87
IGHV3-54-201ENST00000622166 KRTAP19-6Q3LI70 58 aa3.34□□□□□ -1.87
IGHV3-54-201ENST00000622166 KRTAP2-3P0C7H8 128 aa3.32□□□□□ -1.88
IGHV3-54-201ENST00000622166 KRTAP2-4Q9BYR9 128 aa3.32□□□□□ -1.88
IGHV3-54-201ENST00000622166 KRTAP2-1Q9BYU5 128 aa3.32□□□□□ -1.88
IGHV3-54-201ENST00000622166 USH2AO75445 5202 aa3.31□□□□□ -1.88
IGHV3-54-201ENST00000622166 KRTAP4-11Q9BYQ6 195 aa3.28□□□□□ -1.88
IGHV3-54-201ENST00000622166 SYNE2Q8WXH0 6885 aaKnown RBP3.28□□□□□ -1.88
IGHV3-54-201ENST00000622166 SSPOA2VEC9 5147 aa3.23□□□□□ -1.89
IGHV3-54-201ENST00000622166 KMT2DO14686 5537 aa3.15□□□□□ -1.91
IGHV3-54-201ENST00000622166 MT1GP13640 62 aa3.15□□□□□ -1.91
IGHV3-54-201ENST00000622166 MT1MQ8N339 61 aa3.14□□□□□ -1.91
IGHV3-54-201ENST00000622166 NEBP20929 6669 aa3.14□□□□□ -1.91
IGHV3-54-201ENST00000622166 KRTAP19-3Q7Z4W3 81 aa3.13□□□□□ -1.91
IGHV3-54-201ENST00000622166 MACF1Q9UPN3 7388 aaKnown RBP3.11□□□□□ -1.91
IGHV3-54-201ENST00000622166 KRTAP4-3Q9BYR4 195 aa3.1□□□□□ -1.91
IGHV3-54-201ENST00000622166 FCGBPQ9Y6R7 5405 aaPredicted RBP3.09□□□□□ -1.91
IGHV3-54-201ENST00000622166 LCE5AQ5TCM9 118 aa3.03□□□□□ -1.92
IGHV3-54-201ENST00000622166 KRTAP20-1Q3LI63 56 aa2.99□□□□□ -1.93
IGHV3-54-201ENST00000622166 GPR98Q8WXG9 6306 aa2.97□□□□□ -1.93
IGHV3-54-201ENST00000622166 SPRR2FQ96RM1 72 aa2.96□□□□□ -1.94
IGHV3-54-201ENST00000622166 MUC12Q9UKN1 5478 aa2.87□□□□□ -1.95
IGHV3-54-201ENST00000622166 MT1AP04731 61 aa2.86□□□□□ -1.95
IGHV3-54-201ENST00000622166 KRTAP6-3Q3LI67 103 aa2.86□□□□□ -1.95
IGHV3-54-201ENST00000622166 LCE4AQ5TA78 99 aa2.86□□□□□ -1.95
IGHV3-54-201ENST00000622166 KRTAP12-4P60329 112 aa2.85□□□□□ -1.95
IGHV3-54-201ENST00000622166 KRTAP5-9P26371 169 aa2.84□□□□□ -1.95
IGHV3-54-201ENST00000622166 KRTAP6-1Q3LI64 71 aa2.82□□□□□ -1.96
IGHV3-54-201ENST00000622166 LCE1AQ5T7P2 110 aa2.82□□□□□ -1.96
IGHV3-54-201ENST00000622166 MDN1Q9NU22 5596 aa2.79□□□□□ -1.96
IGHV3-54-201ENST00000622166 KRTAP5-5Q701N2 237 aaPredicted RBP2.79□□□□□ -1.96
IGHV3-54-201ENST00000622166 SPRR2EP22531 72 aa2.72□□□□□ -1.97
IGHV3-54-201ENST00000622166 SPRR2BP35325 72 aa2.72□□□□□ -1.97
IGHV3-54-201ENST00000622166 SPRR2AP35326 72 aa2.72□□□□□ -1.97
IGHV3-54-201ENST00000622166 LCE3DQ9BYE3 92 aa2.7□□□□□ -1.98
IGHV3-54-201ENST00000622166 LCE3EQ5T5B0 92 aa2.69□□□□□ -1.98
IGHV3-54-201ENST00000622166 SPRR2DP22532 72 aa2.61□□□□□ -1.99
IGHV3-54-201ENST00000622166 KRTAP2-2Q9BYT5 123 aa2.59□□□□□ -1.99
IGHV3-54-201ENST00000622166 SYNE1Q8NF91 8797 aaKnown RBP2.58□□□□□ -2
IGHV3-54-201ENST00000622166 MT3P25713 68 aa2.55□□□□□ -2
IGHV3-54-201ENST00000622166 DSTQ03001 7570 aaKnown RBP2.52□□□□□ -2.01
IGHV3-54-201ENST00000622166 AHNAK2Q8IVF2 5795 aa2.52□□□□□ -2.01
IGHV3-54-201ENST00000622166 PRM1P04553 51 aa2.52□□□□□ -2.01
IGHV3-54-201ENST00000622166 KRTAP6-2Q3LI66 62 aa2.52□□□□□ -2.01
IGHV3-54-201ENST00000622166 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.51□□□□□ -2.01
IGHV3-54-201ENST00000622166 KRTAP5-4Q6L8H1 288 aa2.48□□□□□ -2.01
IGHV3-54-201ENST00000622166 HMCN1Q96RW7 5635 aa2.36□□□□□ -2.03
IGHV3-54-201ENST00000622166 KRTAP5-2Q701N4 177 aa2.33□□□□□ -2.04
IGHV3-54-201ENST00000622166 AHNAKQ09666 5890 aaKnown RBP2.31□□□□□ -2.04
IGHV3-54-201ENST00000622166 KRTAP5-10Q6L8G5 202 aa2.3□□□□□ -2.04
IGHV3-54-201ENST00000622166 KRTAP20-2Q3LI61 65 aa2.29□□□□□ -2.04
IGHV3-54-201ENST00000622166 KRTAP5-7Q6L8G8 165 aa2.29□□□□□ -2.04
IGHV3-54-201ENST00000622166 MT4P47944 62 aa2.24□□□□□ -2.05
IGHV3-54-201ENST00000622166 KRTAP5-11Q6L8G4 156 aa2.22□□□□□ -2.05
IGHV3-54-201ENST00000622166 OBSCNQ5VST9 7968 aa2.18□□□□□ -2.06
IGHV3-54-201ENST00000622166 KRTAP5-1Q6L8H4 278 aa2.14□□□□□ -2.07
IGHV3-54-201ENST00000622166 MUC5BQ9HC84 5762 aaPredicted RBP2.14□□□□□ -2.07
IGHV3-54-201ENST00000622166 LCE1EQ5T753 118 aa2.12□□□□□ -2.07
IGHV3-54-201ENST00000622166 KRTAP4-4Q9BYR3 166 aa2.12□□□□□ -2.07
IGHV3-54-201ENST00000622166 MUC5ACP98088 5654 aa2.08□□□□□ -2.08
IGHV3-54-201ENST00000622166 LCE1CQ5T751 118 aa1.98□□□□□ -2.09
IGHV3-54-201ENST00000622166 LCE1BQ5T7P3 118 aa1.98□□□□□ -2.09
IGHV3-54-201ENST00000622166 KRTAP5-8O75690 187 aa1.86□□□□□ -2.11
IGHV3-54-201ENST00000622166 KRTAP21-2Q3LI59 83 aa1.84□□□□□ -2.11
IGHV3-54-201ENST00000622166 KRTAP21-1Q3LI58 79 aa1.64□□□□□ -2.15
IGHV3-54-201ENST00000622166 PHGR1C9JFL3 82 aa1.46□□□□□ -2.18
IGHV3-54-201ENST00000622166 LCE1FQ5T754 118 aa1.44□□□□□ -2.18
IGHV3-54-201ENST00000622166 MUC19Q7Z5P9 8384 aa1.29□□□□□ -2.2
IGHV3-54-201ENST00000622166 MUC16Q8WXI7 14507 aa1.03□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 47 ms