RNA–Protein interactions for RNA: ENST00000621573.1

TARDBP-224, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-224ENST00000621573 PSPHP1O15172 72 aa3.45□□□□□ -1.86
TARDBP-224ENST00000621573 KRTAP5-2Q701N4 177 aa3.41□□□□□ -1.86
TARDBP-224ENST00000621573 PRO2289Q9P1D8 64 aa3.41□□□□□ -1.86
TARDBP-224ENST00000621573 A0A1B0GU33 70 aa3.39□□□□□ -1.87
TARDBP-224ENST00000621573 KRTAP13-4Q3LI77 160 aa3.39□□□□□ -1.87
TARDBP-224ENST00000621573 MACF1Q9UPN3 7388 aaKnown RBP3.39□□□□□ -1.87
TARDBP-224ENST00000621573 A6NED7 52 aa3.38□□□□□ -1.87
TARDBP-224ENST00000621573 UQCR11O14957 56 aa3.38□□□□□ -1.87
TARDBP-224ENST00000621573 A0A0D9SG42 100 aa3.36□□□□□ -1.87
TARDBP-224ENST00000621573 MT1XP80297 61 aa3.36□□□□□ -1.87
TARDBP-224ENST00000621573 SPATA8Q6RVD6 105 aa3.36□□□□□ -1.87
TARDBP-224ENST00000621573 SYNE2Q8WXH0 6885 aaKnown RBP3.35□□□□□ -1.87
TARDBP-224ENST00000621573 MIR22HGQ0VDD5 57 aa3.33□□□□□ -1.88
TARDBP-224ENST00000621573 KRTAP6-3Q3LI67 103 aa3.33□□□□□ -1.88
TARDBP-224ENST00000621573 CAMK2N1Q7Z7J9 78 aa3.32□□□□□ -1.88
TARDBP-224ENST00000621573 BRK1Q8WUW1 75 aa3.32□□□□□ -1.88
TARDBP-224ENST00000621573 CDC42SE1Q9NRR8 79 aa3.31□□□□□ -1.88
TARDBP-224ENST00000621573 SPINT4Q6UDR6 99 aa3.3□□□□□ -1.88
TARDBP-224ENST00000621573 PP632Q6XCG6 107 aa3.29□□□□□ -1.88
TARDBP-224ENST00000621573 SPRR5A0A1B0GTR4 108 aa3.25□□□□□ -1.89
TARDBP-224ENST00000621573 K7ERS5 55 aa3.25□□□□□ -1.89
TARDBP-224ENST00000621573 KRTAP12-1P59990 96 aa3.25□□□□□ -1.89
TARDBP-224ENST00000621573 KRTAP20-1Q3LI63 56 aa3.23□□□□□ -1.89
TARDBP-224ENST00000621573 LCE1CQ5T751 118 aa3.23□□□□□ -1.89
TARDBP-224ENST00000621573 LCE1BQ5T7P3 118 aa3.23□□□□□ -1.89
TARDBP-224ENST00000621573 PRO0628Q9UI54 55 aa3.22□□□□□ -1.89
TARDBP-224ENST00000621573 KRTAP8-1Q8IUC2 63 aa3.21□□□□□ -1.9
TARDBP-224ENST00000621573 NEBP20929 6669 aa3.16□□□□□ -1.9
TARDBP-224ENST00000621573 SPRR2FQ96RM1 72 aa3.16□□□□□ -1.9
TARDBP-224ENST00000621573 MUC12Q9UKN1 5478 aa3.16□□□□□ -1.9
TARDBP-224ENST00000621573 PMAIP1Q13794 54 aa3.15□□□□□ -1.91
TARDBP-224ENST00000621573 KMT2DO14686 5537 aa3.14□□□□□ -1.91
TARDBP-224ENST00000621573 C10orf95Q9H7T3 257 aa3.1□□□□□ -1.91
TARDBP-224ENST00000621573 SPRR2EP22531 72 aa3.09□□□□□ -1.91
TARDBP-224ENST00000621573 SPRR2BP35325 72 aa3.09□□□□□ -1.91
TARDBP-224ENST00000621573 SPRR2AP35326 72 aa3.09□□□□□ -1.91
TARDBP-224ENST00000621573 TNP1P09430 55 aa3.08□□□□□ -1.92
TARDBP-224ENST00000621573 KRTAP2-3P0C7H8 128 aa3.05□□□□□ -1.92
TARDBP-224ENST00000621573 ROMO1P60602 79 aa3.05□□□□□ -1.92
TARDBP-224ENST00000621573 KRTAP2-4Q9BYR9 128 aa3.05□□□□□ -1.92
TARDBP-224ENST00000621573 MDN1Q9NU22 5596 aa3.03□□□□□ -1.92
TARDBP-224ENST00000621573 KRTAP19-5Q3LI72 72 aa2.99□□□□□ -1.93
TARDBP-224ENST00000621573 KRTAP19-7Q3SYF9 63 aa2.99□□□□□ -1.93
TARDBP-224ENST00000621573 KTN1-AS1Q86SY8 53 aa2.99□□□□□ -1.93
TARDBP-224ENST00000621573 SPRR2DP22532 72 aa2.98□□□□□ -1.93
TARDBP-224ENST00000621573 MT1EP04732 61 aa2.97□□□□□ -1.93
TARDBP-224ENST00000621573 KRTAP25-1Q3LHN0 102 aa2.97□□□□□ -1.93
TARDBP-224ENST00000621573 KRTAP2-1Q9BYU5 128 aa2.94□□□□□ -1.94
TARDBP-224ENST00000621573 KRTAP19-3Q7Z4W3 81 aa2.93□□□□□ -1.94
TARDBP-224ENST00000621573 KRTAP12-3P60328 96 aa2.89□□□□□ -1.95
TARDBP-224ENST00000621573 MT1GP13640 62 aa2.87□□□□□ -1.95
TARDBP-224ENST00000621573 MT1LQ93083 61 aa2.87□□□□□ -1.95
TARDBP-224ENST00000621573 MT1MQ8N339 61 aa2.82□□□□□ -1.96
TARDBP-224ENST00000621573 KRTAP5-8O75690 187 aa2.81□□□□□ -1.96
TARDBP-224ENST00000621573 GPR98Q8WXG9 6306 aa2.73□□□□□ -1.97
TARDBP-224ENST00000621573 KRTAP5-7Q6L8G8 165 aa2.7□□□□□ -1.98
TARDBP-224ENST00000621573 DSTQ03001 7570 aaKnown RBP2.7□□□□□ -1.98
TARDBP-224ENST00000621573 MUC19Q7Z5P9 8384 aa2.69□□□□□ -1.98
TARDBP-224ENST00000621573 MT4P47944 62 aa2.6□□□□□ -1.99
TARDBP-224ENST00000621573 LUZP6Q538Z0 58 aa2.54□□□□□ -2
TARDBP-224ENST00000621573 AHNAK2Q8IVF2 5795 aa2.52□□□□□ -2.01
TARDBP-224ENST00000621573 HMCN1Q96RW7 5635 aa2.52□□□□□ -2.01
TARDBP-224ENST00000621573 KRTAP5-10Q6L8G5 202 aa2.51□□□□□ -2.01
TARDBP-224ENST00000621573 KRTAP12-4P60329 112 aa2.5□□□□□ -2.01
TARDBP-224ENST00000621573 MT1AP04731 61 aa2.45□□□□□ -2.02
TARDBP-224ENST00000621573 KRTAP20-2Q3LI61 65 aa2.44□□□□□ -2.02
TARDBP-224ENST00000621573 KRTAP6-1Q3LI64 71 aa2.42□□□□□ -2.02
TARDBP-224ENST00000621573 SYNE1Q8NF91 8797 aaKnown RBP2.4□□□□□ -2.02
TARDBP-224ENST00000621573 KRTAP21-2Q3LI59 83 aa2.3□□□□□ -2.04
TARDBP-224ENST00000621573 KRTAP6-2Q3LI66 62 aa2.29□□□□□ -2.04
TARDBP-224ENST00000621573 MUC5ACP98088 5654 aa2.08□□□□□ -2.08
TARDBP-224ENST00000621573 AHNAKQ09666 5890 aaKnown RBP2.07□□□□□ -2.08
TARDBP-224ENST00000621573 MUC5BQ9HC84 5762 aaPredicted RBP2.07□□□□□ -2.08
TARDBP-224ENST00000621573 INE1O15225 51 aa1.95□□□□□ -2.1
TARDBP-224ENST00000621573 PRM1P04553 51 aa1.57□□□□□ -2.16
TARDBP-224ENST00000621573 PHGR1C9JFL3 82 aa1.5□□□□□ -2.17
TARDBP-224ENST00000621573 MUC16Q8WXI7 14507 aa1.17□□□□□ -2.22
TARDBP-224ENST00000621573 KRTAP21-1Q3LI58 79 aa1.11□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 7.8 ms