RNA–Protein interactions for RNA: ENST00000620879.4

GTF2I-218, Transcript of general transcription factor IIi, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene GTF2I, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2I-218ENST00000620879 USH2AO75445 5202 aa4.14□□□□□ -1.75
GTF2I-218ENST00000620879 KRTAP19-6Q3LI70 58 aa4.14□□□□□ -1.75
GTF2I-218ENST00000620879 MT1EP04732 61 aa4.13□□□□□ -1.75
GTF2I-218ENST00000620879 KRTAP19-3Q7Z4W3 81 aa4.13□□□□□ -1.75
GTF2I-218ENST00000620879 MT1LQ93083 61 aa4.13□□□□□ -1.75
GTF2I-218ENST00000620879 DSTQ03001 7570 aaKnown RBP4.1□□□□□ -1.75
GTF2I-218ENST00000620879 FCGBPQ9Y6R7 5405 aaPredicted RBP4.08□□□□□ -1.76
GTF2I-218ENST00000620879 KRTAP4-3Q9BYR4 195 aa4.02□□□□□ -1.77
GTF2I-218ENST00000620879 KRTAP19-7Q3SYF9 63 aa4□□□□□ -1.77
GTF2I-218ENST00000620879 SYNE2Q8WXH0 6885 aaKnown RBP3.99□□□□□ -1.77
GTF2I-218ENST00000620879 LCE2DQ5TA82 110 aaPredicted RBP3.98□□□□□ -1.77
GTF2I-218ENST00000620879 MT1MQ8N339 61 aa3.98□□□□□ -1.77
GTF2I-218ENST00000620879 KRTAP12-4P60329 112 aa3.97□□□□□ -1.77
GTF2I-218ENST00000620879 LOC100996750A0A140TA64 210 aa3.95□□□□□ -1.78
GTF2I-218ENST00000620879 KMT2DO14686 5537 aa3.92□□□□□ -1.78
GTF2I-218ENST00000620879 KRTAP9-6A0A140TA67 174 aa3.88□□□□□ -1.79
GTF2I-218ENST00000620879 LCE3DQ9BYE3 92 aa3.82□□□□□ -1.8
GTF2I-218ENST00000620879 MT4P47944 62 aa3.79□□□□□ -1.8
GTF2I-218ENST00000620879 MUC12Q9UKN1 5478 aa3.77□□□□□ -1.81
GTF2I-218ENST00000620879 MACF1Q9UPN3 7388 aaKnown RBP3.76□□□□□ -1.81
GTF2I-218ENST00000620879 LCE3EQ5T5B0 92 aa3.73□□□□□ -1.81
GTF2I-218ENST00000620879 SSPOA2VEC9 5147 aa3.72□□□□□ -1.81
GTF2I-218ENST00000620879 KRTAP9-7A8MTY7 169 aa3.68□□□□□ -1.82
GTF2I-218ENST00000620879 KRTAP9-6A8MVA2 160 aa3.68□□□□□ -1.82
GTF2I-218ENST00000620879 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.65□□□□□ -1.82
GTF2I-218ENST00000620879 MT3P25713 68 aa3.64□□□□□ -1.83
GTF2I-218ENST00000620879 KRTAP4-9Q9BYQ8 210 aa3.63□□□□□ -1.83
GTF2I-218ENST00000620879 LCE1AQ5T7P2 110 aa3.61□□□□□ -1.83
GTF2I-218ENST00000620879 LCE5AQ5TCM9 118 aa3.6□□□□□ -1.83
GTF2I-218ENST00000620879 MT1AP04731 61 aa3.59□□□□□ -1.84
GTF2I-218ENST00000620879 KRTAP6-3Q3LI67 103 aa3.58□□□□□ -1.84
GTF2I-218ENST00000620879 KRTAP2-3P0C7H8 128 aa3.55□□□□□ -1.84
GTF2I-218ENST00000620879 KRTAP2-4Q9BYR9 128 aa3.55□□□□□ -1.84
GTF2I-218ENST00000620879 KRTAP2-1Q9BYU5 128 aa3.55□□□□□ -1.84
GTF2I-218ENST00000620879 MDN1Q9NU22 5596 aa3.53□□□□□ -1.84
GTF2I-218ENST00000620879 KRTAP6-1Q3LI64 71 aa3.51□□□□□ -1.85
GTF2I-218ENST00000620879 LCE1DQ5T752 114 aa3.49□□□□□ -1.85
GTF2I-218ENST00000620879 LCE1BQ5T7P3 118 aa3.47□□□□□ -1.85
GTF2I-218ENST00000620879 KRTAP20-1Q3LI63 56 aa3.45□□□□□ -1.86
GTF2I-218ENST00000620879 PRM1P04553 51 aa3.41□□□□□ -1.86
GTF2I-218ENST00000620879 KRTAP6-2Q3LI66 62 aa3.4□□□□□ -1.86
GTF2I-218ENST00000620879 KRTAP2-2Q9BYT5 123 aa3.33□□□□□ -1.88
GTF2I-218ENST00000620879 KRTAP9-4Q9BYQ2 154 aa3.31□□□□□ -1.88
GTF2I-218ENST00000620879 KRTAP5-9P26371 169 aa3.27□□□□□ -1.89
GTF2I-218ENST00000620879 NEBP20929 6669 aa3.26□□□□□ -1.89
GTF2I-218ENST00000620879 LCE4AQ5TA78 99 aa3.24□□□□□ -1.89
GTF2I-218ENST00000620879 MUC19Q7Z5P9 8384 aa3.18□□□□□ -1.9
GTF2I-218ENST00000620879 KRTAP4-6Q9BYQ5 205 aa3.1□□□□□ -1.91
GTF2I-218ENST00000620879 GPR98Q8WXG9 6306 aa3.02□□□□□ -1.93
GTF2I-218ENST00000620879 KRTAP20-2Q3LI61 65 aa2.95□□□□□ -1.94
GTF2I-218ENST00000620879 KRTAP5-5Q701N2 237 aaPredicted RBP2.89□□□□□ -1.95
GTF2I-218ENST00000620879 LCE1EQ5T753 118 aa2.88□□□□□ -1.95
GTF2I-218ENST00000620879 MUC5ACP98088 5654 aa2.84□□□□□ -1.95
GTF2I-218ENST00000620879 LCE1CQ5T751 118 aa2.81□□□□□ -1.96
GTF2I-218ENST00000620879 LCE1FQ5T754 118 aa2.81□□□□□ -1.96
GTF2I-218ENST00000620879 HMCN1Q96RW7 5635 aa2.75□□□□□ -1.97
GTF2I-218ENST00000620879 KRTAP9-9Q9BYP9 154 aa2.73□□□□□ -1.97
GTF2I-218ENST00000620879 KRTAP5-4Q6L8H1 288 aa2.67□□□□□ -1.98
GTF2I-218ENST00000620879 KRTAP4-11Q9BYQ6 195 aa2.65□□□□□ -1.98
GTF2I-218ENST00000620879 KRTAP4-12Q9BQ66 201 aa2.58□□□□□ -2
GTF2I-218ENST00000620879 KRTAP4-2Q9BYR5 136 aa2.58□□□□□ -2
GTF2I-218ENST00000620879 KRTAP4-4Q9BYR3 166 aa2.56□□□□□ -2
GTF2I-218ENST00000620879 AHNAK2Q8IVF2 5795 aa2.55□□□□□ -2
GTF2I-218ENST00000620879 KRTAP5-3Q6L8H2 238 aa2.51□□□□□ -2.01
GTF2I-218ENST00000620879 KRTAP5-8O75690 187 aa2.32□□□□□ -2.04
GTF2I-218ENST00000620879 KRTAP5-2Q701N4 177 aa2.3□□□□□ -2.04
GTF2I-218ENST00000620879 AHNAKQ09666 5890 aaKnown RBP2.14□□□□□ -2.07
GTF2I-218ENST00000620879 MUC5BQ9HC84 5762 aaPredicted RBP2.14□□□□□ -2.07
GTF2I-218ENST00000620879 KRTAP5-10Q6L8G5 202 aa2.13□□□□□ -2.07
GTF2I-218ENST00000620879 KRTAP5-1Q6L8H4 278 aa2.08□□□□□ -2.08
GTF2I-218ENST00000620879 KRTAP5-11Q6L8G4 156 aa1.94□□□□□ -2.1
GTF2I-218ENST00000620879 KRTAP21-2Q3LI59 83 aa1.91□□□□□ -2.1
GTF2I-218ENST00000620879 PHGR1C9JFL3 82 aa1.82□□□□□ -2.12
GTF2I-218ENST00000620879 KRTAP21-1Q3LI58 79 aa1.78□□□□□ -2.12
GTF2I-218ENST00000620879 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.75□□□□□ -2.13
GTF2I-218ENST00000620879 KRTAP5-7Q6L8G8 165 aa1.7□□□□□ -2.14
GTF2I-218ENST00000620879 MUC16Q8WXI7 14507 aa1.19□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 41.1 ms