RNA–Protein interactions for RNA: ENST00000619160.4

PCSK6-218, Transcript of proprotein convertase subtilisin/kexin type 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCSK6, Length 3,093 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK6-218ENST00000619160 CRCT1Q9UGL9 99 aa7.58□□□□□ -1.2
PCSK6-218ENST00000619160 SSPOA2VEC9 5147 aa7.56□□□□□ -1.2
PCSK6-218ENST00000619160 MT1GP13640 62 aa7.53□□□□□ -1.2
PCSK6-218ENST00000619160 KRTAP12-4P60329 112 aa7.46□□□□□ -1.22
PCSK6-218ENST00000619160 MUC12Q9UKN1 5478 aa7.42□□□□□ -1.22
PCSK6-218ENST00000619160 FCGBPQ9Y6R7 5405 aaPredicted RBP7.38□□□□□ -1.23
PCSK6-218ENST00000619160 DSTQ03001 7570 aaKnown RBP7.34□□□□□ -1.23
PCSK6-218ENST00000619160 LCE2DQ5TA82 110 aaPredicted RBP7.29□□□□□ -1.24
PCSK6-218ENST00000619160 MT1MQ8N339 61 aa7.27□□□□□ -1.25
PCSK6-218ENST00000619160 KRTAP19-6Q3LI70 58 aa7.24□□□□□ -1.25
PCSK6-218ENST00000619160 KRTAP19-3Q7Z4W3 81 aa7.22□□□□□ -1.25
PCSK6-218ENST00000619160 SYNE1Q8NF91 8797 aaKnown RBP7.12□□□□□ -1.27
PCSK6-218ENST00000619160 LCE3BQ5TA77 95 aa7.1□□□□□ -1.27
PCSK6-218ENST00000619160 KRTAP4-9Q9BYQ8 210 aa7.08□□□□□ -1.28
PCSK6-218ENST00000619160 SPRR2FQ96RM1 72 aa6.97□□□□□ -1.29
PCSK6-218ENST00000619160 MACF1Q9UPN3 7388 aaKnown RBP6.93□□□□□ -1.3
PCSK6-218ENST00000619160 SYNE2Q8WXH0 6885 aaKnown RBP6.88□□□□□ -1.31
PCSK6-218ENST00000619160 LCE5AQ5TCM9 118 aa6.87□□□□□ -1.31
PCSK6-218ENST00000619160 OBSCNQ5VST9 7968 aa6.87□□□□□ -1.31
PCSK6-218ENST00000619160 KRTAP9-2Q9BYQ4 174 aa6.83□□□□□ -1.32
PCSK6-218ENST00000619160 KRTAP9-7A8MTY7 169 aa6.79□□□□□ -1.32
PCSK6-218ENST00000619160 KRTAP6-1Q3LI64 71 aa6.73□□□□□ -1.33
PCSK6-218ENST00000619160 PRM1P04553 51 aa6.72□□□□□ -1.33
PCSK6-218ENST00000619160 LCE3DQ9BYE3 92 aa6.68□□□□□ -1.34
PCSK6-218ENST00000619160 KRTAP9-6A0A140TA67 174 aa6.66□□□□□ -1.34
PCSK6-218ENST00000619160 MT1AP04731 61 aa6.63□□□□□ -1.35
PCSK6-218ENST00000619160 LCE3EQ5T5B0 92 aa6.6□□□□□ -1.35
PCSK6-218ENST00000619160 MDN1Q9NU22 5596 aa6.59□□□□□ -1.36
PCSK6-218ENST00000619160 KRTAP5-5Q701N2 237 aaPredicted RBP6.54□□□□□ -1.36
PCSK6-218ENST00000619160 LCE1AQ5T7P2 110 aa6.27□□□□□ -1.41
PCSK6-218ENST00000619160 KRTAP6-2Q3LI66 62 aa6.25□□□□□ -1.41
PCSK6-218ENST00000619160 KRTAP6-3Q3LI67 103 aa6.24□□□□□ -1.41
PCSK6-218ENST00000619160 SPRR2EP22531 72 aa6.17□□□□□ -1.42
PCSK6-218ENST00000619160 SPRR2BP35325 72 aa6.17□□□□□ -1.42
PCSK6-218ENST00000619160 SPRR2AP35326 72 aa6.17□□□□□ -1.42
PCSK6-218ENST00000619160 KRTAP9-4Q9BYQ2 154 aa6.12□□□□□ -1.43
PCSK6-218ENST00000619160 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.07□□□□□ -1.44
PCSK6-218ENST00000619160 KRTAP5-9P26371 169 aa5.99□□□□□ -1.45
PCSK6-218ENST00000619160 MT3P25713 68 aa5.9□□□□□ -1.46
PCSK6-218ENST00000619160 KRTAP2-2Q9BYT5 123 aa5.89□□□□□ -1.47
PCSK6-218ENST00000619160 SPRR2DP22532 72 aa5.88□□□□□ -1.47
PCSK6-218ENST00000619160 NEBP20929 6669 aa5.71□□□□□ -1.49
PCSK6-218ENST00000619160 LCE1EQ5T753 118 aa5.68□□□□□ -1.5
PCSK6-218ENST00000619160 LCE1DQ5T752 114 aa5.43□□□□□ -1.54
PCSK6-218ENST00000619160 MT4P47944 62 aa5.33□□□□□ -1.56
PCSK6-218ENST00000619160 KRTAP4-6Q9BYQ5 205 aa5.32□□□□□ -1.56
PCSK6-218ENST00000619160 MUC19Q7Z5P9 8384 aa5.32□□□□□ -1.56
PCSK6-218ENST00000619160 KRTAP5-4Q6L8H1 288 aa5.25□□□□□ -1.57
PCSK6-218ENST00000619160 KRTAP20-1Q3LI63 56 aa5.21□□□□□ -1.58
PCSK6-218ENST00000619160 HMCN1Q96RW7 5635 aa5.11□□□□□ -1.59
PCSK6-218ENST00000619160 KRTAP4-11Q9BYQ6 195 aa5.11□□□□□ -1.59
PCSK6-218ENST00000619160 KRTAP20-2Q3LI61 65 aa5.08□□□□□ -1.6
PCSK6-218ENST00000619160 MUC5ACP98088 5654 aa5.07□□□□□ -1.6
PCSK6-218ENST00000619160 KRTAP5-2Q701N4 177 aa4.97□□□□□ -1.61
PCSK6-218ENST00000619160 LCE1BQ5T7P3 118 aa4.94□□□□□ -1.62
PCSK6-218ENST00000619160 LCE4AQ5TA78 99 aa4.86□□□□□ -1.63
PCSK6-218ENST00000619160 KRTAP5-10Q6L8G5 202 aa4.75□□□□□ -1.65
PCSK6-218ENST00000619160 KRTAP5-3Q6L8H2 238 aa4.71□□□□□ -1.65
PCSK6-218ENST00000619160 KRTAP5-1Q6L8H4 278 aa4.54□□□□□ -1.68
PCSK6-218ENST00000619160 LCE1FQ5T754 118 aa4.47□□□□□ -1.69
PCSK6-218ENST00000619160 KRTAP4-2Q9BYR5 136 aa4.44□□□□□ -1.7
PCSK6-218ENST00000619160 LCE1CQ5T751 118 aa4.36□□□□□ -1.71
PCSK6-218ENST00000619160 GPR98Q8WXG9 6306 aa4.34□□□□□ -1.72
PCSK6-218ENST00000619160 KRTAP5-7Q6L8G8 165 aa4.31□□□□□ -1.72
PCSK6-218ENST00000619160 AHNAK2Q8IVF2 5795 aa4.31□□□□□ -1.72
PCSK6-218ENST00000619160 KRTAP21-2Q3LI59 83 aa4.25□□□□□ -1.73
PCSK6-218ENST00000619160 KRTAP4-4Q9BYR3 166 aa4.16□□□□□ -1.74
PCSK6-218ENST00000619160 KRTAP21-1Q3LI58 79 aa4.08□□□□□ -1.76
PCSK6-218ENST00000619160 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.05□□□□□ -1.76
PCSK6-218ENST00000619160 KRTAP5-8O75690 187 aa3.99□□□□□ -1.77
PCSK6-218ENST00000619160 MUC5BQ9HC84 5762 aaPredicted RBP3.93□□□□□ -1.78
PCSK6-218ENST00000619160 AHNAKQ09666 5890 aaKnown RBP3.87□□□□□ -1.79
PCSK6-218ENST00000619160 KRTAP4-12Q9BQ66 201 aa3.77□□□□□ -1.81
PCSK6-218ENST00000619160 KRTAP5-11Q6L8G4 156 aa3.69□□□□□ -1.82
PCSK6-218ENST00000619160 KRTAP9-9Q9BYP9 154 aa3.44□□□□□ -1.86
PCSK6-218ENST00000619160 PHGR1C9JFL3 82 aa3.23□□□□□ -1.89
PCSK6-218ENST00000619160 MUC16Q8WXI7 14507 aa2.19□□□□□ -2.06
Retrieved 77 of 20,778 RNA–protein pairs in 11.6 ms