RNA–Protein interactions for RNA: ENST00000619046.4

ATP6AP1-210, Transcript of ATPase H+ transporting accessory protein 1, humanhuman

TSL 1 (best) BASIC

Gene ATP6AP1, Length 2,823 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6AP1-210ENST00000619046 KRTAP2-4Q9BYR9 128 aa4.37□□□□□ -1.71
ATP6AP1-210ENST00000619046 KRTAP2-1Q9BYU5 128 aa4.37□□□□□ -1.71
ATP6AP1-210ENST00000619046 MT1LQ93083 61 aa4.31□□□□□ -1.72
ATP6AP1-210ENST00000619046 MT1EP04732 61 aa4.3□□□□□ -1.72
ATP6AP1-210ENST00000619046 KRTAP19-4Q3LI73 84 aa4.29□□□□□ -1.72
ATP6AP1-210ENST00000619046 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.27□□□□□ -1.73
ATP6AP1-210ENST00000619046 MACF1Q9UPN3 7388 aaKnown RBP4.27□□□□□ -1.73
ATP6AP1-210ENST00000619046 SYNE2Q8WXH0 6885 aaKnown RBP4.22□□□□□ -1.73
ATP6AP1-210ENST00000619046 KRTAP9-7A8MTY7 169 aa4.16□□□□□ -1.74
ATP6AP1-210ENST00000619046 LOC100996750A0A140TA64 210 aa4.08□□□□□ -1.76
ATP6AP1-210ENST00000619046 KRTAP4-3Q9BYR4 195 aa4.08□□□□□ -1.76
ATP6AP1-210ENST00000619046 KRTAP6-3Q3LI67 103 aa4.05□□□□□ -1.76
ATP6AP1-210ENST00000619046 MT1MQ8N339 61 aa4.01□□□□□ -1.77
ATP6AP1-210ENST00000619046 MT1GP13640 62 aa4□□□□□ -1.77
ATP6AP1-210ENST00000619046 MUC12Q9UKN1 5478 aa3.99□□□□□ -1.77
ATP6AP1-210ENST00000619046 KRTAP19-3Q7Z4W3 81 aa3.98□□□□□ -1.77
ATP6AP1-210ENST00000619046 SPRR2FQ96RM1 72 aa3.96□□□□□ -1.78
ATP6AP1-210ENST00000619046 KRTAP5-9P26371 169 aa3.94□□□□□ -1.78
ATP6AP1-210ENST00000619046 MDN1Q9NU22 5596 aa3.91□□□□□ -1.78
ATP6AP1-210ENST00000619046 NEBP20929 6669 aa3.86□□□□□ -1.79
ATP6AP1-210ENST00000619046 LCE5AQ5TCM9 118 aa3.86□□□□□ -1.79
ATP6AP1-210ENST00000619046 SPRR2EP22531 72 aa3.84□□□□□ -1.8
ATP6AP1-210ENST00000619046 SPRR2BP35325 72 aa3.84□□□□□ -1.8
ATP6AP1-210ENST00000619046 SPRR2AP35326 72 aa3.84□□□□□ -1.8
ATP6AP1-210ENST00000619046 KRTAP12-4P60329 112 aa3.8□□□□□ -1.8
ATP6AP1-210ENST00000619046 LCE1AQ5T7P2 110 aa3.79□□□□□ -1.8
ATP6AP1-210ENST00000619046 LCE3BQ5TA77 95 aa3.71□□□□□ -1.82
ATP6AP1-210ENST00000619046 SPRR2DP22532 72 aa3.7□□□□□ -1.82
ATP6AP1-210ENST00000619046 DSTQ03001 7570 aaKnown RBP3.69□□□□□ -1.82
ATP6AP1-210ENST00000619046 KRTAP4-9Q9BYQ8 210 aa3.69□□□□□ -1.82
ATP6AP1-210ENST00000619046 MT1AP04731 61 aa3.67□□□□□ -1.82
ATP6AP1-210ENST00000619046 KRTAP6-1Q3LI64 71 aa3.67□□□□□ -1.82
ATP6AP1-210ENST00000619046 KRTAP20-1Q3LI63 56 aa3.66□□□□□ -1.82
ATP6AP1-210ENST00000619046 KRTAP2-2Q9BYT5 123 aa3.65□□□□□ -1.83
ATP6AP1-210ENST00000619046 SYNE1Q8NF91 8797 aaKnown RBP3.59□□□□□ -1.83
ATP6AP1-210ENST00000619046 KRTAP5-5Q701N2 237 aaPredicted RBP3.59□□□□□ -1.84
ATP6AP1-210ENST00000619046 LCE3DQ9BYE3 92 aa3.52□□□□□ -1.85
ATP6AP1-210ENST00000619046 LCE3EQ5T5B0 92 aa3.48□□□□□ -1.85
ATP6AP1-210ENST00000619046 LCE4AQ5TA78 99 aa3.44□□□□□ -1.86
ATP6AP1-210ENST00000619046 PRM1P04553 51 aa3.39□□□□□ -1.87
ATP6AP1-210ENST00000619046 KRTAP9-4Q9BYQ2 154 aa3.39□□□□□ -1.87
ATP6AP1-210ENST00000619046 LCE1EQ5T753 118 aa3.38□□□□□ -1.87
ATP6AP1-210ENST00000619046 KRTAP6-2Q3LI66 62 aa3.29□□□□□ -1.88
ATP6AP1-210ENST00000619046 KRTAP9-9Q9BYP9 154 aa3.26□□□□□ -1.89
ATP6AP1-210ENST00000619046 OBSCNQ5VST9 7968 aa3.26□□□□□ -1.89
ATP6AP1-210ENST00000619046 MT4P47944 62 aa3.25□□□□□ -1.89
ATP6AP1-210ENST00000619046 LCE1DQ5T752 114 aa3.22□□□□□ -1.89
ATP6AP1-210ENST00000619046 KRTAP5-4Q6L8H1 288 aa3.21□□□□□ -1.9
ATP6AP1-210ENST00000619046 MT3P25713 68 aa3.2□□□□□ -1.9
ATP6AP1-210ENST00000619046 HMCN1Q96RW7 5635 aa3.17□□□□□ -1.9
ATP6AP1-210ENST00000619046 LCE1FQ5T754 118 aa3.16□□□□□ -1.9
ATP6AP1-210ENST00000619046 KRTAP4-6Q9BYQ5 205 aa3.16□□□□□ -1.9
ATP6AP1-210ENST00000619046 KRTAP20-2Q3LI61 65 aa3.05□□□□□ -1.92
ATP6AP1-210ENST00000619046 KRTAP4-12Q9BQ66 201 aa2.98□□□□□ -1.93
ATP6AP1-210ENST00000619046 AHNAK2Q8IVF2 5795 aa2.95□□□□□ -1.94
ATP6AP1-210ENST00000619046 GPR98Q8WXG9 6306 aa2.95□□□□□ -1.94
ATP6AP1-210ENST00000619046 KRTAP5-3Q6L8H2 238 aa2.93□□□□□ -1.94
ATP6AP1-210ENST00000619046 KRTAP5-2Q701N4 177 aa2.92□□□□□ -1.94
ATP6AP1-210ENST00000619046 KRTAP5-10Q6L8G5 202 aa2.83□□□□□ -1.96
ATP6AP1-210ENST00000619046 MUC5ACP98088 5654 aa2.79□□□□□ -1.96
ATP6AP1-210ENST00000619046 MUC19Q7Z5P9 8384 aa2.78□□□□□ -1.96
ATP6AP1-210ENST00000619046 KRTAP4-11Q9BYQ6 195 aa2.73□□□□□ -1.97
ATP6AP1-210ENST00000619046 KRTAP5-7Q6L8G8 165 aa2.67□□□□□ -1.98
ATP6AP1-210ENST00000619046 KRTAP5-8O75690 187 aa2.62□□□□□ -1.99
ATP6AP1-210ENST00000619046 KRTAP5-1Q6L8H4 278 aa2.6□□□□□ -1.99
ATP6AP1-210ENST00000619046 LCE1BQ5T7P3 118 aa2.53□□□□□ -2
ATP6AP1-210ENST00000619046 KRTAP4-2Q9BYR5 136 aa2.53□□□□□ -2
ATP6AP1-210ENST00000619046 LCE1CQ5T751 118 aa2.48□□□□□ -2.01
ATP6AP1-210ENST00000619046 MUC5BQ9HC84 5762 aaPredicted RBP2.41□□□□□ -2.02
ATP6AP1-210ENST00000619046 KRTAP21-2Q3LI59 83 aa2.39□□□□□ -2.03
ATP6AP1-210ENST00000619046 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.39□□□□□ -2.03
ATP6AP1-210ENST00000619046 AHNAKQ09666 5890 aaKnown RBP2.34□□□□□ -2.03
ATP6AP1-210ENST00000619046 KRTAP21-1Q3LI58 79 aa2.19□□□□□ -2.06
ATP6AP1-210ENST00000619046 KRTAP5-11Q6L8G4 156 aa2.13□□□□□ -2.07
ATP6AP1-210ENST00000619046 KRTAP4-4Q9BYR3 166 aa2.13□□□□□ -2.07
ATP6AP1-210ENST00000619046 PHGR1C9JFL3 82 aa1.85□□□□□ -2.11
ATP6AP1-210ENST00000619046 MUC16Q8WXI7 14507 aa1.29□□□□□ -2.2
Retrieved 77 of 20,778 RNA–protein pairs in 541.7 ms