RNA–Protein interactions for RNA: ENST00000618449.4

CPEB1-216, Transcript of cytoplasmic polyadenylation element binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene CPEB1, Length 2,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB1-216ENST00000618449 CRCT1Q9UGL9 99 aa4.14□□□□□ -1.75
CPEB1-216ENST00000618449 KRTAP9-9Q9BYP9 154 aa4.12□□□□□ -1.75
CPEB1-216ENST00000618449 KRTAP9-4Q9BYQ2 154 aa4.12□□□□□ -1.75
CPEB1-216ENST00000618449 MACF1Q9UPN3 7388 aaKnown RBP4.11□□□□□ -1.75
CPEB1-216ENST00000618449 MT1EP04732 61 aa4.05□□□□□ -1.76
CPEB1-216ENST00000618449 KRTAP4-7Q9BYR0 210 aa4.04□□□□□ -1.76
CPEB1-216ENST00000618449 SYNE2Q8WXH0 6885 aaKnown RBP4.03□□□□□ -1.76
CPEB1-216ENST00000618449 LCE3CQ5T5A8 94 aa4.03□□□□□ -1.76
CPEB1-216ENST00000618449 LCE1DQ5T752 114 aa4□□□□□ -1.77
CPEB1-216ENST00000618449 MUC12Q9UKN1 5478 aa3.99□□□□□ -1.77
CPEB1-216ENST00000618449 MT1LQ93083 61 aa3.98□□□□□ -1.77
CPEB1-216ENST00000618449 SPRR2FQ96RM1 72 aa3.94□□□□□ -1.78
CPEB1-216ENST00000618449 KRTAP4-9Q9BYQ8 210 aa3.91□□□□□ -1.78
CPEB1-216ENST00000618449 KRTAP19-4Q3LI73 84 aa3.89□□□□□ -1.79
CPEB1-216ENST00000618449 KRTAP19-3Q7Z4W3 81 aa3.88□□□□□ -1.79
CPEB1-216ENST00000618449 KRTAP9-6A8MVA2 160 aa3.86□□□□□ -1.79
CPEB1-216ENST00000618449 KRTAP5-9P26371 169 aa3.86□□□□□ -1.79
CPEB1-216ENST00000618449 MT1GP13640 62 aa3.84□□□□□ -1.8
CPEB1-216ENST00000618449 KRTAP9-7A8MTY7 169 aa3.83□□□□□ -1.8
CPEB1-216ENST00000618449 MDN1Q9NU22 5596 aa3.83□□□□□ -1.8
CPEB1-216ENST00000618449 KRTAP4-2Q9BYR5 136 aa3.82□□□□□ -1.8
CPEB1-216ENST00000618449 MT1MQ8N339 61 aa3.81□□□□□ -1.8
CPEB1-216ENST00000618449 LCE5AQ5TCM9 118 aa3.81□□□□□ -1.8
CPEB1-216ENST00000618449 KRTAP4-3Q9BYR4 195 aa3.78□□□□□ -1.8
CPEB1-216ENST00000618449 LCE1AQ5T7P2 110 aa3.76□□□□□ -1.81
CPEB1-216ENST00000618449 KRTAP6-3Q3LI67 103 aa3.75□□□□□ -1.81
CPEB1-216ENST00000618449 DSTQ03001 7570 aaKnown RBP3.72□□□□□ -1.81
CPEB1-216ENST00000618449 SPRR2EP22531 72 aa3.71□□□□□ -1.82
CPEB1-216ENST00000618449 SPRR2BP35325 72 aa3.71□□□□□ -1.82
CPEB1-216ENST00000618449 SPRR2AP35326 72 aa3.71□□□□□ -1.82
CPEB1-216ENST00000618449 KRTAP4-11Q9BYQ6 195 aa3.71□□□□□ -1.82
CPEB1-216ENST00000618449 KRTAP2-3P0C7H8 128 aa3.68□□□□□ -1.82
CPEB1-216ENST00000618449 KRTAP2-4Q9BYR9 128 aa3.68□□□□□ -1.82
CPEB1-216ENST00000618449 KRTAP2-1Q9BYU5 128 aa3.68□□□□□ -1.82
CPEB1-216ENST00000618449 KRTAP5-3Q6L8H2 238 aa3.59□□□□□ -1.84
CPEB1-216ENST00000618449 SPRR2DP22532 72 aa3.57□□□□□ -1.84
CPEB1-216ENST00000618449 NEBP20929 6669 aa3.57□□□□□ -1.84
CPEB1-216ENST00000618449 LCE4AQ5TA78 99 aa3.44□□□□□ -1.86
CPEB1-216ENST00000618449 KRTAP5-5Q701N2 237 aaPredicted RBP3.43□□□□□ -1.86
CPEB1-216ENST00000618449 KRTAP20-1Q3LI63 56 aa3.39□□□□□ -1.87
CPEB1-216ENST00000618449 MT1AP04731 61 aa3.37□□□□□ -1.87
CPEB1-216ENST00000618449 KRTAP6-1Q3LI64 71 aa3.37□□□□□ -1.87
CPEB1-216ENST00000618449 SYNE1Q8NF91 8797 aaKnown RBP3.32□□□□□ -1.88
CPEB1-216ENST00000618449 KRTAP12-4P60329 112 aa3.32□□□□□ -1.88
CPEB1-216ENST00000618449 KRTAP5-4Q6L8H1 288 aa3.24□□□□□ -1.89
CPEB1-216ENST00000618449 KRTAP2-2Q9BYT5 123 aa3.2□□□□□ -1.9
CPEB1-216ENST00000618449 MT4P47944 62 aa3.12□□□□□ -1.91
CPEB1-216ENST00000618449 KRTAP6-2Q3LI66 62 aa3.09□□□□□ -1.91
CPEB1-216ENST00000618449 LCE3DQ9BYE3 92 aa3.08□□□□□ -1.92
CPEB1-216ENST00000618449 HMCN1Q96RW7 5635 aa3.05□□□□□ -1.92
CPEB1-216ENST00000618449 MT3P25713 68 aa3.04□□□□□ -1.92
CPEB1-216ENST00000618449 KRTAP20-2Q3LI61 65 aa3.03□□□□□ -1.92
CPEB1-216ENST00000618449 LCE3EQ5T5B0 92 aa3.02□□□□□ -1.93
CPEB1-216ENST00000618449 PRM1P04553 51 aa2.97□□□□□ -1.93
CPEB1-216ENST00000618449 OBSCNQ5VST9 7968 aa2.95□□□□□ -1.94
CPEB1-216ENST00000618449 KRTAP5-2Q701N4 177 aa2.94□□□□□ -1.94
CPEB1-216ENST00000618449 GPR98Q8WXG9 6306 aa2.86□□□□□ -1.95
CPEB1-216ENST00000618449 LCE1EQ5T753 118 aa2.78□□□□□ -1.96
CPEB1-216ENST00000618449 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.67□□□□□ -1.98
CPEB1-216ENST00000618449 KRTAP5-7Q6L8G8 165 aa2.65□□□□□ -1.98
CPEB1-216ENST00000618449 AHNAK2Q8IVF2 5795 aa2.65□□□□□ -1.99
CPEB1-216ENST00000618449 KRTAP5-10Q6L8G5 202 aa2.65□□□□□ -1.99
CPEB1-216ENST00000618449 KRTAP5-1Q6L8H4 278 aa2.55□□□□□ -2
CPEB1-216ENST00000618449 KRTAP5-8O75690 187 aa2.51□□□□□ -2.01
CPEB1-216ENST00000618449 MUC5ACP98088 5654 aa2.51□□□□□ -2.01
CPEB1-216ENST00000618449 LCE1BQ5T7P3 118 aa2.5□□□□□ -2.01
CPEB1-216ENST00000618449 LCE1FQ5T754 118 aa2.49□□□□□ -2.01
CPEB1-216ENST00000618449 LCE1CQ5T751 118 aa2.45□□□□□ -2.02
CPEB1-216ENST00000618449 KRTAP5-11Q6L8G4 156 aa2.44□□□□□ -2.02
CPEB1-216ENST00000618449 AHNAKQ09666 5890 aaKnown RBP2.35□□□□□ -2.03
CPEB1-216ENST00000618449 MUC5BQ9HC84 5762 aaPredicted RBP2.23□□□□□ -2.05
CPEB1-216ENST00000618449 KRTAP21-2Q3LI59 83 aa2.2□□□□□ -2.06
CPEB1-216ENST00000618449 KRTAP4-4Q9BYR3 166 aa2.16□□□□□ -2.06
CPEB1-216ENST00000618449 KRTAP21-1Q3LI58 79 aa1.94□□□□□ -2.1
CPEB1-216ENST00000618449 MUC19Q7Z5P9 8384 aa1.92□□□□□ -2.1
CPEB1-216ENST00000618449 PHGR1C9JFL3 82 aa1.85□□□□□ -2.11
CPEB1-216ENST00000618449 MUC16Q8WXI7 14507 aa1.17□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 212.3 ms